RNA–Protein interactions for RNA: ENST00000522719.2

NKX2-1-204, Transcript of NK2 homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NKX2-1, Length 1,417 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1-204ENST00000522719 BABAM1Q9NWV8 329 aa33.46■■■□□ 2.95
NKX2-1-204ENST00000522719 E9PSI1 815 aa33.45■■■□□ 2.95
NKX2-1-204ENST00000522719 SBF2Q86WG5 1849 aa33.45■■■□□ 2.95
NKX2-1-204ENST00000522719 ZNF853P0CG23 659 aa33.45■■■□□ 2.94
NKX2-1-204ENST00000522719 SLFN5Q08AF3 891 aa33.44■■■□□ 2.94
NKX2-1-204ENST00000522719 NFATC2IPQ8NCF5 419 aa33.44■■■□□ 2.94
NKX2-1-204ENST00000522719 MYH16Q9H6N6 1097 aa33.43■■■□□ 2.94
NKX2-1-204ENST00000522719 CHL1O00533 1208 aa33.42■■■□□ 2.94
NKX2-1-204ENST00000522719 FAM196AQ6ZSG2 479 aa33.42■■■□□ 2.94
NKX2-1-204ENST00000522719 CDCA7LQ96GN5 454 aa33.42■■■□□ 2.94
NKX2-1-204ENST00000522719 SPINK5Q9NQ38 1064 aaPredicted RBP33.41■■■□□ 2.94
NKX2-1-204ENST00000522719 TMOD3Q9NYL9 352 aa33.41■■■□□ 2.94
NKX2-1-204ENST00000522719 LAS1LQ9Y4W2 734 aaKnown RBP33.41■■■□□ 2.94
NKX2-1-204ENST00000522719 KDM3BQ7LBC6 1761 aa33.4■■■□□ 2.94
NKX2-1-204ENST00000522719 NHSQ6T4R5 1651 aa33.39■■■□□ 2.94
NKX2-1-204ENST00000522719 TRMT2AQ8IZ69 625 aaKnown RBP33.39■■■□□ 2.94
NKX2-1-204ENST00000522719 BTBD11A6QL63 1104 aa33.38■■■□□ 2.93
NKX2-1-204ENST00000522719 PRIM1P49642 420 aaKnown RBP33.38■■■□□ 2.93
NKX2-1-204ENST00000522719 FAM182BQ5T319 152 aa33.38■■■□□ 2.93
NKX2-1-204ENST00000522719 ACSBG1Q96GR2 724 aa33.36■■■□□ 2.93
NKX2-1-204ENST00000522719 MBIPQ9NS73 344 aa33.36■■■□□ 2.93
NKX2-1-204ENST00000522719 TSPYL4Q9UJ04 414 aa33.36■■■□□ 2.93
NKX2-1-204ENST00000522719 SYTL4Q96C24 671 aaPredicted RBP33.36■■■□□ 2.93
NKX2-1-204ENST00000522719 PIGBQ92521 554 aa33.35■■■□□ 2.93
NKX2-1-204ENST00000522719 PAPPAQ13219 1627 aa33.34■■■□□ 2.93
NKX2-1-204ENST00000522719 MIS18AQ9NYP9 233 aa33.34■■■□□ 2.93
NKX2-1-204ENST00000522719 FANCIQ9NVI1 1328 aa33.34■■■□□ 2.93
NKX2-1-204ENST00000522719 DUSP27Q5VZP5 1158 aa33.33■■■□□ 2.93
NKX2-1-204ENST00000522719 TSR2Q969E8 191 aaKnown RBP33.32■■■□□ 2.92
NKX2-1-204ENST00000522719 ZNF790Q6PG37 636 aa33.3■■■□□ 2.92
NKX2-1-204ENST00000522719 KCNQ2O43526 872 aa33.29■■■□□ 2.92
NKX2-1-204ENST00000522719 BTAF1O14981 1849 aa33.29■■■□□ 2.92
NKX2-1-204ENST00000522719 UBR2Q8IWV8 1755 aa33.29■■■□□ 2.92
NKX2-1-204ENST00000522719 TTC5Q8N0Z6 440 aa33.28■■■□□ 2.92
NKX2-1-204ENST00000522719 SLC39A6Q13433 755 aa33.27■■■□□ 2.92
NKX2-1-204ENST00000522719 BCL11BQ9C0K0 894 aaPredicted RBP33.27■■■□□ 2.92
NKX2-1-204ENST00000522719 EIF4A1P60842 406 aaKnown RBP33.24■■■□□ 2.91
NKX2-1-204ENST00000522719 ATG3Q9NT62 314 aa33.24■■■□□ 2.91
NKX2-1-204ENST00000522719 KCNQ3O43525 872 aa33.23■■■□□ 2.91
NKX2-1-204ENST00000522719 ASAP1Q9ULH1 1129 aa33.23■■■□□ 2.91
NKX2-1-204ENST00000522719 SMARCC1Q92922 1105 aaPredicted RBP33.22■■■□□ 2.91
NKX2-1-204ENST00000522719 EXOSC9Q06265 439 aaKnown RBP33.21■■■□□ 2.91
NKX2-1-204ENST00000522719 KCPQ6ZWJ8 1503 aa33.21■■■□□ 2.91
NKX2-1-204ENST00000522719 HEG1Q9ULI3 1381 aa33.19■■■□□ 2.9
NKX2-1-204ENST00000522719 TRIM37O94972 964 aa33.19■■■□□ 2.9
NKX2-1-204ENST00000522719 FMNL2Q96PY5 1086 aa33.19■■■□□ 2.9
NKX2-1-204ENST00000522719 SOS1Q07889 1333 aaPredicted RBP33.19■■■□□ 2.9
NKX2-1-204ENST00000522719 CT47B1P0C2W7 299 aaPredicted RBP33.19■■■□□ 2.9
NKX2-1-204ENST00000522719 PTF1AQ7RTS3 328 aa33.19■■■□□ 2.9
NKX2-1-204ENST00000522719 ZNF496Q96IT1 587 aaPredicted RBP33.18■■■□□ 2.9
NKX2-1-204ENST00000522719 C8orf58Q8NAV2 365 aa33.17■■■□□ 2.9
NKX2-1-204ENST00000522719 PALLDQ8WX93 1383 aa33.15■■■□□ 2.9
NKX2-1-204ENST00000522719 HOXB7P09629 217 aa33.15■■■□□ 2.9
NKX2-1-204ENST00000522719 TWISTNBQ3B726 338 aaPredicted RBP33.14■■■□□ 2.9
NKX2-1-204ENST00000522719 VSIG10Q8N0Z9 540 aa33.14■■■□□ 2.9
NKX2-1-204ENST00000522719 ZNF831Q5JPB2 1677 aa33.14■■■□□ 2.9
NKX2-1-204ENST00000522719 LY75O60449 1722 aa33.14■■■□□ 2.9
NKX2-1-204ENST00000522719 TNS1Q9HBL0 1735 aaKnown RBP33.13■■■□□ 2.89
NKX2-1-204ENST00000522719 PTCD1O75127 700 aaKnown RBP33.13■■■□□ 2.89
NKX2-1-204ENST00000522719 GIGYF1O75420 1035 aaPredicted RBP33.13■■■□□ 2.89
NKX2-1-204ENST00000522719 KRT24Q2M2I5 525 aa33.13■■■□□ 2.89
NKX2-1-204ENST00000522719 CENPBP07199 599 aaPredicted RBP33.12■■■□□ 2.89
NKX2-1-204ENST00000522719 TSPYL6Q8N831 410 aa33.12■■■□□ 2.89
NKX2-1-204ENST00000522719 EP400Q96L91 3159 aa33.12■■■□□ 2.89
NKX2-1-204ENST00000522719 SNRPA1P09661 255 aaKnown RBP33.11■■■□□ 2.89
NKX2-1-204ENST00000522719 ZNF428Q96B54 188 aa33.11■■■□□ 2.89
NKX2-1-204ENST00000522719 CICQ96RK0 1608 aaPredicted RBP33.11■■■□□ 2.89
NKX2-1-204ENST00000522719 C5P01031 1676 aa33.11■■■□□ 2.89
NKX2-1-204ENST00000522719 LAMB4A4D0S4 1761 aa33.11■■■□□ 2.89
NKX2-1-204ENST00000522719 RBM42Q9BTD8 480 aaKnown RBP33.11■■■□□ 2.89
NKX2-1-204ENST00000522719 CHMP4AQ9BY43 222 aa33.11■■■□□ 2.89
NKX2-1-204ENST00000522719 ELL2O00472 640 aaPredicted RBP33.1■■■□□ 2.89
NKX2-1-204ENST00000522719 VAMP4O75379 141 aa33.1■■■□□ 2.89
NKX2-1-204ENST00000522719 TEX13AQ9BXU3 409 aaPredicted RBP33.08■■■□□ 2.89
NKX2-1-204ENST00000522719 CACNA1FO60840 1977 aa33.07■■■□□ 2.89
NKX2-1-204ENST00000522719 LOC102724428A0A0B4J2F2 783 aa33.07■■■□□ 2.88
NKX2-1-204ENST00000522719 SIK1P57059 783 aa33.07■■■□□ 2.88
NKX2-1-204ENST00000522719 RGPD3A6NKT7 1758 aaPredicted RBP33.06■■■□□ 2.88
NKX2-1-204ENST00000522719 RGPD4Q7Z3J3 1758 aa33.06■■■□□ 2.88
NKX2-1-204ENST00000522719 TJP1Q07157 1748 aa33.05■■■□□ 2.88
NKX2-1-204ENST00000522719 PLSCR1O15162 318 aa33.04■■■□□ 2.88
NKX2-1-204ENST00000522719 SLC4A9Q96Q91 983 aa33.04■■■□□ 2.88
NKX2-1-204ENST00000522719 APBA3O96018 575 aa33.03■■■□□ 2.88
NKX2-1-204ENST00000522719 ATP6V1AP38606 617 aa33.02■■■□□ 2.88
NKX2-1-204ENST00000522719 PRAMEF22A3QJZ6 481 aa33.02■■■□□ 2.88
NKX2-1-204ENST00000522719 HDGFL1Q5TGJ6 251 aa33.01■■■□□ 2.87
NKX2-1-204ENST00000522719 CCDC30Q5VVM6 783 aa33.01■■■□□ 2.87
NKX2-1-204ENST00000522719 CCDC125Q86Z20 511 aa33.01■■■□□ 2.87
NKX2-1-204ENST00000522719 ALDH1L2Q3SY69 923 aa33■■■□□ 2.87
NKX2-1-204ENST00000522719 RCAN3Q9UKA8 241 aa33■■■□□ 2.87
NKX2-1-204ENST00000522719 USP16Q9Y5T5 823 aa33■■■□□ 2.87
NKX2-1-204ENST00000522719 COL5A3P25940 1745 aaPredicted RBP32.99■■■□□ 2.87
NKX2-1-204ENST00000522719 TAF1LQ8IZX4 1826 aa32.99■■■□□ 2.87
NKX2-1-204ENST00000522719 EIF2S2P20042 333 aaKnown RBP32.99■■■□□ 2.87
NKX2-1-204ENST00000522719 SF3B2Q13435 895 aaKnown RBP32.99■■■□□ 2.87
NKX2-1-204ENST00000522719 DNAJC10Q8IXB1 793 aa32.99■■■□□ 2.87
NKX2-1-204ENST00000522719 STARD3NLO95772 234 aa32.98■■■□□ 2.87
NKX2-1-204ENST00000522719 HMGB2P26583 209 aaKnown RBP32.98■■■□□ 2.87
NKX2-1-204ENST00000522719 RARSP54136 660 aaKnown RBP32.98■■■□□ 2.87
NKX2-1-204ENST00000522719 SLC27A3Q5K4L6 730 aa32.98■■■□□ 2.87
Retrieved 100 of 20,778 RNA–protein pairs in 71.8 ms