RNA–Protein interactions for RNA: ENST00000521690.1

LAMA4-216, Transcript of laminin subunit alpha 4, humanhuman

TSL 4

Gene LAMA4, Length 539 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA4-216ENST00000521690 KRT27Q7Z3Y8 459 aa21.35■■□□□ 1.01
LAMA4-216ENST00000521690 TRMT2AQ8IZ69 625 aaKnown RBP21.35■■□□□ 1.01
LAMA4-216ENST00000521690 DOT1LQ8TEK3 1739 aa21.34■■□□□ 1.01
LAMA4-216ENST00000521690 CDCA7LQ96GN5 454 aa21.33■■□□□ 1.01
LAMA4-216ENST00000521690 SPINK5Q9NQ38 1064 aaPredicted RBP21.33■■□□□ 1.01
LAMA4-216ENST00000521690 NFATC2IPQ8NCF5 419 aa21.32■■□□□ 1
LAMA4-216ENST00000521690 ITGB4P16144 1822 aa21.32■■□□□ 1
LAMA4-216ENST00000521690 TMOD3Q9NYL9 352 aa21.31■■□□□ 1
LAMA4-216ENST00000521690 LAS1LQ9Y4W2 734 aaKnown RBP21.31■■□□□ 1
LAMA4-216ENST00000521690 KDM3BQ7LBC6 1761 aa21.31■■□□□ 1
LAMA4-216ENST00000521690 BTBD11A6QL63 1104 aa21.3■■□□□ 1
LAMA4-216ENST00000521690 DUSP27Q5VZP5 1158 aa21.3■■□□□ 1
LAMA4-216ENST00000521690 FAM196AQ6ZSG2 479 aa21.3■■□□□ 1
LAMA4-216ENST00000521690 MBIPQ9NS73 344 aa21.3■■□□□ 1
LAMA4-216ENST00000521690 TSPYL4Q9UJ04 414 aa21.3■■□□□ 1
LAMA4-216ENST00000521690 FANCIQ9NVI1 1328 aa21.29■■□□□ 1
LAMA4-216ENST00000521690 NHSQ6T4R5 1651 aa21.28■■□□□ 1
LAMA4-216ENST00000521690 PRIM1P49642 420 aaKnown RBP21.28■■□□□ 1
LAMA4-216ENST00000521690 PAPPAQ13219 1627 aa21.28■■□□□ 1
LAMA4-216ENST00000521690 TSR2Q969E8 191 aaKnown RBP21.27■■□□□ 1
LAMA4-216ENST00000521690 PIGBQ92521 554 aa21.26■□□□□ 0.99
LAMA4-216ENST00000521690 SBF2Q86WG5 1849 aa21.26■□□□□ 0.99
LAMA4-216ENST00000521690 ZNF790Q6PG37 636 aa21.25■□□□□ 0.99
LAMA4-216ENST00000521690 SYTL4Q96C24 671 aaPredicted RBP21.25■□□□□ 0.99
LAMA4-216ENST00000521690 MIS18AQ9NYP9 233 aa21.25■□□□□ 0.99
LAMA4-216ENST00000521690 SOCS7O14512 581 aa21.24■□□□□ 0.99
LAMA4-216ENST00000521690 CENPBP07199 599 aaPredicted RBP21.24■□□□□ 0.99
LAMA4-216ENST00000521690 TTC5Q8N0Z6 440 aa21.24■□□□□ 0.99
LAMA4-216ENST00000521690 ACSBG1Q96GR2 724 aa21.24■□□□□ 0.99
LAMA4-216ENST00000521690 SOS1Q07889 1333 aaPredicted RBP21.24■□□□□ 0.99
LAMA4-216ENST00000521690 UBR2Q8IWV8 1755 aa21.23■□□□□ 0.99
LAMA4-216ENST00000521690 CT47B1P0C2W7 299 aaPredicted RBP21.23■□□□□ 0.99
LAMA4-216ENST00000521690 FAM182BQ5T319 152 aa21.23■□□□□ 0.99
LAMA4-216ENST00000521690 ILDR2Q71H61 639 aa21.22■□□□□ 0.99
LAMA4-216ENST00000521690 EIF4A1P60842 406 aaKnown RBP21.21■□□□□ 0.99
LAMA4-216ENST00000521690 EXOSC9Q06265 439 aaKnown RBP21.21■□□□□ 0.99
LAMA4-216ENST00000521690 BCL11BQ9C0K0 894 aaPredicted RBP21.21■□□□□ 0.99
LAMA4-216ENST00000521690 KCNQ2O43526 872 aa21.2■□□□□ 0.98
LAMA4-216ENST00000521690 SLC39A6Q13433 755 aa21.2■□□□□ 0.98
LAMA4-216ENST00000521690 SMARCC1Q92922 1105 aaPredicted RBP21.2■□□□□ 0.98
LAMA4-216ENST00000521690 FMNL2Q96PY5 1086 aa21.2■□□□□ 0.98
LAMA4-216ENST00000521690 ATG3Q9NT62 314 aa21.2■□□□□ 0.98
LAMA4-216ENST00000521690 HEG1Q9ULI3 1381 aa21.2■□□□□ 0.98
LAMA4-216ENST00000521690 HOXB7P09629 217 aa21.19■□□□□ 0.98
LAMA4-216ENST00000521690 ZNF428Q96B54 188 aa21.19■□□□□ 0.98
LAMA4-216ENST00000521690 BTAF1O14981 1849 aa21.19■□□□□ 0.98
LAMA4-216ENST00000521690 KCPQ6ZWJ8 1503 aa21.19■□□□□ 0.98
LAMA4-216ENST00000521690 KCNQ3O43525 872 aa21.18■□□□□ 0.98
LAMA4-216ENST00000521690 CHMP4AQ9BY43 222 aa21.18■□□□□ 0.98
LAMA4-216ENST00000521690 ASAP1Q9ULH1 1129 aa21.18■□□□□ 0.98
LAMA4-216ENST00000521690 KAT6BQ8WYB5 2073 aa21.17■□□□□ 0.98
LAMA4-216ENST00000521690 TWISTNBQ3B726 338 aaPredicted RBP21.17■□□□□ 0.98
LAMA4-216ENST00000521690 VSIG10Q8N0Z9 540 aa21.17■□□□□ 0.98
LAMA4-216ENST00000521690 C8orf58Q8NAV2 365 aa21.17■□□□□ 0.98
LAMA4-216ENST00000521690 ZNF496Q96IT1 587 aaPredicted RBP21.17■□□□□ 0.98
LAMA4-216ENST00000521690 ZNF831Q5JPB2 1677 aa21.15■□□□□ 0.98
LAMA4-216ENST00000521690 SNRPA1P09661 255 aaKnown RBP21.15■□□□□ 0.98
LAMA4-216ENST00000521690 PALLDQ8WX93 1383 aa21.14■□□□□ 0.98
LAMA4-216ENST00000521690 VAMP4O75379 141 aa21.14■□□□□ 0.97
LAMA4-216ENST00000521690 GIGYF1O75420 1035 aaPredicted RBP21.14■□□□□ 0.97
LAMA4-216ENST00000521690 TSPYL6Q8N831 410 aa21.14■□□□□ 0.97
LAMA4-216ENST00000521690 CICQ96RK0 1608 aaPredicted RBP21.14■□□□□ 0.97
LAMA4-216ENST00000521690 TRIM37O94972 964 aa21.13■□□□□ 0.97
LAMA4-216ENST00000521690 KRT24Q2M2I5 525 aa21.13■□□□□ 0.97
LAMA4-216ENST00000521690 PTCD1O75127 700 aaKnown RBP21.12■□□□□ 0.97
LAMA4-216ENST00000521690 PTF1AQ7RTS3 328 aa21.12■□□□□ 0.97
LAMA4-216ENST00000521690 TEX13AQ9BXU3 409 aaPredicted RBP21.12■□□□□ 0.97
LAMA4-216ENST00000521690 LAMB4A4D0S4 1761 aa21.12■□□□□ 0.97
LAMA4-216ENST00000521690 ELL2O00472 640 aaPredicted RBP21.11■□□□□ 0.97
LAMA4-216ENST00000521690 LY75O60449 1722 aa21.11■□□□□ 0.97
LAMA4-216ENST00000521690 C5P01031 1676 aa21.1■□□□□ 0.97
LAMA4-216ENST00000521690 ALDH1L2Q3SY69 923 aa21.1■□□□□ 0.97
LAMA4-216ENST00000521690 RBM42Q9BTD8 480 aaKnown RBP21.1■□□□□ 0.97
LAMA4-216ENST00000521690 RCAN3Q9UKA8 241 aa21.1■□□□□ 0.97
LAMA4-216ENST00000521690 TNS1Q9HBL0 1735 aaKnown RBP21.09■□□□□ 0.97
LAMA4-216ENST00000521690 LOC102724428A0A0B4J2F2 783 aa21.09■□□□□ 0.97
LAMA4-216ENST00000521690 SIK1P57059 783 aa21.09■□□□□ 0.97
LAMA4-216ENST00000521690 HMGB2P26583 209 aaKnown RBP21.08■□□□□ 0.97
LAMA4-216ENST00000521690 CCDC30Q5VVM6 783 aa21.08■□□□□ 0.97
LAMA4-216ENST00000521690 RGPD3A6NKT7 1758 aaPredicted RBP21.08■□□□□ 0.96
LAMA4-216ENST00000521690 RGPD4Q7Z3J3 1758 aa21.08■□□□□ 0.96
LAMA4-216ENST00000521690 TJP1Q07157 1748 aa21.07■□□□□ 0.96
LAMA4-216ENST00000521690 PLSCR1O15162 318 aa21.07■□□□□ 0.96
LAMA4-216ENST00000521690 RARSP54136 660 aaKnown RBP21.07■□□□□ 0.96
LAMA4-216ENST00000521690 HDGFL1Q5TGJ6 251 aa21.07■□□□□ 0.96
LAMA4-216ENST00000521690 ERBB4Q15303 1308 aa21.06■□□□□ 0.96
LAMA4-216ENST00000521690 SLC4A9Q96Q91 983 aa21.06■□□□□ 0.96
LAMA4-216ENST00000521690 STARD3NLO95772 234 aa21.05■□□□□ 0.96
LAMA4-216ENST00000521690 ATP6V1AP38606 617 aa21.05■□□□□ 0.96
LAMA4-216ENST00000521690 BRPF1P55201 1214 aaPredicted RBP21.05■□□□□ 0.96
LAMA4-216ENST00000521690 STK31Q9BXU1 1019 aa21.05■□□□□ 0.96
LAMA4-216ENST00000521690 USP16Q9Y5T5 823 aa21.05■□□□□ 0.96
LAMA4-216ENST00000521690 PRAMEF22A3QJZ6 481 aa21.04■□□□□ 0.96
LAMA4-216ENST00000521690 APBA3O96018 575 aa21.04■□□□□ 0.96
LAMA4-216ENST00000521690 SLC27A3Q5K4L6 730 aa21.04■□□□□ 0.96
LAMA4-216ENST00000521690 CCDC125Q86Z20 511 aa21.04■□□□□ 0.96
LAMA4-216ENST00000521690 EIF2S2P20042 333 aaKnown RBP21.03■□□□□ 0.96
LAMA4-216ENST00000521690 DNAJC10Q8IXB1 793 aa21.03■□□□□ 0.96
LAMA4-216ENST00000521690 SSH1Q8WYL5 1049 aa21.03■□□□□ 0.96
LAMA4-216ENST00000521690 DBF4Q9UBU7 674 aaPredicted RBP21.03■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms