RNA–Protein interactions for RNA: ENST00000524334.1

HDAC2-217, Transcript of histone deacetylase 2, humanhuman

TSL 4

Gene HDAC2, Length 570 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC2-217ENST00000524334 ATF5Q9Y2D1 282 aaPredicted RBP17.09■□□□□ 0.33
HDAC2-217ENST00000524334 LRP5O75197 1615 aa17.08■□□□□ 0.32
HDAC2-217ENST00000524334 PNPLA7Q6ZV29 1317 aa17.08■□□□□ 0.32
HDAC2-217ENST00000524334 NEFMP07197 916 aa17.08■□□□□ 0.32
HDAC2-217ENST00000524334 AK7Q96M32 723 aa17.08■□□□□ 0.32
HDAC2-217ENST00000524334 RBM42Q9BTD8 480 aaKnown RBP17.08■□□□□ 0.32
HDAC2-217ENST00000524334 PAPPAQ13219 1627 aa17.07■□□□□ 0.32
HDAC2-217ENST00000524334 MYBBP1AQ9BQG0 1328 aaKnown RBP17.07■□□□□ 0.32
HDAC2-217ENST00000524334 TOGARAM1Q9Y4F4 1720 aa17.07■□□□□ 0.32
HDAC2-217ENST00000524334 MAP3K5Q99683 1374 aa17.06■□□□□ 0.32
HDAC2-217ENST00000524334 ZNF316A6NFI3 1004 aaPredicted RBP17.06■□□□□ 0.32
HDAC2-217ENST00000524334 MSH5O43196 834 aa17.06■□□□□ 0.32
HDAC2-217ENST00000524334 PTCD1O75127 700 aaKnown RBP17.06■□□□□ 0.32
HDAC2-217ENST00000524334 ITPK1Q13572 414 aa17.06■□□□□ 0.32
HDAC2-217ENST00000524334 LY75O60449 1722 aa17.05■□□□□ 0.32
HDAC2-217ENST00000524334 PTGER2P43116 358 aa17.05■□□□□ 0.32
HDAC2-217ENST00000524334 TEFQ10587 303 aa17.05■□□□□ 0.32
HDAC2-217ENST00000524334 LINC00116Q8NCU8 138 aa17.05■□□□□ 0.32
HDAC2-217ENST00000524334 IL17REQ8NFR9 667 aa17.05■□□□□ 0.32
HDAC2-217ENST00000524334 HTATSF1O43719 755 aaKnown RBP17.04■□□□□ 0.32
HDAC2-217ENST00000524334 RC3H1Q5TC82 1133 aaKnown RBP17.04■□□□□ 0.32
HDAC2-217ENST00000524334 COL23A1Q86Y22 540 aaPredicted RBP17.04■□□□□ 0.32
HDAC2-217ENST00000524334 RTF1Q92541 710 aaKnown RBP17.04■□□□□ 0.32
HDAC2-217ENST00000524334 SLC4A9Q96Q91 983 aa17.04■□□□□ 0.32
HDAC2-217ENST00000524334 PRKRIP1Q9H875 184 aaPredicted RBP17.04■□□□□ 0.32
HDAC2-217ENST00000524334 SSFA2P28290 1259 aa17.03■□□□□ 0.32
HDAC2-217ENST00000524334 POLD1P28340 1107 aa17.02■□□□□ 0.32
HDAC2-217ENST00000524334 SGIP1Q9BQI5 828 aa17.02■□□□□ 0.32
HDAC2-217ENST00000524334 KAT6BQ8WYB5 2073 aa17.01■□□□□ 0.31
HDAC2-217ENST00000524334 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.01■□□□□ 0.31
HDAC2-217ENST00000524334 GNPATO15228 680 aa17.01■□□□□ 0.31
HDAC2-217ENST00000524334 ARXQ96QS3 562 aa17.01■□□□□ 0.31
HDAC2-217ENST00000524334 RTCBQ9Y3I0 505 aaKnown RBP17.01■□□□□ 0.31
HDAC2-217ENST00000524334 ITGB4P16144 1822 aa17■□□□□ 0.31
HDAC2-217ENST00000524334 CASZ1Q86V15 1759 aa17■□□□□ 0.31
HDAC2-217ENST00000524334 TTC5Q8N0Z6 440 aa17■□□□□ 0.31
HDAC2-217ENST00000524334 VSIG10Q8N0Z9 540 aa17■□□□□ 0.31
HDAC2-217ENST00000524334 PLEKHF1Q96S99 279 aa17■□□□□ 0.31
HDAC2-217ENST00000524334 CEMIPQ8WUJ3 1361 aa17■□□□□ 0.31
HDAC2-217ENST00000524334 CNTNAP4Q9C0A0 1308 aa16.99■□□□□ 0.31
HDAC2-217ENST00000524334 PHF14O94880 888 aa16.99■□□□□ 0.31
HDAC2-217ENST00000524334 SLC39A6Q13433 755 aa16.99■□□□□ 0.31
HDAC2-217ENST00000524334 TRAPPC3LQ5T215 181 aa16.99■□□□□ 0.31
HDAC2-217ENST00000524334 MRC1P22897 1456 aa16.99■□□□□ 0.31
HDAC2-217ENST00000524334 MAPK8IP3Q9UPT6 1336 aa16.98■□□□□ 0.31
HDAC2-217ENST00000524334 RPS6KA4O75676 772 aa16.98■□□□□ 0.31
HDAC2-217ENST00000524334 ADRA2BP18089 450 aa16.98■□□□□ 0.31
HDAC2-217ENST00000524334 ZNF790Q6PG37 636 aa16.98■□□□□ 0.31
HDAC2-217ENST00000524334 WDR43Q15061 677 aaKnown RBP eCLIP16.97■□□□□ 0.31
HDAC2-217ENST00000524334 NFE2L2Q16236 605 aa16.97■□□□□ 0.31
HDAC2-217ENST00000524334 BTBD11A6QL63 1104 aa16.96■□□□□ 0.31
HDAC2-217ENST00000524334 CRKLP46109 303 aaKnown RBP16.96■□□□□ 0.31
HDAC2-217ENST00000524334 MCM10Q7L590 875 aa16.96■□□□□ 0.31
HDAC2-217ENST00000524334 AMIGO3Q86WK7 504 aa16.96■□□□□ 0.31
HDAC2-217ENST00000524334 TEX13AQ9BXU3 409 aaPredicted RBP16.96■□□□□ 0.31
HDAC2-217ENST00000524334 C4BP0C0L5 1744 aa16.96■□□□□ 0.3
HDAC2-217ENST00000524334 C5P01031 1676 aa16.95■□□□□ 0.3
HDAC2-217ENST00000524334 DCAF8L1A6NGE4 600 aa16.95■□□□□ 0.3
HDAC2-217ENST00000524334 DNAJC10Q8IXB1 793 aa16.95■□□□□ 0.3
HDAC2-217ENST00000524334 FHDC1Q9C0D6 1143 aaPredicted RBP16.95■□□□□ 0.3
HDAC2-217ENST00000524334 ADAMTS7Q9UKP4 1686 aa16.94■□□□□ 0.3
HDAC2-217ENST00000524334 STARD3NLO95772 234 aa16.94■□□□□ 0.3
HDAC2-217ENST00000524334 CYP19A1P11511 503 aaPredicted RBP16.94■□□□□ 0.3
HDAC2-217ENST00000524334 RFC4P35249 363 aa16.94■□□□□ 0.3
HDAC2-217ENST00000524334 TAF7Q15545 349 aaPredicted RBP16.94■□□□□ 0.3
HDAC2-217ENST00000524334 SMIM5Q71RC9 77 aa16.94■□□□□ 0.3
HDAC2-217ENST00000524334 ARHGEF1Q92888 912 aaKnown RBP16.94■□□□□ 0.3
HDAC2-217ENST00000524334 ZNF496Q96IT1 587 aaPredicted RBP16.94■□□□□ 0.3
HDAC2-217ENST00000524334 FMNL2Q96PY5 1086 aa16.94■□□□□ 0.3
HDAC2-217ENST00000524334 SYT17Q9BSW7 474 aa16.94■□□□□ 0.3
HDAC2-217ENST00000524334 CCDC87Q9NVE4 849 aa16.94■□□□□ 0.3
HDAC2-217ENST00000524334 ZNF831Q5JPB2 1677 aa16.94■□□□□ 0.3
HDAC2-217ENST00000524334 DCTN1Q14203 1278 aa16.93■□□□□ 0.3
HDAC2-217ENST00000524334 MSL1Q68DK7 614 aa16.93■□□□□ 0.3
HDAC2-217ENST00000524334 INTS5Q6P9B9 1019 aaKnown RBP16.93■□□□□ 0.3
HDAC2-217ENST00000524334 NLGN1Q8N2Q7 840 aa16.93■□□□□ 0.3
HDAC2-217ENST00000524334 QSER1Q2KHR3 1735 aa16.93■□□□□ 0.3
HDAC2-217ENST00000524334 SCN11AQ9UI33 1791 aa16.92■□□□□ 0.3
HDAC2-217ENST00000524334 PNISRQ8TF01 805 aaKnown RBP16.92■□□□□ 0.3
HDAC2-217ENST00000524334 ADAMTS8Q9UP79 889 aa16.92■□□□□ 0.3
HDAC2-217ENST00000524334 ANP32CO43423 234 aa16.91■□□□□ 0.3
HDAC2-217ENST00000524334 RUNDC1Q96C34 613 aa16.91■□□□□ 0.3
HDAC2-217ENST00000524334 HEG1Q9ULI3 1381 aa16.9■□□□□ 0.3
HDAC2-217ENST00000524334 RIPK4P57078 832 aa16.9■□□□□ 0.3
HDAC2-217ENST00000524334 LMOD3Q0VAK6 560 aa16.9■□□□□ 0.3
HDAC2-217ENST00000524334 KCPQ6ZWJ8 1503 aa16.9■□□□□ 0.3
HDAC2-217ENST00000524334 TMPOP42166 694 aaKnown RBP16.89■□□□□ 0.29
HDAC2-217ENST00000524334 KCNQ3O43525 872 aa16.88■□□□□ 0.29
HDAC2-217ENST00000524334 SNRPA1P09661 255 aaKnown RBP16.88■□□□□ 0.29
HDAC2-217ENST00000524334 CD2APQ9Y5K6 639 aa16.88■□□□□ 0.29
HDAC2-217ENST00000524334 TAF1LQ8IZX4 1826 aa16.88■□□□□ 0.29
HDAC2-217ENST00000524334 ZPR1O75312 459 aa16.87■□□□□ 0.29
HDAC2-217ENST00000524334 GYS1P13807 737 aa16.87■□□□□ 0.29
HDAC2-217ENST00000524334 CCDC146Q8IYE0 955 aa16.87■□□□□ 0.29
HDAC2-217ENST00000524334 KLHL34Q8N239 644 aa16.87■□□□□ 0.29
HDAC2-217ENST00000524334 SOS1Q07889 1333 aaPredicted RBP16.87■□□□□ 0.29
HDAC2-217ENST00000524334 CANXP27824 592 aaKnown RBP16.86■□□□□ 0.29
HDAC2-217ENST00000524334 NPM2Q86SE8 214 aaKnown RBP16.86■□□□□ 0.29
HDAC2-217ENST00000524334 ZBTB1Q9Y2K1 713 aa16.86■□□□□ 0.29
HDAC2-217ENST00000524334 A0A087WZG4 1122 aa16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms