RNA–Protein interactions for RNA: ENST00000524317.1

SCUBE2-208, Transcript of signal peptide, CUB domain and EGF like domain containing 2, humanhuman

TSL 2

Gene SCUBE2, Length 2,322 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE2-208ENST00000524317 MIS18AQ9NYP9 233 aa14.72□□□□□ -0.05
SCUBE2-208ENST00000524317 TMCO4Q5TGY1 634 aa14.72□□□□□ -0.05
SCUBE2-208ENST00000524317 API5Q9BZZ5 524 aaKnown RBP14.72□□□□□ -0.05
SCUBE2-208ENST00000524317 ZMYND10O75800 440 aa14.71□□□□□ -0.05
SCUBE2-208ENST00000524317 TRAIPQ9BWF2 469 aa14.71□□□□□ -0.05
SCUBE2-208ENST00000524317 TSPYL4Q9UJ04 414 aa14.71□□□□□ -0.05
SCUBE2-208ENST00000524317 GNAT3A8MTJ3 354 aa14.7□□□□□ -0.06
SCUBE2-208ENST00000524317 SMC5Q8IY18 1101 aa14.7□□□□□ -0.06
SCUBE2-208ENST00000524317 USHBP1Q8N6Y0 703 aa14.7□□□□□ -0.06
SCUBE2-208ENST00000524317 CHMP4BQ9H444 224 aaKnown RBP14.7□□□□□ -0.06
SCUBE2-208ENST00000524317 C1orf167Q5SNV9 1468 aa14.7□□□□□ -0.06
SCUBE2-208ENST00000524317 GCP02774 474 aa14.7□□□□□ -0.06
SCUBE2-208ENST00000524317 NBPF6Q5VWK0 638 aa14.69□□□□□ -0.06
SCUBE2-208ENST00000524317 NBPF4Q96M43 638 aa14.69□□□□□ -0.06
SCUBE2-208ENST00000524317 MAP3K5Q99683 1374 aa14.68□□□□□ -0.06
SCUBE2-208ENST00000524317 MSH6P52701 1360 aa14.68□□□□□ -0.06
SCUBE2-208ENST00000524317 KRT28Q7Z3Y7 464 aa14.67□□□□□ -0.06
SCUBE2-208ENST00000524317 ARHGEF25Q86VW2 580 aa14.67□□□□□ -0.06
SCUBE2-208ENST00000524317 IL17REQ8NFR9 667 aa14.67□□□□□ -0.06
SCUBE2-208ENST00000524317 TMEM94Q12767 1356 aa14.67□□□□□ -0.06
SCUBE2-208ENST00000524317 USP19O94966 1318 aa14.66□□□□□ -0.06
SCUBE2-208ENST00000524317 GZF1Q9H116 711 aaPredicted RBP14.66□□□□□ -0.06
SCUBE2-208ENST00000524317 RGS12O14924 1447 aa14.66□□□□□ -0.06
SCUBE2-208ENST00000524317 PTPRCP08575 1304 aa14.65□□□□□ -0.06
SCUBE2-208ENST00000524317 SLIT3O75094 1523 aa14.65□□□□□ -0.06
SCUBE2-208ENST00000524317 ATF3P18847 181 aa14.65□□□□□ -0.06
SCUBE2-208ENST00000524317 INTS3Q68E01 1043 aaKnown RBP14.65□□□□□ -0.06
SCUBE2-208ENST00000524317 CADPS2Q86UW7 1296 aa14.65□□□□□ -0.06
SCUBE2-208ENST00000524317 WDR70Q9NW82 654 aa14.65□□□□□ -0.06
SCUBE2-208ENST00000524317 NUCB1Q02818 461 aa14.65□□□□□ -0.06
SCUBE2-208ENST00000524317 DDRGK1Q96HY6 314 aa14.65□□□□□ -0.06
SCUBE2-208ENST00000524317 LRRC59Q96AG4 307 aaKnown RBP14.64□□□□□ -0.07
SCUBE2-208ENST00000524317 BRPF3Q9ULD4 1205 aa14.64□□□□□ -0.07
SCUBE2-208ENST00000524317 SEC24BO95487 1268 aa14.64□□□□□ -0.07
SCUBE2-208ENST00000524317 HSPA2P54652 639 aa14.64□□□□□ -0.07
SCUBE2-208ENST00000524317 MST1RQ04912 1400 aa14.64□□□□□ -0.07
SCUBE2-208ENST00000524317 SIRT2Q8IXJ6 389 aa14.64□□□□□ -0.07
SCUBE2-208ENST00000524317 TAF7Q15545 349 aaPredicted RBP14.63□□□□□ -0.07
SCUBE2-208ENST00000524317 BABAM1Q9NWV8 329 aa14.63□□□□□ -0.07
SCUBE2-208ENST00000524317 NCOA3Q9Y6Q9 1424 aa14.63□□□□□ -0.07
SCUBE2-208ENST00000524317 DCCP43146 1447 aa14.62□□□□□ -0.07
SCUBE2-208ENST00000524317 LRRC37A3O60309 1634 aa14.62□□□□□ -0.07
SCUBE2-208ENST00000524317 SEMA3EO15041 775 aa14.62□□□□□ -0.07
SCUBE2-208ENST00000524317 PLCD3Q8N3E9 789 aa14.62□□□□□ -0.07
SCUBE2-208ENST00000524317 GCC1Q96CN9 775 aa14.62□□□□□ -0.07
SCUBE2-208ENST00000524317 KDM4CQ9H3R0 1056 aa14.62□□□□□ -0.07
SCUBE2-208ENST00000524317 CHD1LQ86WJ1 897 aa14.61□□□□□ -0.07
SCUBE2-208ENST00000524317 ANKRD24Q8TF21 1146 aa14.61□□□□□ -0.07
SCUBE2-208ENST00000524317 AXIN2Q9Y2T1 843 aa14.61□□□□□ -0.07
SCUBE2-208ENST00000524317 CEMIPQ8WUJ3 1361 aa14.61□□□□□ -0.07
SCUBE2-208ENST00000524317 PHRF1Q9P1Y6 1649 aaKnown RBP14.61□□□□□ -0.07
SCUBE2-208ENST00000524317 G2E3Q7L622 706 aa14.6□□□□□ -0.07
SCUBE2-208ENST00000524317 DDX17Q92841 729 aaKnown RBP14.6□□□□□ -0.07
SCUBE2-208ENST00000524317 LNPKQ9C0E8 428 aa14.6□□□□□ -0.07
SCUBE2-208ENST00000524317 LTN1O94822 1766 aa14.6□□□□□ -0.07
SCUBE2-208ENST00000524317 NCAPD2Q15021 1401 aa14.6□□□□□ -0.07
SCUBE2-208ENST00000524317 KIF1AQ12756 1690 aa14.59□□□□□ -0.07
SCUBE2-208ENST00000524317 POLA2Q14181 598 aa14.59□□□□□ -0.07
SCUBE2-208ENST00000524317 LGR6Q9HBX8 967 aa14.59□□□□□ -0.07
SCUBE2-208ENST00000524317 TRPM3Q9HCF6 1732 aaPredicted RBP14.59□□□□□ -0.07
SCUBE2-208ENST00000524317 SOS1Q07889 1333 aaPredicted RBP14.59□□□□□ -0.07
SCUBE2-208ENST00000524317 CCDC30Q5VVM6 783 aa14.59□□□□□ -0.07
SCUBE2-208ENST00000524317 STK31Q9BXU1 1019 aa14.59□□□□□ -0.07
SCUBE2-208ENST00000524317 AMOTQ4VCS5 1084 aa14.58□□□□□ -0.08
SCUBE2-208ENST00000524317 PLEKHO1Q53GL0 409 aaPredicted RBP14.58□□□□□ -0.08
SCUBE2-208ENST00000524317 AKAP4Q5JQC9 854 aa14.58□□□□□ -0.08
SCUBE2-208ENST00000524317 ANKRD45Q5TZF3 282 aa14.58□□□□□ -0.08
SCUBE2-208ENST00000524317 BRD2P25440 801 aaKnown RBP14.58□□□□□ -0.08
SCUBE2-208ENST00000524317 ZC3H6P61129 1189 aaKnown RBP14.58□□□□□ -0.08
SCUBE2-208ENST00000524317 ZNF530Q6P9A1 599 aaPredicted RBP14.58□□□□□ -0.08
SCUBE2-208ENST00000524317 FAM43AQ8N2R8 423 aa14.58□□□□□ -0.08
SCUBE2-208ENST00000524317 F6X3S4 739 aa14.57□□□□□ -0.08
SCUBE2-208ENST00000524317 MEIS3Q99687 375 aa14.57□□□□□ -0.08
SCUBE2-208ENST00000524317 GSE1Q14687 1217 aa14.57□□□□□ -0.08
SCUBE2-208ENST00000524317 ERBB3P21860 1342 aa14.56□□□□□ -0.08
SCUBE2-208ENST00000524317 NPHP3Q7Z494 1330 aa14.56□□□□□ -0.08
SCUBE2-208ENST00000524317 ATP10DQ9P241 1426 aa14.56□□□□□ -0.08
SCUBE2-208ENST00000524317 FLIIQ13045 1269 aa14.56□□□□□ -0.08
SCUBE2-208ENST00000524317 SLC4A10Q6U841 1118 aa14.56□□□□□ -0.08
SCUBE2-208ENST00000524317 ANKRD44Q8N8A2 993 aa14.56□□□□□ -0.08
SCUBE2-208ENST00000524317 CCT4P50991 539 aaKnown RBP14.55□□□□□ -0.08
SCUBE2-208ENST00000524317 CEP85Q6P2H3 762 aa14.55□□□□□ -0.08
SCUBE2-208ENST00000524317 RPAP2Q8IXW5 612 aaPredicted RBP14.55□□□□□ -0.08
SCUBE2-208ENST00000524317 MED1Q15648 1581 aaPredicted RBP14.55□□□□□ -0.08
SCUBE2-208ENST00000524317 MPRIPQ6WCQ1 1025 aa14.55□□□□□ -0.08
SCUBE2-208ENST00000524317 DCTPP1Q9H773 170 aa14.55□□□□□ -0.08
SCUBE2-208ENST00000524317 UPF2Q9HAU5 1272 aaKnown RBP14.55□□□□□ -0.08
SCUBE2-208ENST00000524317 STRCP1A6NGW2 1772 aa14.55□□□□□ -0.08
SCUBE2-208ENST00000524317 SLC4A3P48751 1232 aa14.54□□□□□ -0.08
SCUBE2-208ENST00000524317 EIF4A1P60842 406 aaKnown RBP14.54□□□□□ -0.08
SCUBE2-208ENST00000524317 PXDNQ92626 1479 aa14.54□□□□□ -0.08
SCUBE2-208ENST00000524317 FKBP5Q13451 457 aaPredicted RBP14.54□□□□□ -0.08
SCUBE2-208ENST00000524317 C1orf141Q5JVX7 400 aa14.54□□□□□ -0.08
SCUBE2-208ENST00000524317 HDGFL1Q5TGJ6 251 aa14.54□□□□□ -0.08
SCUBE2-208ENST00000524317 TBC1D32Q96NH3 1257 aa14.54□□□□□ -0.08
SCUBE2-208ENST00000524317 KDM4FA0A1W2PPD8 638 aa14.53□□□□□ -0.08
SCUBE2-208ENST00000524317 TEFQ10587 303 aa14.53□□□□□ -0.08
SCUBE2-208ENST00000524317 FAM177A1Q8N128 213 aaPredicted RBP14.53□□□□□ -0.08
SCUBE2-208ENST00000524317 BTBD11A6QL63 1104 aa14.53□□□□□ -0.08
SCUBE2-208ENST00000524317 RNMTO43148 476 aaKnown RBP14.53□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms