RNA–Protein interactions for RNA: ENST00000521283.1

TRIM35-204, Transcript of tripartite motif containing 35, humanhuman

TSL 2

Gene TRIM35, Length 619 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35-204ENST00000521283 NBPF14Q5TI25 921 aa13.93□□□□□ -0.18
TRIM35-204ENST00000521283 RAPGEF4Q8WZA2 1011 aa13.93□□□□□ -0.18
TRIM35-204ENST00000521283 PLEKHG2Q9H7P9 1386 aa13.93□□□□□ -0.18
TRIM35-204ENST00000521283 PDCD7Q8N8D1 485 aaKnown RBP13.92□□□□□ -0.18
TRIM35-204ENST00000521283 KAT6BQ8WYB5 2073 aa13.92□□□□□ -0.18
TRIM35-204ENST00000521283 KIF7Q2M1P5 1343 aa13.91□□□□□ -0.18
TRIM35-204ENST00000521283 FBLN1P23142 703 aa13.91□□□□□ -0.18
TRIM35-204ENST00000521283 GOLGA2Q08379 1002 aa13.91□□□□□ -0.18
TRIM35-204ENST00000521283 MKRN3Q13064 507 aaKnown RBP13.91□□□□□ -0.18
TRIM35-204ENST00000521283 HSP90AB2PQ58FF8 381 aa13.91□□□□□ -0.18
TRIM35-204ENST00000521283 ZCRB1Q8TBF4 217 aaKnown RBP13.91□□□□□ -0.18
TRIM35-204ENST00000521283 TATP17735 454 aaPredicted RBP13.9□□□□□ -0.18
TRIM35-204ENST00000521283 EZH2Q15910 746 aaKnown RBP13.9□□□□□ -0.18
TRIM35-204ENST00000521283 NBPF6Q5VWK0 638 aa13.9□□□□□ -0.18
TRIM35-204ENST00000521283 MORC1Q86VD1 984 aa13.9□□□□□ -0.18
TRIM35-204ENST00000521283 NBPF4Q96M43 638 aa13.9□□□□□ -0.18
TRIM35-204ENST00000521283 POLKQ9UBT6 870 aa13.9□□□□□ -0.18
TRIM35-204ENST00000521283 RGPD2P0DJD1 1756 aa13.89□□□□□ -0.19
TRIM35-204ENST00000521283 RREB1Q92766 1687 aa13.89□□□□□ -0.19
TRIM35-204ENST00000521283 PPM1GO15355 546 aaPredicted RBP13.89□□□□□ -0.19
TRIM35-204ENST00000521283 EMILIN1Q9Y6C2 1016 aa13.89□□□□□ -0.19
TRIM35-204ENST00000521283 NHSQ6T4R5 1651 aa13.88□□□□□ -0.19
TRIM35-204ENST00000521283 RNF25Q96BH1 459 aaPredicted RBP13.88□□□□□ -0.19
TRIM35-204ENST00000521283 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.88□□□□□ -0.19
TRIM35-204ENST00000521283 NPC1L1Q9UHC9 1359 aa13.87□□□□□ -0.19
TRIM35-204ENST00000521283 LCE2DQ5TA82 110 aaPredicted RBP13.87□□□□□ -0.19
TRIM35-204ENST00000521283 DDX54Q8TDD1 881 aaKnown RBP13.87□□□□□ -0.19
TRIM35-204ENST00000521283 NCAPD2Q15021 1401 aa13.87□□□□□ -0.19
TRIM35-204ENST00000521283 PCDH11XQ9BZA7 1347 aa13.87□□□□□ -0.19
TRIM35-204ENST00000521283 PCDH11YQ9BZA8 1340 aa13.87□□□□□ -0.19
TRIM35-204ENST00000521283 PER1O15534 1290 aaPredicted RBP13.85□□□□□ -0.19
TRIM35-204ENST00000521283 AMER1Q5JTC6 1135 aaPredicted RBP13.85□□□□□ -0.19
TRIM35-204ENST00000521283 SPG7Q9UQ90 795 aa13.85□□□□□ -0.19
TRIM35-204ENST00000521283 NUP188Q5SRE5 1749 aa13.84□□□□□ -0.19
TRIM35-204ENST00000521283 TNNT2P45379 298 aaPredicted RBP13.84□□□□□ -0.19
TRIM35-204ENST00000521283 MEGF6O75095 1541 aa13.84□□□□□ -0.19
TRIM35-204ENST00000521283 SLC27A3Q5K4L6 730 aa13.83□□□□□ -0.2
TRIM35-204ENST00000521283 SLAIN1Q8ND83 568 aa13.83□□□□□ -0.2
TRIM35-204ENST00000521283 EYA1Q99502 592 aa13.83□□□□□ -0.2
TRIM35-204ENST00000521283 EIF4A2Q14240 407 aaKnown RBP13.82□□□□□ -0.2
TRIM35-204ENST00000521283 BTAF1O14981 1849 aa13.82□□□□□ -0.2
TRIM35-204ENST00000521283 PKD1L3Q7Z443 1732 aa13.81□□□□□ -0.2
TRIM35-204ENST00000521283 SHANK3Q9BYB0 1731 aa13.81□□□□□ -0.2
TRIM35-204ENST00000521283 KCNQ2O43526 872 aa13.81□□□□□ -0.2
TRIM35-204ENST00000521283 ZEB1P37275 1124 aaPredicted RBP13.81□□□□□ -0.2
TRIM35-204ENST00000521283 R3HDM1Q15032 1099 aaKnown RBP13.81□□□□□ -0.2
TRIM35-204ENST00000521283 TXNRD1Q16881 649 aa13.81□□□□□ -0.2
TRIM35-204ENST00000521283 USHBP1Q8N6Y0 703 aa13.81□□□□□ -0.2
TRIM35-204ENST00000521283 FAM163AQ96GL9 167 aaPredicted RBP13.81□□□□□ -0.2
TRIM35-204ENST00000521283 ACSBG1Q96GR2 724 aa13.81□□□□□ -0.2
TRIM35-204ENST00000521283 LRP5O75197 1615 aa13.81□□□□□ -0.2
TRIM35-204ENST00000521283 POTEMA6NI47 508 aa13.8□□□□□ -0.2
TRIM35-204ENST00000521283 RIOK3O14730 519 aaKnown RBP13.8□□□□□ -0.2
TRIM35-204ENST00000521283 AMOTQ4VCS5 1084 aa13.8□□□□□ -0.2
TRIM35-204ENST00000521283 IGSF1Q8N6C5 1336 aa13.8□□□□□ -0.2
TRIM35-204ENST00000521283 HSP90AB1P08238 724 aaKnown RBP13.79□□□□□ -0.2
TRIM35-204ENST00000521283 PRIM1P49642 420 aaKnown RBP13.79□□□□□ -0.2
TRIM35-204ENST00000521283 NKX1-1Q15270 411 aaPredicted RBP13.79□□□□□ -0.2
TRIM35-204ENST00000521283 IFNL2Q8IZJ0 200 aa13.79□□□□□ -0.2
TRIM35-204ENST00000521283 STK32BQ9NY57 414 aa13.79□□□□□ -0.2
TRIM35-204ENST00000521283 DOT1LQ8TEK3 1739 aa13.78□□□□□ -0.2
TRIM35-204ENST00000521283 PSDA5PKW4 1024 aaPredicted RBP13.78□□□□□ -0.2
TRIM35-204ENST00000521283 PLEKHO1Q53GL0 409 aaPredicted RBP13.78□□□□□ -0.2
TRIM35-204ENST00000521283 DPY19L2Q6NUT2 758 aa13.78□□□□□ -0.2
TRIM35-204ENST00000521283 POTEGQ6S5H5 508 aa13.78□□□□□ -0.2
TRIM35-204ENST00000521283 SYTL4Q96C24 671 aaPredicted RBP13.78□□□□□ -0.2
TRIM35-204ENST00000521283 PTF1AQ7RTS3 328 aa13.77□□□□□ -0.21
TRIM35-204ENST00000521283 SMARCC1Q92922 1105 aaPredicted RBP13.77□□□□□ -0.21
TRIM35-204ENST00000521283 CYP27B1O15528 508 aa13.76□□□□□ -0.21
TRIM35-204ENST00000521283 MTHFSP49914 203 aa13.76□□□□□ -0.21
TRIM35-204ENST00000521283 SLC15A2Q16348 729 aa13.76□□□□□ -0.21
TRIM35-204ENST00000521283 EFCAB3Q8N7B9 438 aa13.76□□□□□ -0.21
TRIM35-204ENST00000521283 LY75O60449 1722 aa13.76□□□□□ -0.21
TRIM35-204ENST00000521283 KDRP35968 1356 aa13.75□□□□□ -0.21
TRIM35-204ENST00000521283 IL13P35225 146 aa13.75□□□□□ -0.21
TRIM35-204ENST00000521283 CC2D1BQ5T0F9 858 aaKnown RBP13.75□□□□□ -0.21
TRIM35-204ENST00000521283 L3MBTL3Q96JM7 780 aaPredicted RBP13.75□□□□□ -0.21
TRIM35-204ENST00000521283 SRCAPQ6ZRS2 3230 aa13.74□□□□□ -0.21
TRIM35-204ENST00000521283 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.74□□□□□ -0.21
TRIM35-204ENST00000521283 DIAPH1O60610 1272 aaKnown RBP13.74□□□□□ -0.21
TRIM35-204ENST00000521283 PHKG2P15735 406 aa13.74□□□□□ -0.21
TRIM35-204ENST00000521283 ZFP91Q96JP5 570 aaPredicted RBP13.74□□□□□ -0.21
TRIM35-204ENST00000521283 SPON1Q9HCB6 807 aa13.74□□□□□ -0.21
TRIM35-204ENST00000521283 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.74□□□□□ -0.21
TRIM35-204ENST00000521283 ITGB4P16144 1822 aa13.74□□□□□ -0.21
TRIM35-204ENST00000521283 ERVV-2B6SEH9 535 aa13.73□□□□□ -0.21
TRIM35-204ENST00000521283 DCAF5Q96JK2 942 aa13.73□□□□□ -0.21
TRIM35-204ENST00000521283 CFAP53Q96M91 514 aa13.73□□□□□ -0.21
TRIM35-204ENST00000521283 C1orf141Q5JVX7 400 aa13.72□□□□□ -0.21
TRIM35-204ENST00000521283 SULT6B1Q6IMI4 303 aa13.72□□□□□ -0.21
TRIM35-204ENST00000521283 MPRIPQ6WCQ1 1025 aa13.72□□□□□ -0.21
TRIM35-204ENST00000521283 SLC16A10Q8TF71 515 aa13.72□□□□□ -0.21
TRIM35-204ENST00000521283 TMOD3Q9NYL9 352 aa13.72□□□□□ -0.21
TRIM35-204ENST00000521283 QSER1Q2KHR3 1735 aa13.72□□□□□ -0.21
TRIM35-204ENST00000521283 CCNL1Q9UK58 526 aaPredicted RBP13.71□□□□□ -0.21
TRIM35-204ENST00000521283 PAPPAQ13219 1627 aa13.71□□□□□ -0.22
TRIM35-204ENST00000521283 FLAD1Q8NFF5 587 aa13.7□□□□□ -0.22
TRIM35-204ENST00000521283 ANO8Q9HCE9 1232 aaPredicted RBP13.7□□□□□ -0.22
TRIM35-204ENST00000521283 NUDCQ9Y266 331 aa13.7□□□□□ -0.22
TRIM35-204ENST00000521283 CASZ1Q86V15 1759 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms