RNA–Protein interactions for RNA: ENST00000524039.5

GSDMB-215, Transcript of gasdermin B, humanhuman

TSL 2

Gene GSDMB, Length 1,100 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GSDMB-215ENST00000524039 PCDH11XQ9BZA7 1347 aa11.02□□□□□ -0.65
GSDMB-215ENST00000524039 PCDH11YQ9BZA8 1340 aa11.02□□□□□ -0.65
GSDMB-215ENST00000524039 EDC4Q6P2E9 1401 aaKnown RBP11.01□□□□□ -0.65
GSDMB-215ENST00000524039 LOC102724428A0A0B4J2F2 783 aa11.01□□□□□ -0.65
GSDMB-215ENST00000524039 VEGFAP15692 232 aaPredicted RBP11.01□□□□□ -0.65
GSDMB-215ENST00000524039 KCNA3P22001 575 aa11.01□□□□□ -0.65
GSDMB-215ENST00000524039 FBLN1P23142 703 aa11.01□□□□□ -0.65
GSDMB-215ENST00000524039 SIK1P57059 783 aa11.01□□□□□ -0.65
GSDMB-215ENST00000524039 DALRD3Q5D0E6 543 aaKnown RBP11.01□□□□□ -0.65
GSDMB-215ENST00000524039 NLGN1Q8N2Q7 840 aa11.01□□□□□ -0.65
GSDMB-215ENST00000524039 PIGBQ92521 554 aa11.01□□□□□ -0.65
GSDMB-215ENST00000524039 PRDM10Q9NQV6 1147 aa11.01□□□□□ -0.65
GSDMB-215ENST00000524039 PARP3Q9Y6F1 533 aa11.01□□□□□ -0.65
GSDMB-215ENST00000524039 MAP3K19Q56UN5 1328 aa11.01□□□□□ -0.65
GSDMB-215ENST00000524039 TIAM2Q8IVF5 1701 aa11.01□□□□□ -0.65
GSDMB-215ENST00000524039 DCAF5Q96JK2 942 aa11□□□□□ -0.65
GSDMB-215ENST00000524039 ATP6V1AP38606 617 aa10.99□□□□□ -0.65
GSDMB-215ENST00000524039 ITPK1Q13572 414 aa10.99□□□□□ -0.65
GSDMB-215ENST00000524039 TRAPPC3LQ5T215 181 aa10.99□□□□□ -0.65
GSDMB-215ENST00000524039 AIDAQ96BJ3 306 aa10.99□□□□□ -0.65
GSDMB-215ENST00000524039 CYP27B1O15528 508 aa10.98□□□□□ -0.65
GSDMB-215ENST00000524039 CTCFP49711 727 aaPredicted RBP10.98□□□□□ -0.65
GSDMB-215ENST00000524039 RASSF7Q02833 373 aa10.98□□□□□ -0.65
GSDMB-215ENST00000524039 SLC12A5Q9H2X9 1139 aa10.98□□□□□ -0.65
GSDMB-215ENST00000524039 RTCBQ9Y3I0 505 aaKnown RBP10.98□□□□□ -0.65
GSDMB-215ENST00000524039 GLTPD2A6NH11 291 aa10.97□□□□□ -0.65
GSDMB-215ENST00000524039 MLLT1Q03111 559 aaPredicted RBP10.97□□□□□ -0.65
GSDMB-215ENST00000524039 ABHD8Q96I13 439 aa10.97□□□□□ -0.65
GSDMB-215ENST00000524039 COG3Q96JB2 828 aa10.97□□□□□ -0.65
GSDMB-215ENST00000524039 CREBZFQ9NS37 354 aa10.97□□□□□ -0.65
GSDMB-215ENST00000524039 TERF2IPQ9NYB0 399 aa10.97□□□□□ -0.65
GSDMB-215ENST00000524039 SMG6Q86US8 1419 aaKnown RBP10.97□□□□□ -0.65
GSDMB-215ENST00000524039 VIRMAQ69YN4 1812 aaKnown RBP10.96□□□□□ -0.65
GSDMB-215ENST00000524039 A0A1W2PP64 1363 aa10.96□□□□□ -0.65
GSDMB-215ENST00000524039 GYS1P13807 737 aa10.96□□□□□ -0.65
GSDMB-215ENST00000524039 CHRNA5P30532 468 aa10.96□□□□□ -0.65
GSDMB-215ENST00000524039 RFC4P35249 363 aa10.96□□□□□ -0.65
GSDMB-215ENST00000524039 LBX1P52954 281 aa10.96□□□□□ -0.65
GSDMB-215ENST00000524039 ARHGEF1Q92888 912 aaKnown RBP10.96□□□□□ -0.65
GSDMB-215ENST00000524039 ASAP1Q9ULH1 1129 aa10.96□□□□□ -0.65
GSDMB-215ENST00000524039 ROCK2O75116 1388 aaKnown RBP10.95□□□□□ -0.66
GSDMB-215ENST00000524039 ZC3H4Q9UPT8 1303 aaKnown RBP10.95□□□□□ -0.66
GSDMB-215ENST00000524039 RRS1Q15050 365 aaKnown RBP10.95□□□□□ -0.66
GSDMB-215ENST00000524039 TMOD3Q9NYL9 352 aa10.95□□□□□ -0.66
GSDMB-215ENST00000524039 COL5A3P25940 1745 aaPredicted RBP10.95□□□□□ -0.66
GSDMB-215ENST00000524039 CCDC85CA6NKD9 419 aa10.94□□□□□ -0.66
GSDMB-215ENST00000524039 LMNB1P20700 586 aa10.94□□□□□ -0.66
GSDMB-215ENST00000524039 MYH14Q7Z406 1995 aaKnown RBP10.94□□□□□ -0.66
GSDMB-215ENST00000524039 RTL1A6NKG5 1358 aa10.93□□□□□ -0.66
GSDMB-215ENST00000524039 CNTNAP1P78357 1384 aa10.93□□□□□ -0.66
GSDMB-215ENST00000524039 POTECB2RU33 542 aa10.93□□□□□ -0.66
GSDMB-215ENST00000524039 DICER1Q9UPY3 1922 aaKnown RBP10.93□□□□□ -0.66
GSDMB-215ENST00000524039 KDM6AO15550 1401 aaPredicted RBP10.92□□□□□ -0.66
GSDMB-215ENST00000524039 ADRA2BP18089 450 aa10.92□□□□□ -0.66
GSDMB-215ENST00000524039 CHADLQ6NUI6 762 aa10.92□□□□□ -0.66
GSDMB-215ENST00000524039 RBM42Q9BTD8 480 aaKnown RBP10.92□□□□□ -0.66
GSDMB-215ENST00000524039 AFDNP55196 1824 aaKnown RBP10.91□□□□□ -0.66
GSDMB-215ENST00000524039 DLEC1Q9Y238 1755 aa10.91□□□□□ -0.66
GSDMB-215ENST00000524039 RPS6KA4O75676 772 aa10.91□□□□□ -0.66
GSDMB-215ENST00000524039 VEGFBP49765 207 aa10.91□□□□□ -0.66
GSDMB-215ENST00000524039 NKX1-1Q15270 411 aaPredicted RBP10.91□□□□□ -0.66
GSDMB-215ENST00000524039 DPY19L2Q6NUT2 758 aa10.91□□□□□ -0.66
GSDMB-215ENST00000524039 L3MBTL2Q969R5 705 aa10.91□□□□□ -0.66
GSDMB-215ENST00000524039 ATG3Q9NT62 314 aa10.91□□□□□ -0.66
GSDMB-215ENST00000524039 ZNF831Q5JPB2 1677 aa10.91□□□□□ -0.66
GSDMB-215ENST00000524039 RGS19P49795 217 aa10.9□□□□□ -0.66
GSDMB-215ENST00000524039 DDR1Q08345 913 aa10.9□□□□□ -0.66
GSDMB-215ENST00000524039 HSP90AB2PQ58FF8 381 aa10.9□□□□□ -0.66
GSDMB-215ENST00000524039 WBP1LQ9NX94 342 aa10.9□□□□□ -0.66
GSDMB-215ENST00000524039 SRP68Q9UHB9 627 aaKnown RBP10.9□□□□□ -0.66
GSDMB-215ENST00000524039 SPG7Q9UQ90 795 aa10.9□□□□□ -0.66
GSDMB-215ENST00000524039 TNRC18O15417 2968 aaPredicted RBP10.9□□□□□ -0.66
GSDMB-215ENST00000524039 POTEIP0CG38 1075 aa10.89□□□□□ -0.67
GSDMB-215ENST00000524039 POTEJP0CG39 1038 aa10.89□□□□□ -0.67
GSDMB-215ENST00000524039 HSPA8P11142 646 aaKnown RBP10.89□□□□□ -0.67
GSDMB-215ENST00000524039 FKBP8Q14318 412 aa10.89□□□□□ -0.67
GSDMB-215ENST00000524039 RC3H1Q5TC82 1133 aaKnown RBP10.89□□□□□ -0.67
GSDMB-215ENST00000524039 CFAP44Q96MT7 982 aa10.89□□□□□ -0.67
GSDMB-215ENST00000524039 SLC4A9Q96Q91 983 aa10.89□□□□□ -0.67
GSDMB-215ENST00000524039 INSRP06213 1382 aa10.89□□□□□ -0.67
GSDMB-215ENST00000524039 CNTNAP4Q9C0A0 1308 aa10.88□□□□□ -0.67
GSDMB-215ENST00000524039 KDRP35968 1356 aa10.88□□□□□ -0.67
GSDMB-215ENST00000524039 PDE4DIPQ5VU43 2346 aa10.87□□□□□ -0.67
GSDMB-215ENST00000524039 GGNBP2Q9H3C7 697 aa10.87□□□□□ -0.67
GSDMB-215ENST00000524039 KIF20BQ96Q89 1820 aa10.86□□□□□ -0.67
GSDMB-215ENST00000524039 TMEM88BA6NKF7 163 aa10.86□□□□□ -0.67
GSDMB-215ENST00000524039 NFKBIEO00221 500 aa10.86□□□□□ -0.67
GSDMB-215ENST00000524039 POLRMTO00411 1230 aaKnown RBP10.86□□□□□ -0.67
GSDMB-215ENST00000524039 IFNL2Q8IZJ0 200 aa10.86□□□□□ -0.67
GSDMB-215ENST00000524039 TTLL6Q8N841 843 aa10.86□□□□□ -0.67
GSDMB-215ENST00000524039 CACNA1SQ13698 1873 aa10.86□□□□□ -0.67
GSDMB-215ENST00000524039 FER1L6Q2WGJ9 1857 aa10.86□□□□□ -0.67
GSDMB-215ENST00000524039 PASKQ96RG2 1323 aa10.85□□□□□ -0.67
GSDMB-215ENST00000524039 USP42Q9H9J4 1324 aaKnown RBP10.85□□□□□ -0.67
GSDMB-215ENST00000524039 PHKG2P15735 406 aa10.85□□□□□ -0.67
GSDMB-215ENST00000524039 ERFEQ4G0M1 354 aa10.85□□□□□ -0.67
GSDMB-215ENST00000524039 FLT4P35916 1363 aa10.85□□□□□ -0.67
GSDMB-215ENST00000524039 SCN4AP35499 1836 aa10.84□□□□□ -0.67
GSDMB-215ENST00000524039 DDNO94850 711 aaPredicted RBP10.84□□□□□ -0.67
GSDMB-215ENST00000524039 TM4SF1P30408 202 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms