RNA–Protein interactions for RNA: ENST00000522136.5

CLK4-210, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 1,955 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-210ENST00000522136 NFATC2IPQ8NCF5 419 aa17.42■□□□□ 0.38
CLK4-210ENST00000522136 TOGARAM1Q9Y4F4 1720 aa17.41■□□□□ 0.38
CLK4-210ENST00000522136 SLC52A2Q9HAB3 445 aa17.41■□□□□ 0.38
CLK4-210ENST00000522136 FAM182BQ5T319 152 aa17.4■□□□□ 0.38
CLK4-210ENST00000522136 SIPA1L3O60292 1781 aaPredicted RBP17.4■□□□□ 0.38
CLK4-210ENST00000522136 RXRBP28702 533 aa17.4■□□□□ 0.38
CLK4-210ENST00000522136 CABP4P57796 275 aa17.4■□□□□ 0.38
CLK4-210ENST00000522136 TSPYL4Q9UJ04 414 aa17.4■□□□□ 0.38
CLK4-210ENST00000522136 BRWD3Q6RI45 1802 aa17.39■□□□□ 0.37
CLK4-210ENST00000522136 KCNQ3O43525 872 aa17.39■□□□□ 0.37
CLK4-210ENST00000522136 EXOSC9Q06265 439 aaKnown RBP17.39■□□□□ 0.37
CLK4-210ENST00000522136 BTBD11A6QL63 1104 aa17.38■□□□□ 0.37
CLK4-210ENST00000522136 ERVV-2B6SEH9 535 aa17.38■□□□□ 0.37
CLK4-210ENST00000522136 ITGB4P16144 1822 aa17.38■□□□□ 0.37
CLK4-210ENST00000522136 MRC1P22897 1456 aa17.38■□□□□ 0.37
CLK4-210ENST00000522136 SLC39A6Q13433 755 aa17.37■□□□□ 0.37
CLK4-210ENST00000522136 KRT24Q2M2I5 525 aa17.37■□□□□ 0.37
CLK4-210ENST00000522136 ACSBG1Q96GR2 724 aa17.37■□□□□ 0.37
CLK4-210ENST00000522136 DOT1LQ8TEK3 1739 aa17.37■□□□□ 0.37
CLK4-210ENST00000522136 PRIM1P49642 420 aaKnown RBP17.36■□□□□ 0.37
CLK4-210ENST00000522136 ELL2O00472 640 aaPredicted RBP17.35■□□□□ 0.37
CLK4-210ENST00000522136 TSPYL6Q8N831 410 aa17.35■□□□□ 0.37
CLK4-210ENST00000522136 C8orf58Q8NAV2 365 aa17.35■□□□□ 0.37
CLK4-210ENST00000522136 SYTL4Q96C24 671 aaPredicted RBP17.35■□□□□ 0.37
CLK4-210ENST00000522136 KDM3BQ7LBC6 1761 aa17.35■□□□□ 0.37
CLK4-210ENST00000522136 PIGBQ92521 554 aa17.35■□□□□ 0.37
CLK4-210ENST00000522136 BABAM1Q9NWV8 329 aa17.34■□□□□ 0.37
CLK4-210ENST00000522136 TMOD3Q9NYL9 352 aa17.34■□□□□ 0.37
CLK4-210ENST00000522136 KCNQ2O43526 872 aa17.33■□□□□ 0.37
CLK4-210ENST00000522136 KRT27Q7Z3Y8 459 aa17.33■□□□□ 0.37
CLK4-210ENST00000522136 RGS12O14924 1447 aa17.32■□□□□ 0.36
CLK4-210ENST00000522136 EIF4A1P60842 406 aaKnown RBP17.32■□□□□ 0.36
CLK4-210ENST00000522136 ZNF790Q6PG37 636 aa17.32■□□□□ 0.36
CLK4-210ENST00000522136 PTF1AQ7RTS3 328 aa17.31■□□□□ 0.36
CLK4-210ENST00000522136 BCL9O00512 1426 aa17.31■□□□□ 0.36
CLK4-210ENST00000522136 RCAN3Q9UKA8 241 aa17.31■□□□□ 0.36
CLK4-210ENST00000522136 ASAP1Q9ULH1 1129 aa17.31■□□□□ 0.36
CLK4-210ENST00000522136 TWISTNBQ3B726 338 aaPredicted RBP17.3■□□□□ 0.36
CLK4-210ENST00000522136 VAMP4O75379 141 aa17.29■□□□□ 0.36
CLK4-210ENST00000522136 TTC5Q8N0Z6 440 aa17.29■□□□□ 0.36
CLK4-210ENST00000522136 ZNF496Q96IT1 587 aaPredicted RBP17.29■□□□□ 0.36
CLK4-210ENST00000522136 ATG3Q9NT62 314 aa17.29■□□□□ 0.36
CLK4-210ENST00000522136 SBF2Q86WG5 1849 aa17.29■□□□□ 0.36
CLK4-210ENST00000522136 PAPPAQ13219 1627 aa17.28■□□□□ 0.36
CLK4-210ENST00000522136 TCERG1O14776 1098 aaKnown RBP17.28■□□□□ 0.36
CLK4-210ENST00000522136 PTCD1O75127 700 aaKnown RBP17.28■□□□□ 0.36
CLK4-210ENST00000522136 SUPT16HQ9Y5B9 1047 aaKnown RBP17.28■□□□□ 0.36
CLK4-210ENST00000522136 PRAMEF22A3QJZ6 481 aa17.27■□□□□ 0.36
CLK4-210ENST00000522136 BCL2L13Q9BXK5 485 aa17.27■□□□□ 0.36
CLK4-210ENST00000522136 RARSP54136 660 aaKnown RBP17.26■□□□□ 0.35
CLK4-210ENST00000522136 HEG1Q9ULI3 1381 aa17.26■□□□□ 0.35
CLK4-210ENST00000522136 BCAR3O75815 825 aa17.26■□□□□ 0.35
CLK4-210ENST00000522136 FAM196AQ6ZSG2 479 aa17.26■□□□□ 0.35
CLK4-210ENST00000522136 NECTIN2Q92692 538 aa17.26■□□□□ 0.35
CLK4-210ENST00000522136 UBR2Q8IWV8 1755 aa17.26■□□□□ 0.35
CLK4-210ENST00000522136 KCPQ6ZWJ8 1503 aa17.25■□□□□ 0.35
CLK4-210ENST00000522136 GIGYF1O75420 1035 aaPredicted RBP17.25■□□□□ 0.35
CLK4-210ENST00000522136 CT47B1P0C2W7 299 aaPredicted RBP17.25■□□□□ 0.35
CLK4-210ENST00000522136 FMNL2Q96PY5 1086 aa17.25■□□□□ 0.35
CLK4-210ENST00000522136 NHSQ6T4R5 1651 aa17.25■□□□□ 0.35
CLK4-210ENST00000522136 SSH1Q8WYL5 1049 aa17.24■□□□□ 0.35
CLK4-210ENST00000522136 RBM42Q9BTD8 480 aaKnown RBP17.24■□□□□ 0.35
CLK4-210ENST00000522136 C5P01031 1676 aa17.23■□□□□ 0.35
CLK4-210ENST00000522136 BTAF1O14981 1849 aa17.23■□□□□ 0.35
CLK4-210ENST00000522136 EIF2S2P20042 333 aaKnown RBP17.23■□□□□ 0.35
CLK4-210ENST00000522136 TRIM37O94972 964 aa17.22■□□□□ 0.35
CLK4-210ENST00000522136 SNRPA1P09661 255 aaKnown RBP17.22■□□□□ 0.35
CLK4-210ENST00000522136 USP16Q9Y5T5 823 aa17.22■□□□□ 0.35
CLK4-210ENST00000522136 SLC4A9Q96Q91 983 aa17.21■□□□□ 0.35
CLK4-210ENST00000522136 SMC4Q9NTJ3 1288 aa17.21■□□□□ 0.35
CLK4-210ENST00000522136 HDGFL1Q5TGJ6 251 aa17.2■□□□□ 0.34
CLK4-210ENST00000522136 BCL11BQ9C0K0 894 aaPredicted RBP17.2■□□□□ 0.34
CLK4-210ENST00000522136 PALLDQ8WX93 1383 aa17.2■□□□□ 0.34
CLK4-210ENST00000522136 PLIN1O60240 522 aa17.2■□□□□ 0.34
CLK4-210ENST00000522136 HOXB7P09629 217 aa17.2■□□□□ 0.34
CLK4-210ENST00000522136 ALDH1L2Q3SY69 923 aa17.19■□□□□ 0.34
CLK4-210ENST00000522136 ZNF428Q96B54 188 aa17.19■□□□□ 0.34
CLK4-210ENST00000522136 SOS1Q07889 1333 aaPredicted RBP17.19■□□□□ 0.34
CLK4-210ENST00000522136 CCDC30Q5VVM6 783 aa17.19■□□□□ 0.34
CLK4-210ENST00000522136 MRPL50Q8N5N7 158 aaKnown RBP17.19■□□□□ 0.34
CLK4-210ENST00000522136 SMARCC1Q92922 1105 aaPredicted RBP17.19■□□□□ 0.34
CLK4-210ENST00000522136 EP400Q96L91 3159 aa17.18■□□□□ 0.34
CLK4-210ENST00000522136 DNAJC10Q8IXB1 793 aa17.18■□□□□ 0.34
CLK4-210ENST00000522136 LOC102724428A0A0B4J2F2 783 aa17.17■□□□□ 0.34
CLK4-210ENST00000522136 SLC4A2P04920 1241 aa17.17■□□□□ 0.34
CLK4-210ENST00000522136 KCNQ4P56696 695 aa17.17■□□□□ 0.34
CLK4-210ENST00000522136 SIK1P57059 783 aa17.17■□□□□ 0.34
CLK4-210ENST00000522136 FRAT1Q92837 279 aaPredicted RBP17.17■□□□□ 0.34
CLK4-210ENST00000522136 ANXA1P04083 346 aa17.17■□□□□ 0.34
CLK4-210ENST00000522136 PIP4K2AP48426 406 aaPredicted RBP17.17■□□□□ 0.34
CLK4-210ENST00000522136 RRP1P56182 461 aaKnown RBP17.17■□□□□ 0.34
CLK4-210ENST00000522136 CHPF2Q9P2E5 772 aa17.17■□□□□ 0.34
CLK4-210ENST00000522136 RNF123Q5XPI4 1314 aa17.16■□□□□ 0.34
CLK4-210ENST00000522136 VSIG10Q8N0Z9 540 aa17.16■□□□□ 0.34
CLK4-210ENST00000522136 NOB1Q9ULX3 412 aaKnown RBP17.16■□□□□ 0.34
CLK4-210ENST00000522136 LAMB4A4D0S4 1761 aa17.15■□□□□ 0.34
CLK4-210ENST00000522136 ATP6V1AP38606 617 aa17.15■□□□□ 0.34
CLK4-210ENST00000522136 PROSER3Q2NL68 480 aa17.15■□□□□ 0.34
CLK4-210ENST00000522136 G2E3Q7L622 706 aa17.15■□□□□ 0.34
CLK4-210ENST00000522136 STK31Q9BXU1 1019 aa17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms