RNA–Protein interactions for RNA: ENST00000522321.5

SPIDR-219, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 4

Gene SPIDR, Length 760 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-219ENST00000522321 ERVV-2B6SEH9 535 aa15.95■□□□□ 0.14
SPIDR-219ENST00000522321 ONECUT3O60422 494 aaPredicted RBP15.95■□□□□ 0.14
SPIDR-219ENST00000522321 BAG6P46379 1132 aa15.95■□□□□ 0.14
SPIDR-219ENST00000522321 MARCH10Q8NA82 808 aaPredicted RBP15.95■□□□□ 0.14
SPIDR-219ENST00000522321 TSR2Q969E8 191 aaKnown RBP15.95■□□□□ 0.14
SPIDR-219ENST00000522321 DLG5Q8TDM6 1919 aa15.95■□□□□ 0.14
SPIDR-219ENST00000522321 MRC1P22897 1456 aa15.95■□□□□ 0.14
SPIDR-219ENST00000522321 TTC5Q8N0Z6 440 aa15.94■□□□□ 0.14
SPIDR-219ENST00000522321 BABAM1Q9NWV8 329 aa15.94■□□□□ 0.14
SPIDR-219ENST00000522321 SPINK5Q9NQ38 1064 aaPredicted RBP15.93■□□□□ 0.14
SPIDR-219ENST00000522321 MBIPQ9NS73 344 aa15.93■□□□□ 0.14
SPIDR-219ENST00000522321 PSDA5PKW4 1024 aaPredicted RBP15.92■□□□□ 0.14
SPIDR-219ENST00000522321 DUSP27Q5VZP5 1158 aa15.92■□□□□ 0.14
SPIDR-219ENST00000522321 NFATC2IPQ8NCF5 419 aa15.92■□□□□ 0.14
SPIDR-219ENST00000522321 ACSBG1Q96GR2 724 aa15.92■□□□□ 0.14
SPIDR-219ENST00000522321 ADAMTS7Q9UKP4 1686 aa15.92■□□□□ 0.14
SPIDR-219ENST00000522321 CHL1O00533 1208 aa15.91■□□□□ 0.14
SPIDR-219ENST00000522321 MIS18AQ9NYP9 233 aa15.91■□□□□ 0.14
SPIDR-219ENST00000522321 ZNF853P0CG23 659 aa15.9■□□□□ 0.14
SPIDR-219ENST00000522321 BRWD3Q6RI45 1802 aa15.89■□□□□ 0.13
SPIDR-219ENST00000522321 PRIM1P49642 420 aaKnown RBP15.89■□□□□ 0.13
SPIDR-219ENST00000522321 EXOSC9Q06265 439 aaKnown RBP15.89■□□□□ 0.13
SPIDR-219ENST00000522321 SCN11AQ9UI33 1791 aa15.89■□□□□ 0.13
SPIDR-219ENST00000522321 DOT1LQ8TEK3 1739 aa15.88■□□□□ 0.13
SPIDR-219ENST00000522321 FAM182BQ5T319 152 aa15.88■□□□□ 0.13
SPIDR-219ENST00000522321 FAM196AQ6ZSG2 479 aa15.88■□□□□ 0.13
SPIDR-219ENST00000522321 TRMT2AQ8IZ69 625 aaKnown RBP15.88■□□□□ 0.13
SPIDR-219ENST00000522321 TOGARAM1Q9Y4F4 1720 aa15.88■□□□□ 0.13
SPIDR-219ENST00000522321 ZNF790Q6PG37 636 aa15.87■□□□□ 0.13
SPIDR-219ENST00000522321 BCL9O00512 1426 aa15.86■□□□□ 0.13
SPIDR-219ENST00000522321 CT47B1P0C2W7 299 aaPredicted RBP15.86■□□□□ 0.13
SPIDR-219ENST00000522321 EN1Q05925 392 aaPredicted RBP15.86■□□□□ 0.13
SPIDR-219ENST00000522321 SLC39A6Q13433 755 aa15.86■□□□□ 0.13
SPIDR-219ENST00000522321 TWISTNBQ3B726 338 aaPredicted RBP15.86■□□□□ 0.13
SPIDR-219ENST00000522321 PIGBQ92521 554 aa15.86■□□□□ 0.13
SPIDR-219ENST00000522321 FMNL2Q96PY5 1086 aa15.86■□□□□ 0.13
SPIDR-219ENST00000522321 SRCAPQ6ZRS2 3230 aa15.85■□□□□ 0.13
SPIDR-219ENST00000522321 EP400Q96L91 3159 aa15.84■□□□□ 0.13
SPIDR-219ENST00000522321 ELL2O00472 640 aaPredicted RBP15.84■□□□□ 0.13
SPIDR-219ENST00000522321 SMARCC1Q92922 1105 aaPredicted RBP15.84■□□□□ 0.13
SPIDR-219ENST00000522321 CHMP4AQ9BY43 222 aa15.84■□□□□ 0.13
SPIDR-219ENST00000522321 KCNQ3O43525 872 aa15.83■□□□□ 0.12
SPIDR-219ENST00000522321 EIF4A1P60842 406 aaKnown RBP15.83■□□□□ 0.12
SPIDR-219ENST00000522321 RCAN3Q9UKA8 241 aa15.83■□□□□ 0.12
SPIDR-219ENST00000522321 SOS1Q07889 1333 aaPredicted RBP15.83■□□□□ 0.12
SPIDR-219ENST00000522321 SIPA1L3O60292 1781 aaPredicted RBP15.82■□□□□ 0.12
SPIDR-219ENST00000522321 KDM3BQ7LBC6 1761 aa15.82■□□□□ 0.12
SPIDR-219ENST00000522321 KCNQ2O43526 872 aa15.82■□□□□ 0.12
SPIDR-219ENST00000522321 PTCD1O75127 700 aaKnown RBP15.82■□□□□ 0.12
SPIDR-219ENST00000522321 R3HDM1Q15032 1099 aaKnown RBP15.82■□□□□ 0.12
SPIDR-219ENST00000522321 C8orf58Q8NAV2 365 aa15.82■□□□□ 0.12
SPIDR-219ENST00000522321 RBM42Q9BTD8 480 aaKnown RBP15.82■□□□□ 0.12
SPIDR-219ENST00000522321 NHSQ6T4R5 1651 aa15.82■□□□□ 0.12
SPIDR-219ENST00000522321 HOXB7P09629 217 aa15.81■□□□□ 0.12
SPIDR-219ENST00000522321 CANXP27824 592 aaKnown RBP15.81■□□□□ 0.12
SPIDR-219ENST00000522321 PAPPAQ13219 1627 aa15.81■□□□□ 0.12
SPIDR-219ENST00000522321 KRT24Q2M2I5 525 aa15.81■□□□□ 0.12
SPIDR-219ENST00000522321 HDGFL1Q5TGJ6 251 aa15.81■□□□□ 0.12
SPIDR-219ENST00000522321 PALLDQ8WX93 1383 aa15.81■□□□□ 0.12
SPIDR-219ENST00000522321 ZNF428Q96B54 188 aa15.81■□□□□ 0.12
SPIDR-219ENST00000522321 ZNF496Q96IT1 587 aaPredicted RBP15.81■□□□□ 0.12
SPIDR-219ENST00000522321 ATG3Q9NT62 314 aa15.81■□□□□ 0.12
SPIDR-219ENST00000522321 ASAP1Q9ULH1 1129 aa15.81■□□□□ 0.12
SPIDR-219ENST00000522321 HEG1Q9ULI3 1381 aa15.8■□□□□ 0.12
SPIDR-219ENST00000522321 SNRPA1P09661 255 aaKnown RBP15.8■□□□□ 0.12
SPIDR-219ENST00000522321 TSPYL6Q8N831 410 aa15.8■□□□□ 0.12
SPIDR-219ENST00000522321 STK31Q9BXU1 1019 aa15.8■□□□□ 0.12
SPIDR-219ENST00000522321 BCL11BQ9C0K0 894 aaPredicted RBP15.8■□□□□ 0.12
SPIDR-219ENST00000522321 SMC4Q9NTJ3 1288 aa15.8■□□□□ 0.12
SPIDR-219ENST00000522321 TRIM37O94972 964 aa15.79■□□□□ 0.12
SPIDR-219ENST00000522321 EIF2S2P20042 333 aaKnown RBP15.79■□□□□ 0.12
SPIDR-219ENST00000522321 VIRMAQ69YN4 1812 aaKnown RBP15.79■□□□□ 0.12
SPIDR-219ENST00000522321 KCPQ6ZWJ8 1503 aa15.78■□□□□ 0.12
SPIDR-219ENST00000522321 CCDC30Q5VVM6 783 aa15.78■□□□□ 0.12
SPIDR-219ENST00000522321 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.78■□□□□ 0.12
SPIDR-219ENST00000522321 NECTIN2Q92692 538 aa15.78■□□□□ 0.12
SPIDR-219ENST00000522321 BCL2L13Q9BXK5 485 aa15.78■□□□□ 0.12
SPIDR-219ENST00000522321 VAMP4O75379 141 aa15.77■□□□□ 0.12
SPIDR-219ENST00000522321 GIGYF1O75420 1035 aaPredicted RBP15.77■□□□□ 0.12
SPIDR-219ENST00000522321 APBA3O96018 575 aa15.77■□□□□ 0.12
SPIDR-219ENST00000522321 EZH2Q15910 746 aaKnown RBP15.77■□□□□ 0.12
SPIDR-219ENST00000522321 ALDH1L2Q3SY69 923 aa15.77■□□□□ 0.12
SPIDR-219ENST00000522321 TEX13AQ9BXU3 409 aaPredicted RBP15.77■□□□□ 0.12
SPIDR-219ENST00000522321 KIF16BQ96L93 1317 aa15.76■□□□□ 0.11
SPIDR-219ENST00000522321 ITGB4P16144 1822 aa15.76■□□□□ 0.11
SPIDR-219ENST00000522321 RARSP54136 660 aaKnown RBP15.76■□□□□ 0.11
SPIDR-219ENST00000522321 VSIG10Q8N0Z9 540 aa15.76■□□□□ 0.11
SPIDR-219ENST00000522321 LRP5O75197 1615 aa15.76■□□□□ 0.11
SPIDR-219ENST00000522321 LOC102724428A0A0B4J2F2 783 aa15.75■□□□□ 0.11
SPIDR-219ENST00000522321 TCERG1O14776 1098 aaKnown RBP15.75■□□□□ 0.11
SPIDR-219ENST00000522321 STARD3NLO95772 234 aa15.75■□□□□ 0.11
SPIDR-219ENST00000522321 ATP6V1AP38606 617 aa15.75■□□□□ 0.11
SPIDR-219ENST00000522321 SIK1P57059 783 aa15.75■□□□□ 0.11
SPIDR-219ENST00000522321 SSH1Q8WYL5 1049 aa15.74■□□□□ 0.11
SPIDR-219ENST00000522321 FRAT1Q92837 279 aaPredicted RBP15.74■□□□□ 0.11
SPIDR-219ENST00000522321 UBR2Q8IWV8 1755 aa15.73■□□□□ 0.11
SPIDR-219ENST00000522321 PRAMEF22A3QJZ6 481 aa15.73■□□□□ 0.11
SPIDR-219ENST00000522321 NEFLP07196 543 aa15.73■□□□□ 0.11
SPIDR-219ENST00000522321 PTF1AQ7RTS3 328 aa15.73■□□□□ 0.11
SPIDR-219ENST00000522321 DNAJC10Q8IXB1 793 aa15.73■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms