RNA–Protein interactions for RNA: ENST00000523091.5

CHMP7-210, Transcript of charged multivesicular body protein 7, humanhuman

TSL 1 (best)

Gene CHMP7, Length 2,672 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP7-210ENST00000523091 KCNQ3O43525 872 aa18.33■□□□□ 0.53
CHMP7-210ENST00000523091 GNAI2P04899 355 aa18.33■□□□□ 0.53
CHMP7-210ENST00000523091 EIF2S2P20042 333 aaKnown RBP18.33■□□□□ 0.53
CHMP7-210ENST00000523091 GCP02774 474 aa18.33■□□□□ 0.52
CHMP7-210ENST00000523091 HDGFL1Q5TGJ6 251 aa18.33■□□□□ 0.52
CHMP7-210ENST00000523091 RGPD2P0DJD1 1756 aa18.32■□□□□ 0.52
CHMP7-210ENST00000523091 SDSP20132 328 aa18.32■□□□□ 0.52
CHMP7-210ENST00000523091 KCNH5Q8NCM2 988 aa18.32■□□□□ 0.52
CHMP7-210ENST00000523091 PNMA6EA0A0J9YXQ4 647 aa18.32■□□□□ 0.52
CHMP7-210ENST00000523091 HMMRO75330 724 aa18.32■□□□□ 0.52
CHMP7-210ENST00000523091 FAM208AQ9UK61 1670 aaKnown RBP18.31■□□□□ 0.52
CHMP7-210ENST00000523091 SNX21Q969T3 373 aa18.31■□□□□ 0.52
CHMP7-210ENST00000523091 ADAMTSL3P82987 1691 aa18.31■□□□□ 0.52
CHMP7-210ENST00000523091 TSHZ3Q63HK5 1081 aa18.31■□□□□ 0.52
CHMP7-210ENST00000523091 MPRIPQ6WCQ1 1025 aa18.31■□□□□ 0.52
CHMP7-210ENST00000523091 FOXD4L1Q9NU39 408 aa18.3■□□□□ 0.52
CHMP7-210ENST00000523091 CHMP5Q9NZZ3 219 aa18.3■□□□□ 0.52
CHMP7-210ENST00000523091 CEMIPQ8WUJ3 1361 aa18.3■□□□□ 0.52
CHMP7-210ENST00000523091 ZNF530Q6P9A1 599 aaPredicted RBP18.29■□□□□ 0.52
CHMP7-210ENST00000523091 LRRFIP2Q9Y608 721 aaKnown RBP18.29■□□□□ 0.52
CHMP7-210ENST00000523091 ARHGEF25Q86VW2 580 aa18.29■□□□□ 0.52
CHMP7-210ENST00000523091 BABAM1Q9NWV8 329 aa18.29■□□□□ 0.52
CHMP7-210ENST00000523091 AXIN2Q9Y2T1 843 aa18.29■□□□□ 0.52
CHMP7-210ENST00000523091 ANXA1P04083 346 aa18.28■□□□□ 0.52
CHMP7-210ENST00000523091 HSP90AB1P08238 724 aaKnown RBP18.28■□□□□ 0.52
CHMP7-210ENST00000523091 EIF4A1P60842 406 aaKnown RBP18.28■□□□□ 0.52
CHMP7-210ENST00000523091 PROSER2Q86WR7 435 aaPredicted RBP18.28■□□□□ 0.52
CHMP7-210ENST00000523091 GNAI3P08754 354 aa18.28■□□□□ 0.52
CHMP7-210ENST00000523091 USP44Q9H0E7 712 aa18.28■□□□□ 0.52
CHMP7-210ENST00000523091 PDE1AP54750 535 aa18.26■□□□□ 0.51
CHMP7-210ENST00000523091 ANKRD24Q8TF21 1146 aa18.26■□□□□ 0.51
CHMP7-210ENST00000523091 CHPF2Q9P2E5 772 aa18.26■□□□□ 0.51
CHMP7-210ENST00000523091 MCM4P33991 863 aa18.26■□□□□ 0.51
CHMP7-210ENST00000523091 ATP8B2P98198 1209 aa18.26■□□□□ 0.51
CHMP7-210ENST00000523091 TEFQ10587 303 aa18.26■□□□□ 0.51
CHMP7-210ENST00000523091 KRT28Q7Z3Y7 464 aa18.26■□□□□ 0.51
CHMP7-210ENST00000523091 NCOA3Q9Y6Q9 1424 aa18.26■□□□□ 0.51
CHMP7-210ENST00000523091 BTBD11A6QL63 1104 aa18.26■□□□□ 0.51
CHMP7-210ENST00000523091 DDIT3P35638 169 aa18.26■□□□□ 0.51
CHMP7-210ENST00000523091 GLIPR1L2Q4G1C9 344 aa18.26■□□□□ 0.51
CHMP7-210ENST00000523091 USP26Q9BXU7 913 aa18.26■□□□□ 0.51
CHMP7-210ENST00000523091 PLEKHO1Q53GL0 409 aaPredicted RBP18.25■□□□□ 0.51
CHMP7-210ENST00000523091 AKAP4Q5JQC9 854 aa18.25■□□□□ 0.51
CHMP7-210ENST00000523091 DDX17Q92841 729 aaKnown RBP18.25■□□□□ 0.51
CHMP7-210ENST00000523091 PXDNQ92626 1479 aa18.24■□□□□ 0.51
CHMP7-210ENST00000523091 SOS1Q07889 1333 aaPredicted RBP18.24■□□□□ 0.51
CHMP7-210ENST00000523091 ZC3H6P61129 1189 aaKnown RBP18.24■□□□□ 0.51
CHMP7-210ENST00000523091 LRRCC1Q9C099 1032 aa18.24■□□□□ 0.51
CHMP7-210ENST00000523091 UBTFL1P0CB47 393 aaPredicted RBP18.23■□□□□ 0.51
CHMP7-210ENST00000523091 K7ELQ4 463 aaPredicted RBP18.23■□□□□ 0.51
CHMP7-210ENST00000523091 HSP90AA1P07900 732 aaKnown RBP18.23■□□□□ 0.51
CHMP7-210ENST00000523091 AEBP2Q6ZN18 517 aaPredicted RBP18.23■□□□□ 0.51
CHMP7-210ENST00000523091 CACNA1FO60840 1977 aa18.22■□□□□ 0.51
CHMP7-210ENST00000523091 RNMTO43148 476 aaKnown RBP18.22■□□□□ 0.51
CHMP7-210ENST00000523091 PRAMEF22A3QJZ6 481 aa18.22■□□□□ 0.51
CHMP7-210ENST00000523091 PI4KAP2A4QPH2 592 aa18.22■□□□□ 0.51
CHMP7-210ENST00000523091 PI4KAP1Q8N8J0 262 aa18.22■□□□□ 0.51
CHMP7-210ENST00000523091 OSBPL3Q9H4L5 887 aa18.22■□□□□ 0.51
CHMP7-210ENST00000523091 MED1Q15648 1581 aaPredicted RBP18.22■□□□□ 0.51
CHMP7-210ENST00000523091 NBPF7P0C2Y1 421 aaPredicted RBP18.21■□□□□ 0.51
CHMP7-210ENST00000523091 C1orf141Q5JVX7 400 aa18.21■□□□□ 0.51
CHMP7-210ENST00000523091 SALL3Q9BXA9 1300 aa18.21■□□□□ 0.51
CHMP7-210ENST00000523091 SRCIN1Q9C0H9 1055 aa18.21■□□□□ 0.51
CHMP7-210ENST00000523091 IL1RAPL2Q9NP60 686 aa18.21■□□□□ 0.51
CHMP7-210ENST00000523091 IBTKQ9P2D0 1353 aaPredicted RBP18.2■□□□□ 0.5
CHMP7-210ENST00000523091 AMOTQ4VCS5 1084 aa18.2■□□□□ 0.5
CHMP7-210ENST00000523091 CASC1Q6TDU7 716 aa18.2■□□□□ 0.5
CHMP7-210ENST00000523091 GZF1Q9H116 711 aaPredicted RBP18.2■□□□□ 0.5
CHMP7-210ENST00000523091 SLIT3O75094 1523 aa18.2■□□□□ 0.5
CHMP7-210ENST00000523091 C1orf167Q5SNV9 1468 aa18.19■□□□□ 0.5
CHMP7-210ENST00000523091 PPP1R42Q7Z4L9 355 aa18.19■□□□□ 0.5
CHMP7-210ENST00000523091 TNPO1Q92973 898 aaKnown RBP18.19■□□□□ 0.5
CHMP7-210ENST00000523091 PHRF1Q9P1Y6 1649 aaKnown RBP18.19■□□□□ 0.5
CHMP7-210ENST00000523091 MX1P20591 662 aa18.19■□□□□ 0.5
CHMP7-210ENST00000523091 C19orf44Q9H6X5 657 aa18.19■□□□□ 0.5
CHMP7-210ENST00000523091 RRAGDQ9NQL2 400 aaPredicted RBP18.19■□□□□ 0.5
CHMP7-210ENST00000523091 PROSER3Q2NL68 480 aa18.18■□□□□ 0.5
CHMP7-210ENST00000523091 KDM3BQ7LBC6 1761 aa18.18■□□□□ 0.5
CHMP7-210ENST00000523091 BEND3Q5T5X7 828 aa18.18■□□□□ 0.5
CHMP7-210ENST00000523091 DNAAF4Q8WXU2 420 aa18.18■□□□□ 0.5
CHMP7-210ENST00000523091 PXDNLA1KZ92 1463 aa18.18■□□□□ 0.5
CHMP7-210ENST00000523091 LMO7Q8WWI1 1683 aa18.18■□□□□ 0.5
CHMP7-210ENST00000523091 RABEP1Q15276 862 aa18.17■□□□□ 0.5
CHMP7-210ENST00000523091 RILPL2Q969X0 211 aa18.17■□□□□ 0.5
CHMP7-210ENST00000523091 ERC2O15083 957 aa18.17■□□□□ 0.5
CHMP7-210ENST00000523091 SSH3Q8TE77 659 aa18.17■□□□□ 0.5
CHMP7-210ENST00000523091 ARXQ96QS3 562 aa18.17■□□□□ 0.5
CHMP7-210ENST00000523091 TRIM6-TRIM34B2RNG4 842 aa18.16■□□□□ 0.5
CHMP7-210ENST00000523091 HOXB7P09629 217 aa18.16■□□□□ 0.5
CHMP7-210ENST00000523091 NUTM1Q86Y26 1132 aa18.16■□□□□ 0.5
CHMP7-210ENST00000523091 UNC5CLQ8IV45 518 aa18.16■□□□□ 0.5
CHMP7-210ENST00000523091 TRPM3Q9HCF6 1732 aaPredicted RBP18.16■□□□□ 0.5
CHMP7-210ENST00000523091 ADCY9O60503 1353 aa18.16■□□□□ 0.5
CHMP7-210ENST00000523091 TRAK2O60296 914 aa18.16■□□□□ 0.5
CHMP7-210ENST00000523091 SURF6O75683 361 aaKnown RBP18.16■□□□□ 0.5
CHMP7-210ENST00000523091 RGPD5Q99666 1765 aa18.16■□□□□ 0.5
CHMP7-210ENST00000523091 SRGAP3O43295 1099 aa18.16■□□□□ 0.5
CHMP7-210ENST00000523091 GIGYF1O75420 1035 aaPredicted RBP18.16■□□□□ 0.5
CHMP7-210ENST00000523091 CABLES1Q8TDN4 633 aa18.16■□□□□ 0.5
CHMP7-210ENST00000523091 REC8O95072 547 aa18.15■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms