RNA–Protein interactions for RNA: ENST00000523514.1

FAM49B-227, Transcript of family with sequence similarity 49 member B, humanhuman

TSL 4

Gene FAM49B, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM49B-227ENST00000523514 GALR2O43603 387 aaPredicted RBP10.47□□□□□ -0.73
FAM49B-227ENST00000523514 PKD1L3Q7Z443 1732 aa10.47□□□□□ -0.73
FAM49B-227ENST00000523514 SHANK3Q9BYB0 1731 aa10.47□□□□□ -0.73
FAM49B-227ENST00000523514 TATP17735 454 aaPredicted RBP10.46□□□□□ -0.73
FAM49B-227ENST00000523514 BAG6P46379 1132 aa10.46□□□□□ -0.73
FAM49B-227ENST00000523514 EIF4A2Q14240 407 aaKnown RBP10.46□□□□□ -0.73
FAM49B-227ENST00000523514 FAM182BQ5T319 152 aa10.46□□□□□ -0.73
FAM49B-227ENST00000523514 MARCH10Q8NA82 808 aaPredicted RBP10.46□□□□□ -0.73
FAM49B-227ENST00000523514 RGPD3A6NKT7 1758 aaPredicted RBP10.46□□□□□ -0.74
FAM49B-227ENST00000523514 RGPD4Q7Z3J3 1758 aa10.46□□□□□ -0.74
FAM49B-227ENST00000523514 NHSQ6T4R5 1651 aa10.45□□□□□ -0.74
FAM49B-227ENST00000523514 PARD3Q8TEW0 1356 aa10.45□□□□□ -0.74
FAM49B-227ENST00000523514 IGSF1Q8N6C5 1336 aa10.45□□□□□ -0.74
FAM49B-227ENST00000523514 POTEIP0CG38 1075 aa10.45□□□□□ -0.74
FAM49B-227ENST00000523514 USHBP1Q8N6Y0 703 aa10.45□□□□□ -0.74
FAM49B-227ENST00000523514 EYA1Q99502 592 aa10.45□□□□□ -0.74
FAM49B-227ENST00000523514 PCDH11XQ9BZA7 1347 aa10.44□□□□□ -0.74
FAM49B-227ENST00000523514 PCDH11YQ9BZA8 1340 aa10.44□□□□□ -0.74
FAM49B-227ENST00000523514 TRIM37O94972 964 aa10.44□□□□□ -0.74
FAM49B-227ENST00000523514 MTHFSP49914 203 aa10.44□□□□□ -0.74
FAM49B-227ENST00000523514 ZCRB1Q8TBF4 217 aaKnown RBP10.44□□□□□ -0.74
FAM49B-227ENST00000523514 CFAP53Q96M91 514 aa10.43□□□□□ -0.74
FAM49B-227ENST00000523514 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.43□□□□□ -0.74
FAM49B-227ENST00000523514 KDRP35968 1356 aa10.42□□□□□ -0.74
FAM49B-227ENST00000523514 DOT1LQ8TEK3 1739 aa10.42□□□□□ -0.74
FAM49B-227ENST00000523514 DIAPH1O60610 1272 aaKnown RBP10.42□□□□□ -0.74
FAM49B-227ENST00000523514 CNGB1Q14028 1251 aaPredicted RBP10.42□□□□□ -0.74
FAM49B-227ENST00000523514 SPG7Q9UQ90 795 aa10.42□□□□□ -0.74
FAM49B-227ENST00000523514 COL3A1P02461 1466 aaPredicted RBP10.42□□□□□ -0.74
FAM49B-227ENST00000523514 RREB1Q92766 1687 aa10.41□□□□□ -0.74
FAM49B-227ENST00000523514 APBA3O96018 575 aa10.41□□□□□ -0.74
FAM49B-227ENST00000523514 IL13P35225 146 aa10.41□□□□□ -0.74
FAM49B-227ENST00000523514 DDX10Q13206 875 aaKnown RBP10.41□□□□□ -0.74
FAM49B-227ENST00000523514 DDX54Q8TDD1 881 aaKnown RBP10.41□□□□□ -0.74
FAM49B-227ENST00000523514 MS4A3Q96HJ5 214 aa10.41□□□□□ -0.74
FAM49B-227ENST00000523514 KAT6BQ8WYB5 2073 aa10.41□□□□□ -0.74
FAM49B-227ENST00000523514 PPP2R1AP30153 589 aa10.4□□□□□ -0.74
FAM49B-227ENST00000523514 DEFB132Q7Z7B7 95 aa10.4□□□□□ -0.74
FAM49B-227ENST00000523514 BTAF1O14981 1849 aa10.4□□□□□ -0.75
FAM49B-227ENST00000523514 PLSCR1O15162 318 aa10.39□□□□□ -0.75
FAM49B-227ENST00000523514 RALBP1Q15311 655 aa10.39□□□□□ -0.75
FAM49B-227ENST00000523514 AMOTQ4VCS5 1084 aa10.39□□□□□ -0.75
FAM49B-227ENST00000523514 SULT6B1Q6IMI4 303 aa10.39□□□□□ -0.75
FAM49B-227ENST00000523514 ZNF316A6NFI3 1004 aaPredicted RBP10.38□□□□□ -0.75
FAM49B-227ENST00000523514 EN1Q05925 392 aaPredicted RBP10.38□□□□□ -0.75
FAM49B-227ENST00000523514 PLEKHO1Q53GL0 409 aaPredicted RBP10.38□□□□□ -0.75
FAM49B-227ENST00000523514 IFNL2Q8IZJ0 200 aa10.38□□□□□ -0.75
FAM49B-227ENST00000523514 CAMKK2Q96RR4 588 aa10.38□□□□□ -0.75
FAM49B-227ENST00000523514 NUDCQ9Y266 331 aa10.38□□□□□ -0.75
FAM49B-227ENST00000523514 NUP188Q5SRE5 1749 aa10.38□□□□□ -0.75
FAM49B-227ENST00000523514 CYP27B1O15528 508 aa10.37□□□□□ -0.75
FAM49B-227ENST00000523514 HSP90AB1P08238 724 aaKnown RBP10.37□□□□□ -0.75
FAM49B-227ENST00000523514 AEBP1Q8IUX7 1158 aa10.37□□□□□ -0.75
FAM49B-227ENST00000523514 ACSBG1Q96GR2 724 aa10.37□□□□□ -0.75
FAM49B-227ENST00000523514 MFRPQ9BY79 579 aa10.37□□□□□ -0.75
FAM49B-227ENST00000523514 RYDENQ9NUL5 291 aaKnown RBP10.37□□□□□ -0.75
FAM49B-227ENST00000523514 TRPC6Q9Y210 931 aa10.37□□□□□ -0.75
FAM49B-227ENST00000523514 TOGARAM1Q9Y4F4 1720 aa10.36□□□□□ -0.75
FAM49B-227ENST00000523514 ITGB4P16144 1822 aa10.36□□□□□ -0.75
FAM49B-227ENST00000523514 U2SURPO15042 1029 aaKnown RBP10.36□□□□□ -0.75
FAM49B-227ENST00000523514 PHKG2P15735 406 aa10.36□□□□□ -0.75
FAM49B-227ENST00000523514 EZH2Q15910 746 aaKnown RBP10.36□□□□□ -0.75
FAM49B-227ENST00000523514 MYBBP1AQ9BQG0 1328 aaKnown RBP10.35□□□□□ -0.75
FAM49B-227ENST00000523514 KCNQ2O43526 872 aa10.35□□□□□ -0.75
FAM49B-227ENST00000523514 NBR1Q14596 966 aa10.35□□□□□ -0.75
FAM49B-227ENST00000523514 C1orf141Q5JVX7 400 aa10.35□□□□□ -0.75
FAM49B-227ENST00000523514 ZNF530Q6P9A1 599 aaPredicted RBP10.35□□□□□ -0.75
FAM49B-227ENST00000523514 SYTL4Q96C24 671 aaPredicted RBP10.35□□□□□ -0.75
FAM49B-227ENST00000523514 LY75O60449 1722 aa10.35□□□□□ -0.75
FAM49B-227ENST00000523514 HMOX1P09601 288 aa10.34□□□□□ -0.75
FAM49B-227ENST00000523514 HMGB2P26583 209 aaKnown RBP10.34□□□□□ -0.75
FAM49B-227ENST00000523514 PRIM1P49642 420 aaKnown RBP10.34□□□□□ -0.75
FAM49B-227ENST00000523514 NBPF14Q5TI25 921 aa10.34□□□□□ -0.75
FAM49B-227ENST00000523514 PTF1AQ7RTS3 328 aa10.34□□□□□ -0.75
FAM49B-227ENST00000523514 EFCAB3Q8N7B9 438 aa10.34□□□□□ -0.75
FAM49B-227ENST00000523514 DCBLD2Q96PD2 775 aa10.34□□□□□ -0.75
FAM49B-227ENST00000523514 DCAF5Q96JK2 942 aa10.33□□□□□ -0.76
FAM49B-227ENST00000523514 SCN11AQ9UI33 1791 aa10.33□□□□□ -0.76
FAM49B-227ENST00000523514 ERVV-2B6SEH9 535 aa10.32□□□□□ -0.76
FAM49B-227ENST00000523514 U2AF1L5P0DN76 240 aaPredicted RBP10.32□□□□□ -0.76
FAM49B-227ENST00000523514 U2AF1Q01081 240 aaKnown RBP eCLIP10.32□□□□□ -0.76
FAM49B-227ENST00000523514 TXNRD1Q16881 649 aa10.32□□□□□ -0.76
FAM49B-227ENST00000523514 AKAP4Q5JQC9 854 aa10.32□□□□□ -0.76
FAM49B-227ENST00000523514 SLC27A3Q5K4L6 730 aa10.32□□□□□ -0.76
FAM49B-227ENST00000523514 FBXO22Q8NEZ5 403 aa10.32□□□□□ -0.76
FAM49B-227ENST00000523514 GAS2L2Q8NHY3 880 aa10.32□□□□□ -0.76
FAM49B-227ENST00000523514 SMARCC1Q92922 1105 aaPredicted RBP10.32□□□□□ -0.76
FAM49B-227ENST00000523514 PRKRIP1Q9H875 184 aaPredicted RBP10.32□□□□□ -0.76
FAM49B-227ENST00000523514 VIRMAQ69YN4 1812 aaKnown RBP10.32□□□□□ -0.76
FAM49B-227ENST00000523514 FCHSD2O94868 740 aa10.31□□□□□ -0.76
FAM49B-227ENST00000523514 MPRIPQ6WCQ1 1025 aa10.31□□□□□ -0.76
FAM49B-227ENST00000523514 RSPH6AQ9H0K4 717 aa10.31□□□□□ -0.76
FAM49B-227ENST00000523514 TMOD3Q9NYL9 352 aa10.31□□□□□ -0.76
FAM49B-227ENST00000523514 PAPPAQ13219 1627 aa10.31□□□□□ -0.76
FAM49B-227ENST00000523514 KDM6AO15550 1401 aaPredicted RBP10.31□□□□□ -0.76
FAM49B-227ENST00000523514 ADAMTS7Q9UKP4 1686 aa10.31□□□□□ -0.76
FAM49B-227ENST00000523514 NEFMP07197 916 aa10.3□□□□□ -0.76
FAM49B-227ENST00000523514 PRKAR2BP31323 418 aa10.3□□□□□ -0.76
FAM49B-227ENST00000523514 PNNQ9H307 717 aaKnown RBP10.3□□□□□ -0.76
FAM49B-227ENST00000523514 MRC1P22897 1456 aa10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms