RNA–Protein interactions for RNA: ENST00000520264.1

TRIM17-208, Transcript of tripartite motif containing 17, humanhuman

TSL 4

Gene TRIM17, Length 551 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM17-208ENST00000520264 AMIGO3Q86WK7 504 aa16.56■□□□□ 0.24
TRIM17-208ENST00000520264 IP6K1Q92551 441 aa16.56■□□□□ 0.24
TRIM17-208ENST00000520264 LTV1Q96GA3 475 aaPredicted RBP16.56■□□□□ 0.24
TRIM17-208ENST00000520264 NLRP2Q9NX02 1062 aa16.56■□□□□ 0.24
TRIM17-208ENST00000520264 RTL1A6NKG5 1358 aa16.55■□□□□ 0.24
TRIM17-208ENST00000520264 CCDC88AQ3V6T2 1871 aa16.55■□□□□ 0.24
TRIM17-208ENST00000520264 HOXC9P31274 260 aa16.55■□□□□ 0.24
TRIM17-208ENST00000520264 PRIM1P49642 420 aaKnown RBP16.55■□□□□ 0.24
TRIM17-208ENST00000520264 AMER1Q5JTC6 1135 aaPredicted RBP16.55■□□□□ 0.24
TRIM17-208ENST00000520264 PER1O15534 1290 aaPredicted RBP16.54■□□□□ 0.24
TRIM17-208ENST00000520264 ANKRD24Q8TF21 1146 aa16.54■□□□□ 0.24
TRIM17-208ENST00000520264 SYTL4Q96C24 671 aaPredicted RBP16.54■□□□□ 0.24
TRIM17-208ENST00000520264 SMG6Q86US8 1419 aaKnown RBP16.53■□□□□ 0.24
TRIM17-208ENST00000520264 C4AP0C0L4 1744 aa16.53■□□□□ 0.24
TRIM17-208ENST00000520264 FLT4P35916 1363 aa16.53■□□□□ 0.24
TRIM17-208ENST00000520264 SMC1BQ8NDV3 1235 aa16.53■□□□□ 0.24
TRIM17-208ENST00000520264 FLAD1Q8NFF5 587 aa16.53■□□□□ 0.24
TRIM17-208ENST00000520264 EMILIN1Q9Y6C2 1016 aa16.53■□□□□ 0.24
TRIM17-208ENST00000520264 KIF24Q5T7B8 1368 aa16.52■□□□□ 0.24
TRIM17-208ENST00000520264 MEGF6O75095 1541 aa16.51■□□□□ 0.23
TRIM17-208ENST00000520264 DDX10Q13206 875 aaKnown RBP16.51■□□□□ 0.23
TRIM17-208ENST00000520264 DDX54Q8TDD1 881 aaKnown RBP16.51■□□□□ 0.23
TRIM17-208ENST00000520264 KDM2BQ8NHM5 1336 aa16.5■□□□□ 0.23
TRIM17-208ENST00000520264 NPC1L1Q9UHC9 1359 aa16.5■□□□□ 0.23
TRIM17-208ENST00000520264 HSP90AB2PQ58FF8 381 aa16.49■□□□□ 0.23
TRIM17-208ENST00000520264 C9orf131Q5VYM1 1079 aa16.49■□□□□ 0.23
TRIM17-208ENST00000520264 POLKQ9UBT6 870 aa16.49■□□□□ 0.23
TRIM17-208ENST00000520264 INSRP06213 1382 aa16.49■□□□□ 0.23
TRIM17-208ENST00000520264 FOXN1O15353 648 aa16.48■□□□□ 0.23
TRIM17-208ENST00000520264 PRDM10Q9NQV6 1147 aa16.48■□□□□ 0.23
TRIM17-208ENST00000520264 BCS1LQ9Y276 419 aa16.48■□□□□ 0.23
TRIM17-208ENST00000520264 ZNF316A6NFI3 1004 aaPredicted RBP16.47■□□□□ 0.23
TRIM17-208ENST00000520264 ARHGAP27Q6ZUM4 889 aa16.47■□□□□ 0.23
TRIM17-208ENST00000520264 SMIM5Q71RC9 77 aa16.46■□□□□ 0.23
TRIM17-208ENST00000520264 RRAGCQ9HB90 399 aa16.46■□□□□ 0.23
TRIM17-208ENST00000520264 PALLDQ8WX93 1383 aa16.46■□□□□ 0.23
TRIM17-208ENST00000520264 DLEC1Q9Y238 1755 aa16.45■□□□□ 0.22
TRIM17-208ENST00000520264 COL5A3P25940 1745 aaPredicted RBP16.44■□□□□ 0.22
TRIM17-208ENST00000520264 DICER1Q9UPY3 1922 aaKnown RBP16.43■□□□□ 0.22
TRIM17-208ENST00000520264 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.43■□□□□ 0.22
TRIM17-208ENST00000520264 KDM6AO15550 1401 aaPredicted RBP16.43■□□□□ 0.22
TRIM17-208ENST00000520264 A0A0G2JLW4 131 aa16.42■□□□□ 0.22
TRIM17-208ENST00000520264 PHF14O94880 888 aa16.42■□□□□ 0.22
TRIM17-208ENST00000520264 MTHFSP49914 203 aa16.42■□□□□ 0.22
TRIM17-208ENST00000520264 TGFB2P61812 414 aa16.42■□□□□ 0.22
TRIM17-208ENST00000520264 USHBP1Q8N6Y0 703 aa16.42■□□□□ 0.22
TRIM17-208ENST00000520264 ABHD8Q96I13 439 aa16.42■□□□□ 0.22
TRIM17-208ENST00000520264 NBPF6Q5VWK0 638 aa16.41■□□□□ 0.22
TRIM17-208ENST00000520264 AK7Q96M32 723 aa16.41■□□□□ 0.22
TRIM17-208ENST00000520264 NBPF4Q96M43 638 aa16.41■□□□□ 0.22
TRIM17-208ENST00000520264 SSFA2P28290 1259 aa16.4■□□□□ 0.22
TRIM17-208ENST00000520264 MLLT1Q03111 559 aaPredicted RBP16.4■□□□□ 0.22
TRIM17-208ENST00000520264 EIF4A2Q14240 407 aaKnown RBP16.4■□□□□ 0.22
TRIM17-208ENST00000520264 RNF181Q9P0P0 153 aa16.4■□□□□ 0.22
TRIM17-208ENST00000520264 THSD7BQ9C0I4 1608 aa16.39■□□□□ 0.21
TRIM17-208ENST00000520264 FCHSD2O94868 740 aa16.39■□□□□ 0.21
TRIM17-208ENST00000520264 MMP10P09238 476 aa16.39■□□□□ 0.21
TRIM17-208ENST00000520264 RGS19P49795 217 aa16.39■□□□□ 0.21
TRIM17-208ENST00000520264 RAPGEF4Q8WZA2 1011 aa16.39■□□□□ 0.21
TRIM17-208ENST00000520264 ZNF831Q5JPB2 1677 aa16.39■□□□□ 0.21
TRIM17-208ENST00000520264 DPEP1P16444 411 aa16.38■□□□□ 0.21
TRIM17-208ENST00000520264 CFAP53Q96M91 514 aa16.38■□□□□ 0.21
TRIM17-208ENST00000520264 TATP17735 454 aaPredicted RBP16.37■□□□□ 0.21
TRIM17-208ENST00000520264 DCAF5Q96JK2 942 aa16.37■□□□□ 0.21
TRIM17-208ENST00000520264 EYA1Q99502 592 aa16.37■□□□□ 0.21
TRIM17-208ENST00000520264 ZC3H4Q9UPT8 1303 aaKnown RBP16.37■□□□□ 0.21
TRIM17-208ENST00000520264 CNTNAP1P78357 1384 aa16.37■□□□□ 0.21
TRIM17-208ENST00000520264 KCNA3P22001 575 aa16.36■□□□□ 0.21
TRIM17-208ENST00000520264 HMGB2P26583 209 aaKnown RBP16.36■□□□□ 0.21
TRIM17-208ENST00000520264 PPP2R1AP30153 589 aa16.36■□□□□ 0.21
TRIM17-208ENST00000520264 CTCFP49711 727 aaPredicted RBP16.36■□□□□ 0.21
TRIM17-208ENST00000520264 ZCRB1Q8TBF4 217 aaKnown RBP16.36■□□□□ 0.21
TRIM17-208ENST00000520264 MKRN1Q9UHC7 482 aaKnown RBP16.36■□□□□ 0.21
TRIM17-208ENST00000520264 MYH14Q7Z406 1995 aaKnown RBP16.35■□□□□ 0.21
TRIM17-208ENST00000520264 DIAPH1O60610 1272 aaKnown RBP16.35■□□□□ 0.21
TRIM17-208ENST00000520264 CREBZFQ9NS37 354 aa16.35■□□□□ 0.21
TRIM17-208ENST00000520264 RALBP1Q15311 655 aa16.34■□□□□ 0.21
TRIM17-208ENST00000520264 LINC00116Q8NCU8 138 aa16.33■□□□□ 0.2
TRIM17-208ENST00000520264 AFDNP55196 1824 aaKnown RBP16.33■□□□□ 0.2
TRIM17-208ENST00000520264 U2SURPO15042 1029 aaKnown RBP16.32■□□□□ 0.2
TRIM17-208ENST00000520264 VEGFAP15692 232 aaPredicted RBP16.32■□□□□ 0.2
TRIM17-208ENST00000520264 IL13P35225 146 aa16.32■□□□□ 0.2
TRIM17-208ENST00000520264 LBX1P52954 281 aa16.32■□□□□ 0.2
TRIM17-208ENST00000520264 NCAPD2Q15021 1401 aa16.32■□□□□ 0.2
TRIM17-208ENST00000520264 COL3A1P02461 1466 aaPredicted RBP16.3■□□□□ 0.2
TRIM17-208ENST00000520264 SULT6B1Q6IMI4 303 aa16.3■□□□□ 0.2
TRIM17-208ENST00000520264 NUDCQ9Y266 331 aa16.3■□□□□ 0.2
TRIM17-208ENST00000520264 FER1L6Q2WGJ9 1857 aa16.29■□□□□ 0.2
TRIM17-208ENST00000520264 GLTPD2A6NH11 291 aa16.29■□□□□ 0.2
TRIM17-208ENST00000520264 AIDAQ96BJ3 306 aa16.29■□□□□ 0.2
TRIM17-208ENST00000520264 SPG7Q9UQ90 795 aa16.29■□□□□ 0.2
TRIM17-208ENST00000520264 ADAMTS7Q9UKP4 1686 aa16.29■□□□□ 0.2
TRIM17-208ENST00000520264 LTBP1Q14766 1721 aa16.28■□□□□ 0.2
TRIM17-208ENST00000520264 MYBBP1AQ9BQG0 1328 aaKnown RBP16.28■□□□□ 0.2
TRIM17-208ENST00000520264 PCDH11XQ9BZA7 1347 aa16.28■□□□□ 0.2
TRIM17-208ENST00000520264 PCDH11YQ9BZA8 1340 aa16.28■□□□□ 0.2
TRIM17-208ENST00000520264 POTECB2RU33 542 aa16.28■□□□□ 0.2
TRIM17-208ENST00000520264 GNPATO15228 680 aa16.28■□□□□ 0.2
TRIM17-208ENST00000520264 HMOX1P09601 288 aa16.28■□□□□ 0.2
TRIM17-208ENST00000520264 HSPA8P11142 646 aaKnown RBP16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms