RNA–Protein interactions for RNA: ENST00000522796.1

HMGB4-204, Transcript of high mobility group box 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HMGB4, Length 2,505 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB4-204ENST00000522796 CCDC26Q8TAB7 109 aa9.8□□□□□ -0.84
HMGB4-204ENST00000522796 FMNL2Q96PY5 1086 aa9.8□□□□□ -0.84
HMGB4-204ENST00000522796 IFT88Q13099 833 aa9.79□□□□□ -0.84
HMGB4-204ENST00000522796 CLEC4GQ6UXB4 293 aa9.79□□□□□ -0.84
HMGB4-204ENST00000522796 SLX1AQ9BQ83 275 aa9.79□□□□□ -0.84
HMGB4-204ENST00000522796 RBM47A0AV96 593 aaKnown RBP9.79□□□□□ -0.84
HMGB4-204ENST00000522796 CCDC15Q0P6D6 951 aa9.79□□□□□ -0.84
HMGB4-204ENST00000522796 C17orf53Q8N3J3 647 aaPredicted RBP9.79□□□□□ -0.84
HMGB4-204ENST00000522796 CPSF2Q9P2I0 782 aaKnown RBP9.79□□□□□ -0.84
HMGB4-204ENST00000522796 PTPRCP08575 1304 aa9.78□□□□□ -0.84
HMGB4-204ENST00000522796 SGSM2O43147 1006 aa9.78□□□□□ -0.84
HMGB4-204ENST00000522796 NEBLO76041 1014 aa9.78□□□□□ -0.84
HMGB4-204ENST00000522796 BAG4O95429 457 aaKnown RBP9.78□□□□□ -0.84
HMGB4-204ENST00000522796 IVLP07476 585 aa9.78□□□□□ -0.84
HMGB4-204ENST00000522796 C16orf87Q6PH81 154 aa9.78□□□□□ -0.84
HMGB4-204ENST00000522796 PDCD2Q16342 344 aaPredicted RBP9.78□□□□□ -0.84
HMGB4-204ENST00000522796 CCDC186Q7Z3E2 898 aa9.78□□□□□ -0.84
HMGB4-204ENST00000522796 PHC3Q8NDX5 983 aa9.78□□□□□ -0.84
HMGB4-204ENST00000522796 MICAL1Q8TDZ2 1067 aa9.78□□□□□ -0.84
HMGB4-204ENST00000522796 SPATA32Q96LK8 384 aa9.78□□□□□ -0.84
HMGB4-204ENST00000522796 KIF2CQ99661 725 aa9.78□□□□□ -0.84
HMGB4-204ENST00000522796 UBA5Q9GZZ9 404 aa9.78□□□□□ -0.84
HMGB4-204ENST00000522796 ABCF2Q9UG63 623 aa9.78□□□□□ -0.84
HMGB4-204ENST00000522796 CTDP1Q9Y5B0 961 aaPredicted RBP9.78□□□□□ -0.84
HMGB4-204ENST00000522796 MTUS2Q5JR59 1369 aa9.77□□□□□ -0.85
HMGB4-204ENST00000522796 PLEKHH1Q9ULM0 1364 aa9.77□□□□□ -0.85
HMGB4-204ENST00000522796 FLT3P36888 993 aa9.77□□□□□ -0.85
HMGB4-204ENST00000522796 USP8P40818 1118 aa9.77□□□□□ -0.85
HMGB4-204ENST00000522796 ICA1Q05084 483 aa9.77□□□□□ -0.85
HMGB4-204ENST00000522796 KANK4Q5T7N3 995 aaPredicted RBP9.77□□□□□ -0.85
HMGB4-204ENST00000522796 TTC12Q9H892 705 aaPredicted RBP9.77□□□□□ -0.85
HMGB4-204ENST00000522796 PUF60Q9UHX1 559 aaKnown RBP9.77□□□□□ -0.85
HMGB4-204ENST00000522796 HTATSF1O43719 755 aaKnown RBP9.77□□□□□ -0.85
HMGB4-204ENST00000522796 TBC1D8BQ0IIM8 1120 aa9.77□□□□□ -0.85
HMGB4-204ENST00000522796 RNF20Q5VTR2 975 aa9.77□□□□□ -0.85
HMGB4-204ENST00000522796 TEX11Q8IYF3 940 aa9.77□□□□□ -0.85
HMGB4-204ENST00000522796 PSD3Q9NYI0 1048 aa9.77□□□□□ -0.85
HMGB4-204ENST00000522796 BRD4O60885 1362 aaPredicted RBP9.76□□□□□ -0.85
HMGB4-204ENST00000522796 EIF3CLB5ME19 914 aaKnown RBP9.76□□□□□ -0.85
HMGB4-204ENST00000522796 MAP4K4O95819 1239 aaPredicted RBP9.76□□□□□ -0.85
HMGB4-204ENST00000522796 MYBL2P10244 700 aa9.76□□□□□ -0.85
HMGB4-204ENST00000522796 PEX19P40855 299 aa9.76□□□□□ -0.85
HMGB4-204ENST00000522796 GRIK3Q13003 919 aa9.76□□□□□ -0.85
HMGB4-204ENST00000522796 SF3B2Q13435 895 aaKnown RBP9.76□□□□□ -0.85
HMGB4-204ENST00000522796 NLRP13Q86W25 1043 aa9.76□□□□□ -0.85
HMGB4-204ENST00000522796 GOLGA6L2Q8N9W4 650 aaPredicted RBP9.76□□□□□ -0.85
HMGB4-204ENST00000522796 GIMAP7Q8NHV1 300 aa9.76□□□□□ -0.85
HMGB4-204ENST00000522796 DNAAF4Q8WXU2 420 aa9.76□□□□□ -0.85
HMGB4-204ENST00000522796 EIF3CQ99613 913 aaKnown RBP9.76□□□□□ -0.85
HMGB4-204ENST00000522796 MMTAG2Q9BU76 263 aaKnown RBP9.76□□□□□ -0.85
HMGB4-204ENST00000522796 ZSCAN16Q9H4T2 348 aaPredicted RBP9.76□□□□□ -0.85
HMGB4-204ENST00000522796 VEZTQ9HBM0 779 aa9.76□□□□□ -0.85
HMGB4-204ENST00000522796 A1CFQ9NQ94 594 aaKnown RBP9.76□□□□□ -0.85
HMGB4-204ENST00000522796 MAGEC2Q9UBF1 373 aaPredicted RBP9.76□□□□□ -0.85
HMGB4-204ENST00000522796 TBC1D2BQ9UPU7 963 aa9.76□□□□□ -0.85
HMGB4-204ENST00000522796 SH3BP5O60239 455 aa9.76□□□□□ -0.85
HMGB4-204ENST00000522796 PSMD2Q13200 908 aa9.76□□□□□ -0.85
HMGB4-204ENST00000522796 CCDC30Q5VVM6 783 aa9.76□□□□□ -0.85
HMGB4-204ENST00000522796 FBXO38Q6PIJ6 1188 aa9.76□□□□□ -0.85
HMGB4-204ENST00000522796 PRPF38AQ8NAV1 312 aaKnown RBP9.76□□□□□ -0.85
HMGB4-204ENST00000522796 CCDC112Q8NEF3 446 aa9.76□□□□□ -0.85
HMGB4-204ENST00000522796 PLEKHH2Q8IVE3 1493 aa9.75□□□□□ -0.85
HMGB4-204ENST00000522796 STK10O94804 968 aaKnown RBP9.75□□□□□ -0.85
HMGB4-204ENST00000522796 CORO7P57737 925 aa9.75□□□□□ -0.85
HMGB4-204ENST00000522796 ZRSR1Q15695 479 aaKnown RBP9.75□□□□□ -0.85
HMGB4-204ENST00000522796 SLC5A9Q2M3M2 681 aa9.75□□□□□ -0.85
HMGB4-204ENST00000522796 HSP90B2PQ58FF3 399 aa9.75□□□□□ -0.85
HMGB4-204ENST00000522796 NUTM1Q86Y26 1132 aa9.75□□□□□ -0.85
HMGB4-204ENST00000522796 EFCAB13Q8IY85 973 aa9.75□□□□□ -0.85
HMGB4-204ENST00000522796 ZNF483Q8TF39 744 aaPredicted RBP9.75□□□□□ -0.85
HMGB4-204ENST00000522796 SMARCE1Q969G3 411 aa9.75□□□□□ -0.85
HMGB4-204ENST00000522796 THOC1Q96FV9 657 aaKnown RBP9.75□□□□□ -0.85
HMGB4-204ENST00000522796 AK7Q96M32 723 aa9.75□□□□□ -0.85
HMGB4-204ENST00000522796 CFAP53Q96M91 514 aa9.75□□□□□ -0.85
HMGB4-204ENST00000522796 AGAP3Q96P47 875 aa9.75□□□□□ -0.85
HMGB4-204ENST00000522796 LMBRD1Q9NUN5 540 aa9.75□□□□□ -0.85
HMGB4-204ENST00000522796 CGNL1Q0VF96 1302 aa9.75□□□□□ -0.85
HMGB4-204ENST00000522796 RPS6KA3P51812 740 aa9.75□□□□□ -0.85
HMGB4-204ENST00000522796 PSMC1P62191 440 aaKnown RBP9.75□□□□□ -0.85
HMGB4-204ENST00000522796 LEKR1Q6ZMV7 388 aa9.75□□□□□ -0.85
HMGB4-204ENST00000522796 SLC24A3Q9HC58 644 aa9.75□□□□□ -0.85
HMGB4-204ENST00000522796 SPATS2LQ9NUQ6 558 aaKnown RBP9.75□□□□□ -0.85
HMGB4-204ENST00000522796 GNL3LQ9NVN8 582 aaKnown RBP9.75□□□□□ -0.85
HMGB4-204ENST00000522796 BLOC1S6Q9UL45 172 aa9.75□□□□□ -0.85
HMGB4-204ENST00000522796 UTP18Q9Y5J1 556 aaKnown RBP eCLIP9.75□□□□□ -0.85
HMGB4-204ENST00000522796 RUSC2Q8N2Y8 1516 aa9.74□□□□□ -0.85
HMGB4-204ENST00000522796 ZC3H4Q9UPT8 1303 aaKnown RBP9.74□□□□□ -0.85
HMGB4-204ENST00000522796 U2AF1L5P0DN76 240 aaPredicted RBP9.74□□□□□ -0.85
HMGB4-204ENST00000522796 NAT2P11245 290 aa9.74□□□□□ -0.85
HMGB4-204ENST00000522796 MCCD1P59942 119 aaPredicted RBP9.74□□□□□ -0.85
HMGB4-204ENST00000522796 U2AF1Q01081 240 aaKnown RBP eCLIP9.74□□□□□ -0.85
HMGB4-204ENST00000522796 TBC1D25Q3MII6 688 aa9.74□□□□□ -0.85
HMGB4-204ENST00000522796 NFXL1Q6ZNB6 911 aa9.74□□□□□ -0.85
HMGB4-204ENST00000522796 DRAXINQ8NBI3 349 aaPredicted RBP9.74□□□□□ -0.85
HMGB4-204ENST00000522796 TRIM6Q9C030 488 aaPredicted RBP9.74□□□□□ -0.85
HMGB4-204ENST00000522796 INSRP06213 1382 aa9.74□□□□□ -0.85
HMGB4-204ENST00000522796 KIF7Q2M1P5 1343 aa9.74□□□□□ -0.85
HMGB4-204ENST00000522796 U2SURPO15042 1029 aaKnown RBP9.74□□□□□ -0.85
HMGB4-204ENST00000522796 IGHDP01880 384 aa9.74□□□□□ -0.85
HMGB4-204ENST00000522796 GCFC2P16383 781 aaKnown RBP9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms