RNA–Protein interactions for RNA: ENST00000521724.5

CTNNA1-230, Transcript of catenin alpha 1, humanhuman

TSL 2

Gene CTNNA1, Length 2,741 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-230ENST00000521724 PRAM1Q96QH2 718 aa11.59□□□□□ -0.55
CTNNA1-230ENST00000521724 BCL11BQ9C0K0 894 aaPredicted RBP11.59□□□□□ -0.55
CTNNA1-230ENST00000521724 PIK3R4Q99570 1358 aa11.59□□□□□ -0.55
CTNNA1-230ENST00000521724 VGLL3A8MV65 326 aa11.59□□□□□ -0.55
CTNNA1-230ENST00000521724 ELL2O00472 640 aaPredicted RBP11.59□□□□□ -0.55
CTNNA1-230ENST00000521724 CCDC183Q5T5S1 534 aa11.59□□□□□ -0.55
CTNNA1-230ENST00000521724 THUMPD2Q9BTF0 503 aaKnown RBP11.59□□□□□ -0.55
CTNNA1-230ENST00000521724 APBB1O00213 710 aa11.58□□□□□ -0.56
CTNNA1-230ENST00000521724 VAMP4O75379 141 aa11.58□□□□□ -0.56
CTNNA1-230ENST00000521724 MTMR7Q9Y216 660 aa11.58□□□□□ -0.56
CTNNA1-230ENST00000521724 ABCC4O15439 1325 aa11.58□□□□□ -0.56
CTNNA1-230ENST00000521724 PTCH1Q13635 1447 aa11.58□□□□□ -0.56
CTNNA1-230ENST00000521724 MLH3Q9UHC1 1453 aa11.58□□□□□ -0.56
CTNNA1-230ENST00000521724 HECW2Q9P2P5 1572 aa11.58□□□□□ -0.56
CTNNA1-230ENST00000521724 SMARCA5O60264 1052 aaPredicted RBP11.58□□□□□ -0.56
CTNNA1-230ENST00000521724 GABPB1Q06547 395 aaPredicted RBP11.58□□□□□ -0.56
CTNNA1-230ENST00000521724 PYCARDQ9ULZ3 195 aa11.58□□□□□ -0.56
CTNNA1-230ENST00000521724 CD163L1Q9NR16 1453 aa11.58□□□□□ -0.56
CTNNA1-230ENST00000521724 ATAD2Q6PL18 1390 aa11.57□□□□□ -0.56
CTNNA1-230ENST00000521724 TPM3P06753 285 aa11.57□□□□□ -0.56
CTNNA1-230ENST00000521724 MX1P20591 662 aa11.57□□□□□ -0.56
CTNNA1-230ENST00000521724 CUL4AQ13619 759 aa11.57□□□□□ -0.56
CTNNA1-230ENST00000521724 FBXO31Q5XUX0 539 aaPredicted RBP11.57□□□□□ -0.56
CTNNA1-230ENST00000521724 PIAS4Q8N2W9 510 aaPredicted RBP11.57□□□□□ -0.56
CTNNA1-230ENST00000521724 TSPYL6Q8N831 410 aa11.57□□□□□ -0.56
CTNNA1-230ENST00000521724 INTS4Q96HW7 963 aaKnown RBP11.57□□□□□ -0.56
CTNNA1-230ENST00000521724 CABP1Q9NZU7 370 aa11.57□□□□□ -0.56
CTNNA1-230ENST00000521724 GOLGA6L6A8MZA4 724 aa11.56□□□□□ -0.56
CTNNA1-230ENST00000521724 NCBP1Q09161 790 aaKnown RBP11.56□□□□□ -0.56
CTNNA1-230ENST00000521724 SPC24Q8NBT2 197 aa11.56□□□□□ -0.56
CTNNA1-230ENST00000521724 PHACTR3Q96KR7 559 aa11.56□□□□□ -0.56
CTNNA1-230ENST00000521724 KCNF1Q9H3M0 494 aa11.56□□□□□ -0.56
CTNNA1-230ENST00000521724 DIAPH1O60610 1272 aaKnown RBP11.56□□□□□ -0.56
CTNNA1-230ENST00000521724 CYB5RLQ6IPT4 315 aa11.56□□□□□ -0.56
CTNNA1-230ENST00000521724 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.56□□□□□ -0.566e-7■■■□□ 16.3
CTNNA1-230ENST00000521724 IPO4Q8TEX9 1081 aaKnown RBP11.56□□□□□ -0.56
CTNNA1-230ENST00000521724 WDR33Q9C0J8 1336 aaKnown RBP11.55□□□□□ -0.56
CTNNA1-230ENST00000521724 CTNNA3Q9UI47 895 aa11.55□□□□□ -0.56
CTNNA1-230ENST00000521724 MYO5BQ9ULV0 1848 aa11.55□□□□□ -0.56
CTNNA1-230ENST00000521724 YEATS2Q9ULM3 1422 aa11.55□□□□□ -0.56
CTNNA1-230ENST00000521724 HMOX1P09601 288 aa11.55□□□□□ -0.56
CTNNA1-230ENST00000521724 CDK19Q9BWU1 502 aa11.55□□□□□ -0.56
CTNNA1-230ENST00000521724 API5Q9BZZ5 524 aaKnown RBP11.55□□□□□ -0.56
CTNNA1-230ENST00000521724 PIK3C2BO00750 1634 aa11.55□□□□□ -0.56
CTNNA1-230ENST00000521724 CCDC66A2RUB6 948 aa11.54□□□□□ -0.56
CTNNA1-230ENST00000521724 KCNJ4P48050 445 aa11.54□□□□□ -0.56
CTNNA1-230ENST00000521724 PTPRMP28827 1452 aa11.54□□□□□ -0.56
CTNNA1-230ENST00000521724 SLFN14P0C7P3 912 aa11.54□□□□□ -0.56
CTNNA1-230ENST00000521724 PRKAR2BP31323 418 aa11.54□□□□□ -0.56
CTNNA1-230ENST00000521724 MCCP23508 829 aa11.53□□□□□ -0.56
CTNNA1-230ENST00000521724 WAPLQ7Z5K2 1190 aa11.53□□□□□ -0.56
CTNNA1-230ENST00000521724 DDX41Q9UJV9 622 aaKnown RBP11.53□□□□□ -0.56
CTNNA1-230ENST00000521724 SYCP1Q15431 976 aa11.53□□□□□ -0.56
CTNNA1-230ENST00000521724 TWISTNBQ3B726 338 aaPredicted RBP11.53□□□□□ -0.56
CTNNA1-230ENST00000521724 RGS22Q8NE09 1264 aa11.53□□□□□ -0.56
CTNNA1-230ENST00000521724 TERF2IPQ9NYB0 399 aa11.53□□□□□ -0.56
CTNNA1-230ENST00000521724 POLKQ9UBT6 870 aa11.53□□□□□ -0.56
CTNNA1-230ENST00000521724 ZRANB1Q9UGI0 708 aa11.53□□□□□ -0.56
CTNNA1-230ENST00000521724 IRX5P78411 483 aaPredicted RBP11.52□□□□□ -0.56
CTNNA1-230ENST00000521724 ANKRD44Q8N8A2 993 aa11.52□□□□□ -0.56
CTNNA1-230ENST00000521724 C16orf45Q96MC5 204 aaPredicted RBP11.52□□□□□ -0.56
CTNNA1-230ENST00000521724 SRCIN1Q9C0H9 1055 aa11.52□□□□□ -0.56
CTNNA1-230ENST00000521724 CNPY2Q9Y2B0 182 aa11.52□□□□□ -0.56
CTNNA1-230ENST00000521724 PNPLA6Q8IY17 1366 aa11.52□□□□□ -0.56
CTNNA1-230ENST00000521724 KNDC1Q76NI1 1749 aa11.52□□□□□ -0.56
CTNNA1-230ENST00000521724 AP5Z1O43299 807 aa11.52□□□□□ -0.57
CTNNA1-230ENST00000521724 FCHSD2O94868 740 aa11.52□□□□□ -0.57
CTNNA1-230ENST00000521724 UBE2HP62256 183 aa11.52□□□□□ -0.57
CTNNA1-230ENST00000521724 GIMAP6Q6P9H5 292 aa11.52□□□□□ -0.57
CTNNA1-230ENST00000521724 GNAI1P63096 354 aa11.51□□□□□ -0.57
CTNNA1-230ENST00000521724 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.51□□□□□ -0.57
CTNNA1-230ENST00000521724 RPAP2Q8IXW5 612 aaPredicted RBP11.51□□□□□ -0.57
CTNNA1-230ENST00000521724 TMEM87AQ8NBN3 555 aa11.51□□□□□ -0.57
CTNNA1-230ENST00000521724 SMTNL1A8MU46 457 aa11.51□□□□□ -0.57
CTNNA1-230ENST00000521724 TERF2Q15554 542 aa11.51□□□□□ -0.57
CTNNA1-230ENST00000521724 UPF3BQ9BZI7 483 aaKnown RBP11.51□□□□□ -0.57
CTNNA1-230ENST00000521724 SLC24A3Q9HC58 644 aa11.51□□□□□ -0.57
CTNNA1-230ENST00000521724 EMILIN1Q9Y6C2 1016 aa11.51□□□□□ -0.57
CTNNA1-230ENST00000521724 YTHDC2Q9H6S0 1430 aaKnown RBP11.51□□□□□ -0.57
CTNNA1-230ENST00000521724 PTGS1P23219 599 aa11.51□□□□□ -0.57
CTNNA1-230ENST00000521724 MBIPQ9NS73 344 aa11.51□□□□□ -0.57
CTNNA1-230ENST00000521724 IFT57Q9NWB7 429 aa11.51□□□□□ -0.57
CTNNA1-230ENST00000521724 PALD1Q9ULE6 856 aa11.51□□□□□ -0.57
CTNNA1-230ENST00000521724 MORC2Q9Y6X9 1032 aaPredicted RBP11.51□□□□□ -0.57
CTNNA1-230ENST00000521724 NAA30Q147X3 362 aaPredicted RBP11.5□□□□□ -0.57
CTNNA1-230ENST00000521724 CEP85Q6P2H3 762 aa11.5□□□□□ -0.57
CTNNA1-230ENST00000521724 KRT222Q8N1A0 295 aa11.5□□□□□ -0.57
CTNNA1-230ENST00000521724 PLCD3Q8N3E9 789 aa11.5□□□□□ -0.57
CTNNA1-230ENST00000521724 CCDC112Q8NEF3 446 aa11.5□□□□□ -0.57
CTNNA1-230ENST00000521724 TIGD1Q96MW7 591 aa11.5□□□□□ -0.57
CTNNA1-230ENST00000521724 ANO2Q9NQ90 1003 aa11.5□□□□□ -0.57
CTNNA1-230ENST00000521724 FIBPO43427 364 aa11.5□□□□□ -0.57
CTNNA1-230ENST00000521724 TNNT1P13805 278 aa11.5□□□□□ -0.57
CTNNA1-230ENST00000521724 ANAPC15P60006 121 aa11.5□□□□□ -0.57
CTNNA1-230ENST00000521724 KIF18AQ8NI77 898 aa11.5□□□□□ -0.57
CTNNA1-230ENST00000521724 FUCA2Q9BTY2 467 aa11.5□□□□□ -0.57
CTNNA1-230ENST00000521724 SLC52A1Q9NWF4 448 aa11.5□□□□□ -0.57
CTNNA1-230ENST00000521724 NCKAP5LQ9HCH0 1330 aa11.49□□□□□ -0.57
CTNNA1-230ENST00000521724 RTL1A6NKG5 1358 aa11.49□□□□□ -0.57
CTNNA1-230ENST00000521724 KIF24Q5T7B8 1368 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms