RNA–Protein interactions for RNA: ENST00000520957.1

CLK4-208, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best) BASIC

Gene CLK4, Length 1,690 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-208ENST00000520957 DOT1LQ8TEK3 1739 aa16.36■□□□□ 0.21
CLK4-208ENST00000520957 TNS1Q9HBL0 1735 aaKnown RBP16.36■□□□□ 0.21
CLK4-208ENST00000520957 NHSQ6T4R5 1651 aa16.35■□□□□ 0.21
CLK4-208ENST00000520957 CCER2I3L3R5 266 aa16.34■□□□□ 0.21
CLK4-208ENST00000520957 MIS18AQ9NYP9 233 aa16.34■□□□□ 0.21
CLK4-208ENST00000520957 TRIM35Q9UPQ4 493 aa16.34■□□□□ 0.21
CLK4-208ENST00000520957 CEMIPQ8WUJ3 1361 aa16.34■□□□□ 0.21
CLK4-208ENST00000520957 HTATSF1O43719 755 aaKnown RBP16.34■□□□□ 0.21
CLK4-208ENST00000520957 TEFQ10587 303 aa16.34■□□□□ 0.21
CLK4-208ENST00000520957 SLC4A9Q96Q91 983 aa16.34■□□□□ 0.21
CLK4-208ENST00000520957 PALLDQ8WX93 1383 aa16.33■□□□□ 0.21
CLK4-208ENST00000520957 KCNQ3O43525 872 aa16.33■□□□□ 0.2
CLK4-208ENST00000520957 PTCD1O75127 700 aaKnown RBP16.33■□□□□ 0.2
CLK4-208ENST00000520957 SRCAPQ6ZRS2 3230 aa16.32■□□□□ 0.2
CLK4-208ENST00000520957 RBM42Q9BTD8 480 aaKnown RBP16.31■□□□□ 0.2
CLK4-208ENST00000520957 CCNL1Q9UK58 526 aaPredicted RBP16.31■□□□□ 0.2
CLK4-208ENST00000520957 SALL2Q9Y467 1007 aaPredicted RBP16.31■□□□□ 0.2
CLK4-208ENST00000520957 BTAF1O14981 1849 aa16.31■□□□□ 0.2
CLK4-208ENST00000520957 LOC102724428A0A0B4J2F2 783 aa16.3■□□□□ 0.2
CLK4-208ENST00000520957 SIK1P57059 783 aa16.3■□□□□ 0.2
CLK4-208ENST00000520957 SMARCC1Q92922 1105 aaPredicted RBP16.3■□□□□ 0.2
CLK4-208ENST00000520957 ANO8Q9HCE9 1232 aaPredicted RBP16.3■□□□□ 0.2
CLK4-208ENST00000520957 BTBD11A6QL63 1104 aa16.29■□□□□ 0.2
CLK4-208ENST00000520957 ITPK1Q13572 414 aa16.29■□□□□ 0.2
CLK4-208ENST00000520957 TAF7Q15545 349 aaPredicted RBP16.29■□□□□ 0.2
CLK4-208ENST00000520957 ITGB4P16144 1822 aa16.28■□□□□ 0.2
CLK4-208ENST00000520957 SLC27A3Q5K4L6 730 aa16.28■□□□□ 0.2
CLK4-208ENST00000520957 ATP6V1AP38606 617 aa16.27■□□□□ 0.2
CLK4-208ENST00000520957 ZNF790Q6PG37 636 aa16.27■□□□□ 0.2
CLK4-208ENST00000520957 PSDA5PKW4 1024 aaPredicted RBP16.27■□□□□ 0.19
CLK4-208ENST00000520957 R3HDM1Q15032 1099 aaKnown RBP16.27■□□□□ 0.19
CLK4-208ENST00000520957 ZNF827Q17R98 1081 aa16.27■□□□□ 0.19
CLK4-208ENST00000520957 SMIM5Q71RC9 77 aa16.27■□□□□ 0.19
CLK4-208ENST00000520957 ZNF496Q96IT1 587 aaPredicted RBP16.27■□□□□ 0.19
CLK4-208ENST00000520957 MRC1P22897 1456 aa16.27■□□□□ 0.19
CLK4-208ENST00000520957 ADAMTS7Q9UKP4 1686 aa16.26■□□□□ 0.19
CLK4-208ENST00000520957 SCN11AQ9UI33 1791 aa16.26■□□□□ 0.19
CLK4-208ENST00000520957 LINC00116Q8NCU8 138 aa16.26■□□□□ 0.19
CLK4-208ENST00000520957 LMOD3Q0VAK6 560 aa16.24■□□□□ 0.19
CLK4-208ENST00000520957 TTC5Q8N0Z6 440 aa16.24■□□□□ 0.19
CLK4-208ENST00000520957 PDGFDQ9GZP0 370 aaPredicted RBP16.24■□□□□ 0.19
CLK4-208ENST00000520957 LAS1LQ9Y4W2 734 aaKnown RBP16.24■□□□□ 0.19
CLK4-208ENST00000520957 PRAMEF22A3QJZ6 481 aa16.24■□□□□ 0.19
CLK4-208ENST00000520957 NBPF14Q5TI25 921 aa16.24■□□□□ 0.19
CLK4-208ENST00000520957 AMIGO3Q86WK7 504 aa16.24■□□□□ 0.19
CLK4-208ENST00000520957 WWC1Q8IX03 1113 aa16.24■□□□□ 0.19
CLK4-208ENST00000520957 DNAJC10Q8IXB1 793 aa16.24■□□□□ 0.19
CLK4-208ENST00000520957 AKT1S1Q96B36 256 aa16.24■□□□□ 0.19
CLK4-208ENST00000520957 SLC15A2Q16348 729 aa16.23■□□□□ 0.19
CLK4-208ENST00000520957 DLG5Q8TDM6 1919 aa16.21■□□□□ 0.19
CLK4-208ENST00000520957 STK32BQ9NY57 414 aa16.21■□□□□ 0.19
CLK4-208ENST00000520957 CHL1O00533 1208 aa16.21■□□□□ 0.18
CLK4-208ENST00000520957 TSPYL4Q9UJ04 414 aa16.21■□□□□ 0.18
CLK4-208ENST00000520957 KCPQ6ZWJ8 1503 aa16.2■□□□□ 0.18
CLK4-208ENST00000520957 EIF4A1P60842 406 aaKnown RBP16.2■□□□□ 0.18
CLK4-208ENST00000520957 CCDC27Q2M243 656 aa16.2■□□□□ 0.18
CLK4-208ENST00000520957 KRT24Q2M2I5 525 aa16.2■□□□□ 0.18
CLK4-208ENST00000520957 FMNL2Q96PY5 1086 aa16.2■□□□□ 0.18
CLK4-208ENST00000520957 TFCP2L1Q9NZI6 479 aa16.2■□□□□ 0.18
CLK4-208ENST00000520957 USP16Q9Y5T5 823 aa16.2■□□□□ 0.18
CLK4-208ENST00000520957 CYP19A1P11511 503 aaPredicted RBP16.19■□□□□ 0.18
CLK4-208ENST00000520957 RREB1Q92766 1687 aa16.19■□□□□ 0.18
CLK4-208ENST00000520957 LY75O60449 1722 aa16.19■□□□□ 0.18
CLK4-208ENST00000520957 HEG1Q9ULI3 1381 aa16.18■□□□□ 0.18
CLK4-208ENST00000520957 ZNF853P0CG23 659 aa16.18■□□□□ 0.18
CLK4-208ENST00000520957 CRKLP46109 303 aaKnown RBP16.18■□□□□ 0.18
CLK4-208ENST00000520957 INTS5Q6P9B9 1019 aaKnown RBP16.18■□□□□ 0.18
CLK4-208ENST00000520957 CFAP44Q96MT7 982 aa16.18■□□□□ 0.18
CLK4-208ENST00000520957 SPINK5Q9NQ38 1064 aaPredicted RBP16.18■□□□□ 0.18
CLK4-208ENST00000520957 NUP188Q5SRE5 1749 aa16.18■□□□□ 0.18
CLK4-208ENST00000520957 VSIG10Q8N0Z9 540 aa16.18■□□□□ 0.18
CLK4-208ENST00000520957 MBIPQ9NS73 344 aa16.18■□□□□ 0.18
CLK4-208ENST00000520957 RGPD3A6NKT7 1758 aaPredicted RBP16.17■□□□□ 0.18
CLK4-208ENST00000520957 RGPD4Q7Z3J3 1758 aa16.17■□□□□ 0.18
CLK4-208ENST00000520957 GNPATO15228 680 aa16.17■□□□□ 0.18
CLK4-208ENST00000520957 PHF14O94880 888 aa16.17■□□□□ 0.18
CLK4-208ENST00000520957 AK7Q96M32 723 aa16.17■□□□□ 0.18
CLK4-208ENST00000520957 SIPA1L3O60292 1781 aaPredicted RBP16.16■□□□□ 0.18
CLK4-208ENST00000520957 GIGYF1O75420 1035 aaPredicted RBP16.16■□□□□ 0.18
CLK4-208ENST00000520957 A1BGP04217 495 aa16.16■□□□□ 0.18
CLK4-208ENST00000520957 SNRPA1P09661 255 aaKnown RBP16.16■□□□□ 0.18
CLK4-208ENST00000520957 PIP4K2AP48426 406 aaPredicted RBP16.16■□□□□ 0.18
CLK4-208ENST00000520957 TSR2Q969E8 191 aaKnown RBP16.16■□□□□ 0.18
CLK4-208ENST00000520957 PNPLA7Q6ZV29 1317 aa16.16■□□□□ 0.18
CLK4-208ENST00000520957 VIRMAQ69YN4 1812 aaKnown RBP16.16■□□□□ 0.18
CLK4-208ENST00000520957 NCBP3Q53F19 620 aaKnown RBP16.15■□□□□ 0.18
CLK4-208ENST00000520957 COL23A1Q86Y22 540 aaPredicted RBP16.15■□□□□ 0.18
CLK4-208ENST00000520957 IFT57Q9NWB7 429 aa16.15■□□□□ 0.18
CLK4-208ENST00000520957 PAPPAQ13219 1627 aa16.15■□□□□ 0.18
CLK4-208ENST00000520957 RC3H1Q5TC82 1133 aaKnown RBP16.14■□□□□ 0.18
CLK4-208ENST00000520957 BABAM1Q9NWV8 329 aa16.14■□□□□ 0.18
CLK4-208ENST00000520957 ZBTB1Q9Y2K1 713 aa16.14■□□□□ 0.18
CLK4-208ENST00000520957 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.14■□□□□ 0.17
CLK4-208ENST00000520957 STARD3NLO95772 234 aa16.14■□□□□ 0.17
CLK4-208ENST00000520957 CANXP27824 592 aaKnown RBP16.14■□□□□ 0.17
CLK4-208ENST00000520957 GNAI1P63096 354 aa16.14■□□□□ 0.17
CLK4-208ENST00000520957 ZNF521Q96K83 1311 aa16.14■□□□□ 0.17
CLK4-208ENST00000520957 ELL2O00472 640 aaPredicted RBP16.13■□□□□ 0.17
CLK4-208ENST00000520957 MSH5O43196 834 aa16.13■□□□□ 0.17
CLK4-208ENST00000520957 CALD1Q05682 793 aaKnown RBP16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms