RNA–Protein interactions for RNA: ENST00000522501.1

CDKL3-208, Transcript of cyclin dependent kinase like 3, humanhuman

TSL 3

Gene CDKL3, Length 432 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL3-208ENST00000522501 TMC1Q8TDI8 760 aa12.13□□□□□ -0.47
CDKL3-208ENST00000522501 SLC12A5Q9H2X9 1139 aa12.13□□□□□ -0.47
CDKL3-208ENST00000522501 TERF2IPQ9NYB0 399 aa12.13□□□□□ -0.47
CDKL3-208ENST00000522501 TNRC6CQ9HCJ0 1690 aaKnown RBP12.13□□□□□ -0.47
CDKL3-208ENST00000522501 CGNL1Q0VF96 1302 aa12.12□□□□□ -0.47
CDKL3-208ENST00000522501 IGSF1Q8N6C5 1336 aa12.11□□□□□ -0.47
CDKL3-208ENST00000522501 FLAD1Q8NFF5 587 aa12.11□□□□□ -0.47
CDKL3-208ENST00000522501 ZNF526Q8TF50 670 aaPredicted RBP12.11□□□□□ -0.47
CDKL3-208ENST00000522501 NCAPD2Q15021 1401 aa12.11□□□□□ -0.47
CDKL3-208ENST00000522501 PCDH11XQ9BZA7 1347 aa12.11□□□□□ -0.47
CDKL3-208ENST00000522501 PCDH11YQ9BZA8 1340 aa12.11□□□□□ -0.47
CDKL3-208ENST00000522501 PXDNLA1KZ92 1463 aa12.1□□□□□ -0.47
CDKL3-208ENST00000522501 PUS7Q96PZ0 661 aaKnown RBP12.1□□□□□ -0.47
CDKL3-208ENST00000522501 SIN3AQ96ST3 1273 aa12.1□□□□□ -0.47
CDKL3-208ENST00000522501 SBF1O95248 1867 aa12.09□□□□□ -0.47
CDKL3-208ENST00000522501 KIF3CO14782 793 aa12.09□□□□□ -0.47
CDKL3-208ENST00000522501 AMPHP49418 695 aa12.09□□□□□ -0.47
CDKL3-208ENST00000522501 COG3Q96JB2 828 aa12.09□□□□□ -0.47
CDKL3-208ENST00000522501 CARD11Q9BXL7 1154 aa12.09□□□□□ -0.47
CDKL3-208ENST00000522501 HMGB2P26583 209 aaKnown RBP12.08□□□□□ -0.48
CDKL3-208ENST00000522501 NBPF6Q5VWK0 638 aa12.08□□□□□ -0.48
CDKL3-208ENST00000522501 AMIGO3Q86WK7 504 aa12.08□□□□□ -0.48
CDKL3-208ENST00000522501 NBPF4Q96M43 638 aa12.08□□□□□ -0.48
CDKL3-208ENST00000522501 C10orf71Q711Q0 1435 aa12.07□□□□□ -0.48
CDKL3-208ENST00000522501 USHBP1Q8N6Y0 703 aa12.07□□□□□ -0.48
CDKL3-208ENST00000522501 RAPGEF4Q8WZA2 1011 aa12.07□□□□□ -0.48
CDKL3-208ENST00000522501 AK7Q96M32 723 aa12.07□□□□□ -0.48
CDKL3-208ENST00000522501 INSRP06213 1382 aa12.06□□□□□ -0.48
CDKL3-208ENST00000522501 FLT4P35916 1363 aa12.06□□□□□ -0.48
CDKL3-208ENST00000522501 KIF24Q5T7B8 1368 aa12.06□□□□□ -0.48
CDKL3-208ENST00000522501 DLEC1Q9Y238 1755 aa12.06□□□□□ -0.48
CDKL3-208ENST00000522501 TATP17735 454 aaPredicted RBP12.06□□□□□ -0.48
CDKL3-208ENST00000522501 FBLN1P23142 703 aa12.06□□□□□ -0.48
CDKL3-208ENST00000522501 NUBP1P53384 320 aa12.06□□□□□ -0.48
CDKL3-208ENST00000522501 MYH14Q7Z406 1995 aaKnown RBP12.06□□□□□ -0.48
CDKL3-208ENST00000522501 VIRMAQ69YN4 1812 aaKnown RBP12.06□□□□□ -0.48
CDKL3-208ENST00000522501 SSFA2P28290 1259 aa12.05□□□□□ -0.48
CDKL3-208ENST00000522501 APLP1P51693 650 aa12.05□□□□□ -0.48
CDKL3-208ENST00000522501 NEUROD1Q13562 356 aa12.05□□□□□ -0.48
CDKL3-208ENST00000522501 RRS1Q15050 365 aaKnown RBP12.05□□□□□ -0.48
CDKL3-208ENST00000522501 WWC3Q9ULE0 1092 aa12.05□□□□□ -0.48
CDKL3-208ENST00000522501 TIAM2Q8IVF5 1701 aa12.05□□□□□ -0.48
CDKL3-208ENST00000522501 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.04□□□□□ -0.48
CDKL3-208ENST00000522501 CYP27B1O15528 508 aa12.04□□□□□ -0.48
CDKL3-208ENST00000522501 PHF14O94880 888 aa12.04□□□□□ -0.48
CDKL3-208ENST00000522501 SMARCC1Q92922 1105 aaPredicted RBP12.04□□□□□ -0.48
CDKL3-208ENST00000522501 TESK2Q96S53 571 aa12.04□□□□□ -0.48
CDKL3-208ENST00000522501 TJP1Q07157 1748 aa12.03□□□□□ -0.48
CDKL3-208ENST00000522501 ZNF316A6NFI3 1004 aaPredicted RBP12.03□□□□□ -0.48
CDKL3-208ENST00000522501 DIEXFQ68CQ4 756 aaKnown RBP12.03□□□□□ -0.48
CDKL3-208ENST00000522501 MPRIPQ6WCQ1 1025 aa12.03□□□□□ -0.48
CDKL3-208ENST00000522501 PCNTO95613 3336 aa12.03□□□□□ -0.48
CDKL3-208ENST00000522501 KDRP35968 1356 aa12.03□□□□□ -0.48
CDKL3-208ENST00000522501 CCDC88AQ3V6T2 1871 aa12.02□□□□□ -0.48
CDKL3-208ENST00000522501 ADAMTS7Q9UKP4 1686 aa12.02□□□□□ -0.49
CDKL3-208ENST00000522501 PLEKHG2Q9H7P9 1386 aa12.02□□□□□ -0.49
CDKL3-208ENST00000522501 FXR2P51116 673 aaKnown RBP eCLIP12.01□□□□□ -0.49
CDKL3-208ENST00000522501 SMIM5Q71RC9 77 aa12.01□□□□□ -0.49
CDKL3-208ENST00000522501 LINC00116Q8NCU8 138 aa12.01□□□□□ -0.49
CDKL3-208ENST00000522501 AFDNP55196 1824 aaKnown RBP12□□□□□ -0.49
CDKL3-208ENST00000522501 LOC102724428A0A0B4J2F2 783 aa12□□□□□ -0.49
CDKL3-208ENST00000522501 TOMM70O94826 608 aa12□□□□□ -0.49
CDKL3-208ENST00000522501 SIK1P57059 783 aa12□□□□□ -0.49
CDKL3-208ENST00000522501 DNAJC5GQ8N7S2 189 aa12□□□□□ -0.49
CDKL3-208ENST00000522501 PIGBQ92521 554 aa12□□□□□ -0.49
CDKL3-208ENST00000522501 FYB1O15117 783 aa11.99□□□□□ -0.49
CDKL3-208ENST00000522501 GNPATO15228 680 aa11.99□□□□□ -0.49
CDKL3-208ENST00000522501 ECM2O94769 699 aaPredicted RBP11.99□□□□□ -0.49
CDKL3-208ENST00000522501 NKX1-1Q15270 411 aaPredicted RBP11.99□□□□□ -0.49
CDKL3-208ENST00000522501 HSP90AB2PQ58FF8 381 aa11.99□□□□□ -0.49
CDKL3-208ENST00000522501 CHRDL2Q6WN34 429 aa11.99□□□□□ -0.49
CDKL3-208ENST00000522501 GGNBP2Q9H3C7 697 aa11.99□□□□□ -0.49
CDKL3-208ENST00000522501 SCN11AQ9UI33 1791 aa11.99□□□□□ -0.49
CDKL3-208ENST00000522501 KCPQ6ZWJ8 1503 aa11.98□□□□□ -0.49
CDKL3-208ENST00000522501 TONSLQ96HA7 1378 aa11.98□□□□□ -0.49
CDKL3-208ENST00000522501 MMP10P09238 476 aa11.98□□□□□ -0.49
CDKL3-208ENST00000522501 ITPK1Q13572 414 aa11.98□□□□□ -0.49
CDKL3-208ENST00000522501 GSE1Q14687 1217 aa11.98□□□□□ -0.49
CDKL3-208ENST00000522501 NRXN2Q9P2S2 1712 aa11.97□□□□□ -0.49
CDKL3-208ENST00000522501 ST20-MTHFSA0A0A6YYL1 179 aa11.97□□□□□ -0.49
CDKL3-208ENST00000522501 NMRK2Q9NPI5 230 aa11.97□□□□□ -0.49
CDKL3-208ENST00000522501 CIZ1Q9ULV3 898 aaPredicted RBP11.97□□□□□ -0.49
CDKL3-208ENST00000522501 DICER1Q9UPY3 1922 aaKnown RBP11.97□□□□□ -0.49
CDKL3-208ENST00000522501 TGFB2P61812 414 aa11.96□□□□□ -0.49
CDKL3-208ENST00000522501 CHADLQ6NUI6 762 aa11.96□□□□□ -0.49
CDKL3-208ENST00000522501 RBM46Q8TBY0 533 aaKnown RBP11.96□□□□□ -0.49
CDKL3-208ENST00000522501 TMOD3Q9NYL9 352 aa11.96□□□□□ -0.49
CDKL3-208ENST00000522501 SLC24A1O60721 1099 aa11.95□□□□□ -0.5
CDKL3-208ENST00000522501 JMYQ8N9B5 988 aa11.95□□□□□ -0.5
CDKL3-208ENST00000522501 BCS1LQ9Y276 419 aa11.95□□□□□ -0.5
CDKL3-208ENST00000522501 EMILIN1Q9Y6C2 1016 aa11.95□□□□□ -0.5
CDKL3-208ENST00000522501 ATP6V1AP38606 617 aa11.94□□□□□ -0.5
CDKL3-208ENST00000522501 KLRG1Q96E93 195 aa11.94□□□□□ -0.5
CDKL3-208ENST00000522501 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.94□□□□□ -0.5
CDKL3-208ENST00000522501 ASAP1Q9ULH1 1129 aa11.94□□□□□ -0.5
CDKL3-208ENST00000522501 SPG7Q9UQ90 795 aa11.94□□□□□ -0.5
CDKL3-208ENST00000522501 CACNA1SQ13698 1873 aa11.93□□□□□ -0.5
CDKL3-208ENST00000522501 CNTNAP4Q9C0A0 1308 aa11.93□□□□□ -0.5
CDKL3-208ENST00000522501 A0A0G2JLW4 131 aa11.93□□□□□ -0.5
CDKL3-208ENST00000522501 CENPBP07199 599 aaPredicted RBP11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms