RNA–Protein interactions for RNA: ENST00000521167.1

TRAPPC9-209, Transcript of trafficking protein particle complex 9, humanhuman

TSL 4

Gene TRAPPC9, Length 545 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-209ENST00000521167 DIAPH1O60610 1272 aaKnown RBP14.06□□□□□ -0.16
TRAPPC9-209ENST00000521167 SULT6B1Q6IMI4 303 aa14.06□□□□□ -0.16
TRAPPC9-209ENST00000521167 LRRC4BQ9NT99 713 aa14.06□□□□□ -0.16
TRAPPC9-209ENST00000521167 KDRP35968 1356 aa14.06□□□□□ -0.16
TRAPPC9-209ENST00000521167 PAPPAQ13219 1627 aa14.05□□□□□ -0.16
TRAPPC9-209ENST00000521167 TOGARAM1Q9Y4F4 1720 aa14.05□□□□□ -0.16
TRAPPC9-209ENST00000521167 HSP90AB1P08238 724 aaKnown RBP14.05□□□□□ -0.16
TRAPPC9-209ENST00000521167 MPRIPQ6WCQ1 1025 aa14.05□□□□□ -0.16
TRAPPC9-209ENST00000521167 SMARCC1Q92922 1105 aaPredicted RBP14.05□□□□□ -0.16
TRAPPC9-209ENST00000521167 CASZ1Q86V15 1759 aa14.04□□□□□ -0.16
TRAPPC9-209ENST00000521167 SRCAPQ6ZRS2 3230 aa14.04□□□□□ -0.16
TRAPPC9-209ENST00000521167 AEBP1Q8IUX7 1158 aa14.04□□□□□ -0.16
TRAPPC9-209ENST00000521167 SPON1Q9HCB6 807 aa14.04□□□□□ -0.16
TRAPPC9-209ENST00000521167 QSER1Q2KHR3 1735 aa14.04□□□□□ -0.16
TRAPPC9-209ENST00000521167 ERVV-2B6SEH9 535 aa14.03□□□□□ -0.16
TRAPPC9-209ENST00000521167 CNGB1Q14028 1251 aaPredicted RBP14.03□□□□□ -0.16
TRAPPC9-209ENST00000521167 FKBP8Q14318 412 aa14.03□□□□□ -0.16
TRAPPC9-209ENST00000521167 PIGBQ92521 554 aa14.03□□□□□ -0.16
TRAPPC9-209ENST00000521167 CCNL1Q9UK58 526 aaPredicted RBP14.03□□□□□ -0.16
TRAPPC9-209ENST00000521167 TAF1LQ8IZX4 1826 aa14.02□□□□□ -0.16
TRAPPC9-209ENST00000521167 ZNF530Q6P9A1 599 aaPredicted RBP14.02□□□□□ -0.17
TRAPPC9-209ENST00000521167 DCAF5Q96JK2 942 aa14.02□□□□□ -0.17
TRAPPC9-209ENST00000521167 TMOD3Q9NYL9 352 aa14.02□□□□□ -0.17
TRAPPC9-209ENST00000521167 C1orf141Q5JVX7 400 aa14.01□□□□□ -0.17
TRAPPC9-209ENST00000521167 CFAP53Q96M91 514 aa14.01□□□□□ -0.17
TRAPPC9-209ENST00000521167 PALLDQ8WX93 1383 aa14□□□□□ -0.17
TRAPPC9-209ENST00000521167 VIRMAQ69YN4 1812 aaKnown RBP14□□□□□ -0.17
TRAPPC9-209ENST00000521167 MNX1P50219 401 aaPredicted RBP14□□□□□ -0.17
TRAPPC9-209ENST00000521167 ZNF827Q17R98 1081 aa14□□□□□ -0.17
TRAPPC9-209ENST00000521167 COL3A1P02461 1466 aaPredicted RBP13.99□□□□□ -0.17
TRAPPC9-209ENST00000521167 SCN11AQ9UI33 1791 aa13.99□□□□□ -0.17
TRAPPC9-209ENST00000521167 HMOX1P09601 288 aa13.99□□□□□ -0.17
TRAPPC9-209ENST00000521167 CD44P16070 742 aaKnown RBP13.99□□□□□ -0.17
TRAPPC9-209ENST00000521167 PPP2R1AP30153 589 aa13.99□□□□□ -0.17
TRAPPC9-209ENST00000521167 ZEB1P37275 1124 aaPredicted RBP13.99□□□□□ -0.17
TRAPPC9-209ENST00000521167 KCNQ4P56696 695 aa13.99□□□□□ -0.17
TRAPPC9-209ENST00000521167 SLC16A10Q8TF71 515 aa13.99□□□□□ -0.17
TRAPPC9-209ENST00000521167 PDGFDQ9GZP0 370 aaPredicted RBP13.99□□□□□ -0.17
TRAPPC9-209ENST00000521167 TUBGCP6Q96RT7 1819 aa13.99□□□□□ -0.17
TRAPPC9-209ENST00000521167 C5P01031 1676 aa13.98□□□□□ -0.17
TRAPPC9-209ENST00000521167 AKAP4Q5JQC9 854 aa13.98□□□□□ -0.17
TRAPPC9-209ENST00000521167 MTFR1LQ9H019 292 aa13.98□□□□□ -0.17
TRAPPC9-209ENST00000521167 TFCP2L1Q9NZI6 479 aa13.98□□□□□ -0.17
TRAPPC9-209ENST00000521167 ZBTB7AO95365 584 aa13.97□□□□□ -0.17
TRAPPC9-209ENST00000521167 CABP4P57796 275 aa13.97□□□□□ -0.17
TRAPPC9-209ENST00000521167 NUDCQ9Y266 331 aa13.97□□□□□ -0.17
TRAPPC9-209ENST00000521167 LOC102724428A0A0B4J2F2 783 aa13.96□□□□□ -0.17
TRAPPC9-209ENST00000521167 U2SURPO15042 1029 aaKnown RBP13.96□□□□□ -0.17
TRAPPC9-209ENST00000521167 SIK1P57059 783 aa13.96□□□□□ -0.17
TRAPPC9-209ENST00000521167 ATG3Q9NT62 314 aa13.96□□□□□ -0.17
TRAPPC9-209ENST00000521167 PPP1R1BQ9UD71 204 aaPredicted RBP13.96□□□□□ -0.17
TRAPPC9-209ENST00000521167 ASAP1Q9ULH1 1129 aa13.96□□□□□ -0.17
TRAPPC9-209ENST00000521167 KDM6AO15550 1401 aaPredicted RBP13.96□□□□□ -0.18
TRAPPC9-209ENST00000521167 PNPLA7Q6ZV29 1317 aa13.95□□□□□ -0.18
TRAPPC9-209ENST00000521167 FLAD1Q8NFF5 587 aa13.95□□□□□ -0.18
TRAPPC9-209ENST00000521167 ZNF831Q5JPB2 1677 aa13.95□□□□□ -0.18
TRAPPC9-209ENST00000521167 PTGER2P43116 358 aa13.94□□□□□ -0.18
TRAPPC9-209ENST00000521167 COL24A1Q17RW2 1714 aa13.94□□□□□ -0.18
TRAPPC9-209ENST00000521167 MTHFSDQ2M296 383 aaKnown RBP13.94□□□□□ -0.18
TRAPPC9-209ENST00000521167 C4BP0C0L5 1744 aa13.93□□□□□ -0.18
TRAPPC9-209ENST00000521167 ATP6V1AP38606 617 aa13.93□□□□□ -0.18
TRAPPC9-209ENST00000521167 DDX10Q13206 875 aaKnown RBP13.93□□□□□ -0.18
TRAPPC9-209ENST00000521167 NFATC2IPQ8NCF5 419 aa13.93□□□□□ -0.18
TRAPPC9-209ENST00000521167 SGIP1Q9BQI5 828 aa13.93□□□□□ -0.18
TRAPPC9-209ENST00000521167 UBR3Q6ZT12 1888 aa13.93□□□□□ -0.18
TRAPPC9-209ENST00000521167 RNMTO43148 476 aaKnown RBP13.92□□□□□ -0.18
TRAPPC9-209ENST00000521167 FCHSD2O94868 740 aa13.92□□□□□ -0.18
TRAPPC9-209ENST00000521167 RALBP1Q15311 655 aa13.92□□□□□ -0.18
TRAPPC9-209ENST00000521167 GAS2L2Q8NHY3 880 aa13.92□□□□□ -0.18
TRAPPC9-209ENST00000521167 LGR6Q9HBX8 967 aa13.92□□□□□ -0.18
TRAPPC9-209ENST00000521167 ADAMTS7Q9UKP4 1686 aa13.91□□□□□ -0.18
TRAPPC9-209ENST00000521167 GABBR2O75899 941 aa13.91□□□□□ -0.18
TRAPPC9-209ENST00000521167 COL23A1Q86Y22 540 aaPredicted RBP13.91□□□□□ -0.18
TRAPPC9-209ENST00000521167 AK7Q96M32 723 aa13.91□□□□□ -0.18
TRAPPC9-209ENST00000521167 SLC52A2Q9HAB3 445 aa13.91□□□□□ -0.18
TRAPPC9-209ENST00000521167 U2AF1L5P0DN76 240 aaPredicted RBP13.9□□□□□ -0.18
TRAPPC9-209ENST00000521167 U2AF1Q01081 240 aaKnown RBP eCLIP13.9□□□□□ -0.18
TRAPPC9-209ENST00000521167 ITPK1Q13572 414 aa13.9□□□□□ -0.18
TRAPPC9-209ENST00000521167 LINC00116Q8NCU8 138 aa13.9□□□□□ -0.18
TRAPPC9-209ENST00000521167 RSPH6AQ9H0K4 717 aa13.9□□□□□ -0.18
TRAPPC9-209ENST00000521167 GNAT3A8MTJ3 354 aa13.89□□□□□ -0.19
TRAPPC9-209ENST00000521167 POLD1P28340 1107 aa13.89□□□□□ -0.19
TRAPPC9-209ENST00000521167 PRKAR2BP31323 418 aa13.89□□□□□ -0.19
TRAPPC9-209ENST00000521167 RC3H1Q5TC82 1133 aaKnown RBP13.89□□□□□ -0.19
TRAPPC9-209ENST00000521167 SLC4A9Q96Q91 983 aa13.89□□□□□ -0.19
TRAPPC9-209ENST00000521167 ARXQ96QS3 562 aa13.89□□□□□ -0.19
TRAPPC9-209ENST00000521167 MYH14Q7Z406 1995 aaKnown RBP13.89□□□□□ -0.19
TRAPPC9-209ENST00000521167 COL5A3P25940 1745 aaPredicted RBP13.88□□□□□ -0.19
TRAPPC9-209ENST00000521167 SSFA2P28290 1259 aa13.88□□□□□ -0.19
TRAPPC9-209ENST00000521167 MRC1P22897 1456 aa13.87□□□□□ -0.19
TRAPPC9-209ENST00000521167 MAP3K5Q99683 1374 aa13.87□□□□□ -0.19
TRAPPC9-209ENST00000521167 PHACTR3Q96KR7 559 aa13.87□□□□□ -0.19
TRAPPC9-209ENST00000521167 PTCD1O75127 700 aaKnown RBP13.86□□□□□ -0.19
TRAPPC9-209ENST00000521167 CLCN6P51797 869 aa13.86□□□□□ -0.19
TRAPPC9-209ENST00000521167 IL17REQ8NFR9 667 aa13.86□□□□□ -0.19
TRAPPC9-209ENST00000521167 CNTNAP4Q9C0A0 1308 aa13.86□□□□□ -0.19
TRAPPC9-209ENST00000521167 CICQ96RK0 1608 aaPredicted RBP13.86□□□□□ -0.19
TRAPPC9-209ENST00000521167 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.85□□□□□ -0.19
TRAPPC9-209ENST00000521167 GNPATO15228 680 aa13.85□□□□□ -0.19
TRAPPC9-209ENST00000521167 TEFQ10587 303 aa13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms