RNA–Protein interactions for RNA: ENST00000520105.5

PTP4A3-203, Transcript of protein tyrosine phosphatase type IVA, member 3, humanhuman

TSL 5 BASIC

Gene PTP4A3, Length 1,866 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A3-203ENST00000520105 KRT24Q2M2I5 525 aa27.81■■■□□ 2.04
PTP4A3-203ENST00000520105 TSPYL6Q8N831 410 aa27.81■■■□□ 2.04
PTP4A3-203ENST00000520105 C8orf58Q8NAV2 365 aa27.81■■■□□ 2.04
PTP4A3-203ENST00000520105 BABAM1Q9NWV8 329 aa27.81■■■□□ 2.04
PTP4A3-203ENST00000520105 CABP4P57796 275 aa27.8■■■□□ 2.04
PTP4A3-203ENST00000520105 KCNQ3O43525 872 aa27.79■■■□□ 2.04
PTP4A3-203ENST00000520105 KAT6BQ8WYB5 2073 aa27.79■■■□□ 2.04
PTP4A3-203ENST00000520105 ONECUT3O60422 494 aaPredicted RBP27.78■■■□□ 2.04
PTP4A3-203ENST00000520105 SIPA1L3O60292 1781 aaPredicted RBP27.78■■■□□ 2.04
PTP4A3-203ENST00000520105 ERVV-2B6SEH9 535 aa27.78■■■□□ 2.04
PTP4A3-203ENST00000520105 THSD7AQ9UPZ6 1657 aa27.76■■■□□ 2.04
PTP4A3-203ENST00000520105 SLC39A6Q13433 755 aa27.76■■■□□ 2.03
PTP4A3-203ENST00000520105 MRC1P22897 1456 aa27.76■■■□□ 2.03
PTP4A3-203ENST00000520105 SEPT12Q8IYM1 358 aa27.75■■■□□ 2.03
PTP4A3-203ENST00000520105 VAMP4O75379 141 aa27.74■■■□□ 2.03
PTP4A3-203ENST00000520105 TWISTNBQ3B726 338 aaPredicted RBP27.74■■■□□ 2.03
PTP4A3-203ENST00000520105 TOGARAM1Q9Y4F4 1720 aa27.74■■■□□ 2.03
PTP4A3-203ENST00000520105 CT47B1P0C2W7 299 aaPredicted RBP27.73■■■□□ 2.03
PTP4A3-203ENST00000520105 RGS17Q9UGC6 210 aaPredicted RBP27.73■■■□□ 2.03
PTP4A3-203ENST00000520105 KDM3BQ7LBC6 1761 aa27.72■■■□□ 2.03
PTP4A3-203ENST00000520105 RARSP54136 660 aaKnown RBP27.72■■■□□ 2.03
PTP4A3-203ENST00000520105 BCAR3O75815 825 aa27.72■■■□□ 2.03
PTP4A3-203ENST00000520105 EIF4A1P60842 406 aaKnown RBP27.72■■■□□ 2.03
PTP4A3-203ENST00000520105 ZNF790Q6PG37 636 aa27.72■■■□□ 2.03
PTP4A3-203ENST00000520105 RBM6P78332 1123 aaKnown RBP27.71■■■□□ 2.03
PTP4A3-203ENST00000520105 BCL2L13Q9BXK5 485 aa27.7■■■□□ 2.03
PTP4A3-203ENST00000520105 TMOD3Q9NYL9 352 aa27.7■■■□□ 2.03
PTP4A3-203ENST00000520105 SYTL4Q96C24 671 aaPredicted RBP27.7■■■□□ 2.02
PTP4A3-203ENST00000520105 PRIM1P49642 420 aaKnown RBP27.69■■■□□ 2.02
PTP4A3-203ENST00000520105 FAM182BQ5T319 152 aa27.69■■■□□ 2.02
PTP4A3-203ENST00000520105 ILDR1Q86SU0 546 aaPredicted RBP27.69■■■□□ 2.02
PTP4A3-203ENST00000520105 PIGBQ92521 554 aa27.69■■■□□ 2.02
PTP4A3-203ENST00000520105 ACSBG1Q96GR2 724 aa27.69■■■□□ 2.02
PTP4A3-203ENST00000520105 ITGB4P16144 1822 aa27.68■■■□□ 2.02
PTP4A3-203ENST00000520105 SSH1Q8WYL5 1049 aa27.67■■■□□ 2.02
PTP4A3-203ENST00000520105 TCERG1O14776 1098 aaKnown RBP27.66■■■□□ 2.02
PTP4A3-203ENST00000520105 RNF123Q5XPI4 1314 aa27.66■■■□□ 2.02
PTP4A3-203ENST00000520105 TTC5Q8N0Z6 440 aa27.66■■■□□ 2.02
PTP4A3-203ENST00000520105 DOT1LQ8TEK3 1739 aa27.65■■■□□ 2.02
PTP4A3-203ENST00000520105 PLIN1O60240 522 aa27.65■■■□□ 2.02
PTP4A3-203ENST00000520105 POTEAQ6S8J7 498 aa27.65■■■□□ 2.02
PTP4A3-203ENST00000520105 RXRBP28702 533 aa27.64■■■□□ 2.02
PTP4A3-203ENST00000520105 ZNF496Q96IT1 587 aaPredicted RBP27.64■■■□□ 2.02
PTP4A3-203ENST00000520105 RRP1P56182 461 aaKnown RBP27.64■■■□□ 2.01
PTP4A3-203ENST00000520105 ZNF428Q96B54 188 aa27.64■■■□□ 2.01
PTP4A3-203ENST00000520105 SMC4Q9NTJ3 1288 aa27.64■■■□□ 2.01
PTP4A3-203ENST00000520105 BCL9O00512 1426 aa27.63■■■□□ 2.01
PTP4A3-203ENST00000520105 ASAP1Q9ULH1 1129 aa27.63■■■□□ 2.01
PTP4A3-203ENST00000520105 KCNQ2O43526 872 aa27.62■■■□□ 2.01
PTP4A3-203ENST00000520105 HEG1Q9ULI3 1381 aa27.62■■■□□ 2.01
PTP4A3-203ENST00000520105 PRAMEF22A3QJZ6 481 aa27.61■■■□□ 2.01
PTP4A3-203ENST00000520105 GIGYF1O75420 1035 aaPredicted RBP27.61■■■□□ 2.01
PTP4A3-203ENST00000520105 IRX6P78412 446 aaPredicted RBP27.61■■■□□ 2.01
PTP4A3-203ENST00000520105 ALDH1L2Q3SY69 923 aa27.61■■■□□ 2.01
PTP4A3-203ENST00000520105 NECTIN2Q92692 538 aa27.61■■■□□ 2.01
PTP4A3-203ENST00000520105 ATG3Q9NT62 314 aa27.6■■■□□ 2.01
PTP4A3-203ENST00000520105 BRWD3Q6RI45 1802 aa27.59■■■□□ 2.01
PTP4A3-203ENST00000520105 PTCD1O75127 700 aaKnown RBP27.59■■■□□ 2.01
PTP4A3-203ENST00000520105 FRAT1Q92837 279 aaPredicted RBP27.59■■■□□ 2.01
PTP4A3-203ENST00000520105 FMNL2Q96PY5 1086 aa27.59■■■□□ 2.01
PTP4A3-203ENST00000520105 EIF2S2P20042 333 aaKnown RBP27.58■■■□□ 2.01
PTP4A3-203ENST00000520105 KRT27Q7Z3Y8 459 aa27.58■■■□□ 2.01
PTP4A3-203ENST00000520105 SOS1Q07889 1333 aaPredicted RBP27.57■■■□□ 2
PTP4A3-203ENST00000520105 MRPL50Q8N5N7 158 aaKnown RBP27.57■■■□□ 2
PTP4A3-203ENST00000520105 PAPPAQ13219 1627 aa27.56■■■□□ 2
PTP4A3-203ENST00000520105 HOXB7P09629 217 aa27.56■■■□□ 2
PTP4A3-203ENST00000520105 HDGFL1Q5TGJ6 251 aa27.56■■■□□ 2
PTP4A3-203ENST00000520105 PTF1AQ7RTS3 328 aa27.56■■■□□ 2
PTP4A3-203ENST00000520105 CCDC30Q5VVM6 783 aa27.55■■■□□ 2
PTP4A3-203ENST00000520105 SNRPA1P09661 255 aaKnown RBP27.54■■■□□ 2
PTP4A3-203ENST00000520105 PELP1Q8IZL8 1130 aaKnown RBP27.54■■■□□ 2
PTP4A3-203ENST00000520105 GOLGA6L2Q8N9W4 650 aaPredicted RBP27.54■■■□□ 2
PTP4A3-203ENST00000520105 KCPQ6ZWJ8 1503 aa27.54■■■□□ 2
PTP4A3-203ENST00000520105 UBR2Q8IWV8 1755 aa27.54■■■□□ 2
PTP4A3-203ENST00000520105 SLC4A2P04920 1241 aa27.53■■■□□ 2
PTP4A3-203ENST00000520105 NEFLP07196 543 aa27.53■■■□□ 2
PTP4A3-203ENST00000520105 NOB1Q9ULX3 412 aaKnown RBP27.53■■■□□ 2
PTP4A3-203ENST00000520105 GTF3C3Q9Y5Q9 886 aa27.53■■■□□ 2
PTP4A3-203ENST00000520105 EP400Q96L91 3159 aa27.53■■■□□ 2
PTP4A3-203ENST00000520105 CANXP27824 592 aaKnown RBP27.52■■■□□ 2
PTP4A3-203ENST00000520105 BRPF1P55201 1214 aaPredicted RBP27.52■■■□□ 2
PTP4A3-203ENST00000520105 RBM42Q9BTD8 480 aaKnown RBP27.52■■■□□ 2
PTP4A3-203ENST00000520105 USP16Q9Y5T5 823 aa27.52■■■□□ 2
PTP4A3-203ENST00000520105 FKBP8Q14318 412 aa27.51■■□□□ 1.99
PTP4A3-203ENST00000520105 C20orf194Q5TEA3 1177 aa27.51■■□□□ 1.99
PTP4A3-203ENST00000520105 STK31Q9BXU1 1019 aa27.51■■□□□ 1.99
PTP4A3-203ENST00000520105 C5P01031 1676 aa27.51■■□□□ 1.99
PTP4A3-203ENST00000520105 RGS12O14924 1447 aa27.5■■□□□ 1.99
PTP4A3-203ENST00000520105 TNNQ9UQP3 1299 aa27.5■■□□□ 1.99
PTP4A3-203ENST00000520105 FAM196AQ6ZSG2 479 aa27.49■■□□□ 1.99
PTP4A3-203ENST00000520105 CHPF2Q9P2E5 772 aa27.49■■□□□ 1.99
PTP4A3-203ENST00000520105 KIF16BQ96L93 1317 aa27.48■■□□□ 1.99
PTP4A3-203ENST00000520105 ZKSCAN2Q63HK3 967 aa27.48■■□□□ 1.99
PTP4A3-203ENST00000520105 SBF2Q86WG5 1849 aa27.48■■□□□ 1.99
PTP4A3-203ENST00000520105 G2E3Q7L622 706 aa27.47■■□□□ 1.99
PTP4A3-203ENST00000520105 SLC4A9Q96Q91 983 aa27.47■■□□□ 1.99
PTP4A3-203ENST00000520105 CHMP4AQ9BY43 222 aa27.47■■□□□ 1.99
PTP4A3-203ENST00000520105 ANXA1P04083 346 aa27.46■■□□□ 1.99
PTP4A3-203ENST00000520105 CLUAP1Q96AJ1 413 aa27.46■■□□□ 1.99
PTP4A3-203ENST00000520105 NHSQ6T4R5 1651 aa27.45■■□□□ 1.98
Retrieved 100 of 20,778 RNA–protein pairs in 184 ms