RNA–Protein interactions for RNA: ENST00000522348.1

SPARC-205, Transcript of secreted protein acidic and cysteine rich, humanhuman

TSL 3

Gene SPARC, Length 497 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-205ENST00000522348 DCAF5Q96JK2 942 aa12.28□□□□□ -0.44
SPARC-205ENST00000522348 ZBTB40Q9NUA8 1239 aa12.28□□□□□ -0.44
SPARC-205ENST00000522348 PCDHB15Q9Y5E8 787 aa12.28□□□□□ -0.44
SPARC-205ENST00000522348 NHSL1Q5SYE7 1610 aa12.28□□□□□ -0.44
SPARC-205ENST00000522348 AHDC1Q5TGY3 1603 aaPredicted RBP12.28□□□□□ -0.44
SPARC-205ENST00000522348 LMO7Q8WWI1 1683 aa12.27□□□□□ -0.45
SPARC-205ENST00000522348 INTS3Q68E01 1043 aaKnown RBP12.27□□□□□ -0.45
SPARC-205ENST00000522348 ZCRB1Q8TBF4 217 aaKnown RBP12.27□□□□□ -0.45
SPARC-205ENST00000522348 CRYBG1Q9Y4K1 1723 aa12.27□□□□□ -0.45
SPARC-205ENST00000522348 ABCC4O15439 1325 aa12.27□□□□□ -0.45
SPARC-205ENST00000522348 HDAC1Q13547 482 aaPredicted RBP12.26□□□□□ -0.45
SPARC-205ENST00000522348 RGPD2P0DJD1 1756 aa12.25□□□□□ -0.45
SPARC-205ENST00000522348 IL2RBP14784 551 aa12.25□□□□□ -0.45
SPARC-205ENST00000522348 SLC52A2Q9HAB3 445 aa12.25□□□□□ -0.45
SPARC-205ENST00000522348 STRN4Q9NRL3 753 aa12.25□□□□□ -0.45
SPARC-205ENST00000522348 SPATA31A6Q5VVP1 1343 aa12.25□□□□□ -0.45
SPARC-205ENST00000522348 LRRC37A3O60309 1634 aa12.25□□□□□ -0.45
SPARC-205ENST00000522348 FAM208AQ9UK61 1670 aaKnown RBP12.25□□□□□ -0.45
SPARC-205ENST00000522348 CYP27B1O15528 508 aa12.24□□□□□ -0.45
SPARC-205ENST00000522348 CCT4P50991 539 aaKnown RBP12.24□□□□□ -0.45
SPARC-205ENST00000522348 COL16A1Q07092 1604 aaPredicted RBP12.24□□□□□ -0.45
SPARC-205ENST00000522348 HDGFL1Q5TGJ6 251 aa12.24□□□□□ -0.45
SPARC-205ENST00000522348 RGPD5Q99666 1765 aa12.24□□□□□ -0.45
SPARC-205ENST00000522348 BTG4Q9NY30 223 aa12.24□□□□□ -0.45
SPARC-205ENST00000522348 COL5A2P05997 1499 aaPredicted RBP12.23□□□□□ -0.45
SPARC-205ENST00000522348 NKX1-1Q15270 411 aaPredicted RBP12.23□□□□□ -0.45
SPARC-205ENST00000522348 LARP1Q6PKG0 1096 aaKnown RBP12.23□□□□□ -0.45
SPARC-205ENST00000522348 NFATC2IPQ8NCF5 419 aa12.23□□□□□ -0.45
SPARC-205ENST00000522348 MEGF6O75095 1541 aa12.22□□□□□ -0.45
SPARC-205ENST00000522348 PCDH11XQ9BZA7 1347 aa12.22□□□□□ -0.45
SPARC-205ENST00000522348 PCDH11YQ9BZA8 1340 aa12.22□□□□□ -0.45
SPARC-205ENST00000522348 ERVV-2B6SEH9 535 aa12.22□□□□□ -0.45
SPARC-205ENST00000522348 KCNQ3O43525 872 aa12.22□□□□□ -0.45
SPARC-205ENST00000522348 GIGYF1O75420 1035 aaPredicted RBP12.22□□□□□ -0.45
SPARC-205ENST00000522348 EIF2S2P20042 333 aaKnown RBP12.22□□□□□ -0.45
SPARC-205ENST00000522348 CABP4P57796 275 aa12.22□□□□□ -0.45
SPARC-205ENST00000522348 FLIIQ13045 1269 aa12.22□□□□□ -0.45
SPARC-205ENST00000522348 ZNF790Q6PG37 636 aa12.22□□□□□ -0.45
SPARC-205ENST00000522348 G2E3Q7L622 706 aa12.22□□□□□ -0.45
SPARC-205ENST00000522348 RBM19Q9Y4C8 960 aaKnown RBP12.22□□□□□ -0.45
SPARC-205ENST00000522348 HEG1Q9ULI3 1381 aa12.21□□□□□ -0.45
SPARC-205ENST00000522348 ADAMTS2O95450 1211 aa12.2□□□□□ -0.46
SPARC-205ENST00000522348 FKBP5Q13451 457 aaPredicted RBP12.2□□□□□ -0.46
SPARC-205ENST00000522348 RPAP2Q8IXW5 612 aaPredicted RBP12.2□□□□□ -0.46
SPARC-205ENST00000522348 NECTIN2Q92692 538 aa12.2□□□□□ -0.46
SPARC-205ENST00000522348 DBF4Q9UBU7 674 aaPredicted RBP12.2□□□□□ -0.46
SPARC-205ENST00000522348 SMC5Q8IY18 1101 aa12.19□□□□□ -0.46
SPARC-205ENST00000522348 TTC5Q8N0Z6 440 aa12.19□□□□□ -0.46
SPARC-205ENST00000522348 HYPKQ9NX55 129 aa12.19□□□□□ -0.46
SPARC-205ENST00000522348 PDE4AP27815 886 aa12.18□□□□□ -0.46
SPARC-205ENST00000522348 SLC4A10Q6U841 1118 aa12.18□□□□□ -0.46
SPARC-205ENST00000522348 DDX54Q8TDD1 881 aaKnown RBP12.18□□□□□ -0.46
SPARC-205ENST00000522348 GCC1Q96CN9 775 aa12.18□□□□□ -0.46
SPARC-205ENST00000522348 C8orf37Q96NL8 207 aa12.18□□□□□ -0.46
SPARC-205ENST00000522348 CDCA7Q9BWT1 371 aaPredicted RBP12.18□□□□□ -0.46
SPARC-205ENST00000522348 PDZRN3Q9UPQ7 1066 aa12.18□□□□□ -0.46
SPARC-205ENST00000522348 ADAMTS7Q9UKP4 1686 aa12.18□□□□□ -0.46
SPARC-205ENST00000522348 RGS12O14924 1447 aa12.18□□□□□ -0.46
SPARC-205ENST00000522348 KDM6AO15550 1401 aaPredicted RBP12.18□□□□□ -0.46
SPARC-205ENST00000522348 GNAI3P08754 354 aa12.17□□□□□ -0.46
SPARC-205ENST00000522348 SNRPA1P09661 255 aaKnown RBP12.17□□□□□ -0.46
SPARC-205ENST00000522348 NGLY1Q96IV0 654 aa12.17□□□□□ -0.46
SPARC-205ENST00000522348 FMNL2Q96PY5 1086 aa12.17□□□□□ -0.46
SPARC-205ENST00000522348 CHPF2Q9P2E5 772 aa12.17□□□□□ -0.46
SPARC-205ENST00000522348 THRAP3Q9Y2W1 955 aaKnown RBP12.17□□□□□ -0.46
SPARC-205ENST00000522348 COL22A1Q8NFW1 1626 aaPredicted RBP12.17□□□□□ -0.46
SPARC-205ENST00000522348 ABCA3Q99758 1704 aa12.17□□□□□ -0.46
SPARC-205ENST00000522348 COL14A1Q05707 1796 aaKnown RBP12.16□□□□□ -0.46
SPARC-205ENST00000522348 F6X3S4 739 aa12.16□□□□□ -0.46
SPARC-205ENST00000522348 EXOC5O00471 708 aa12.16□□□□□ -0.46
SPARC-205ENST00000522348 RGS3P49796 1198 aa12.16□□□□□ -0.46
SPARC-205ENST00000522348 SLC39A6Q13433 755 aa12.16□□□□□ -0.46
SPARC-205ENST00000522348 BACH2Q9BYV9 841 aa12.16□□□□□ -0.46
SPARC-205ENST00000522348 PHAXQ9H814 394 aaKnown RBP12.16□□□□□ -0.46
SPARC-205ENST00000522348 DDX21Q9NR30 783 aaKnown RBP eCLIP12.16□□□□□ -0.46
SPARC-205ENST00000522348 USP35Q9P2H5 1018 aa12.16□□□□□ -0.46
SPARC-205ENST00000522348 DDX58O95786 925 aaKnown RBP12.15□□□□□ -0.46
SPARC-205ENST00000522348 ANKRD44Q8N8A2 993 aa12.15□□□□□ -0.46
SPARC-205ENST00000522348 ZNF496Q96IT1 587 aaPredicted RBP12.15□□□□□ -0.46
SPARC-205ENST00000522348 KDM3BQ7LBC6 1761 aa12.15□□□□□ -0.46
SPARC-205ENST00000522348 PKD1L3Q7Z443 1732 aa12.14□□□□□ -0.47
SPARC-205ENST00000522348 HMMRO75330 724 aa12.14□□□□□ -0.47
SPARC-205ENST00000522348 GNAI2P04899 355 aa12.14□□□□□ -0.47
SPARC-205ENST00000522348 ZNF772Q68DY9 489 aaPredicted RBP12.14□□□□□ -0.47
SPARC-205ENST00000522348 KSR2Q6VAB6 950 aa12.14□□□□□ -0.47
SPARC-205ENST00000522348 DNAAF4Q8WXU2 420 aa12.14□□□□□ -0.47
SPARC-205ENST00000522348 SRCIN1Q9C0H9 1055 aa12.14□□□□□ -0.47
SPARC-205ENST00000522348 HDAC5Q9UQL6 1122 aa12.14□□□□□ -0.47
SPARC-205ENST00000522348 MRC1P22897 1456 aa12.14□□□□□ -0.47
SPARC-205ENST00000522348 LRP6O75581 1613 aa12.13□□□□□ -0.47
SPARC-205ENST00000522348 NUCB1Q02818 461 aa12.13□□□□□ -0.47
SPARC-205ENST00000522348 FAM161AQ3B820 660 aa12.13□□□□□ -0.47
SPARC-205ENST00000522348 SIRT2Q8IXJ6 389 aa12.13□□□□□ -0.47
SPARC-205ENST00000522348 MEIS3Q99687 375 aa12.13□□□□□ -0.47
SPARC-205ENST00000522348 DCTPP1Q9H773 170 aa12.13□□□□□ -0.47
SPARC-205ENST00000522348 C1orf115Q9H7X2 142 aa12.13□□□□□ -0.47
SPARC-205ENST00000522348 PARP4Q9UKK3 1724 aaKnown RBP12.13□□□□□ -0.47
SPARC-205ENST00000522348 PI4KAP2A4QPH2 592 aa12.12□□□□□ -0.47
SPARC-205ENST00000522348 PDIA6Q15084 440 aa12.12□□□□□ -0.47
SPARC-205ENST00000522348 BEND3Q5T5X7 828 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms