RNA–Protein interactions for RNA: ENST00000519770.1

IGHV3-52-201, Transcript of immunoglobulin heavy variable 3-52 (pseudogene), humanhuman

BASIC

Gene IGHV3-52, Length 353 nt, Biotype IG V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-52-201ENST00000519770 SCN11AQ9UI33 1791 aa22.72■■□□□ 1.23
IGHV3-52-201ENST00000519770 MARCH10Q8NA82 808 aaPredicted RBP22.72■■□□□ 1.23
IGHV3-52-201ENST00000519770 NFATC2IPQ8NCF5 419 aa22.72■■□□□ 1.23
IGHV3-52-201ENST00000519770 TTC5Q8N0Z6 440 aa22.71■■□□□ 1.23
IGHV3-52-201ENST00000519770 SYTL4Q96C24 671 aaPredicted RBP22.71■■□□□ 1.23
IGHV3-52-201ENST00000519770 MIS18AQ9NYP9 233 aa22.7■■□□□ 1.22
IGHV3-52-201ENST00000519770 ADAMTS7Q9UKP4 1686 aa22.69■■□□□ 1.22
IGHV3-52-201ENST00000519770 CT47B1P0C2W7 299 aaPredicted RBP22.69■■□□□ 1.22
IGHV3-52-201ENST00000519770 VIRMAQ69YN4 1812 aaKnown RBP22.68■■□□□ 1.22
IGHV3-52-201ENST00000519770 EXOSC9Q06265 439 aaKnown RBP22.68■■□□□ 1.22
IGHV3-52-201ENST00000519770 KRT27Q7Z3Y8 459 aa22.68■■□□□ 1.22
IGHV3-52-201ENST00000519770 CHMP4AQ9BY43 222 aa22.67■■□□□ 1.22
IGHV3-52-201ENST00000519770 RGS17Q9UGC6 210 aaPredicted RBP22.67■■□□□ 1.22
IGHV3-52-201ENST00000519770 MRC1P22897 1456 aa22.66■■□□□ 1.22
IGHV3-52-201ENST00000519770 PRIM1P49642 420 aaKnown RBP22.65■■□□□ 1.22
IGHV3-52-201ENST00000519770 POTEAQ6S8J7 498 aa22.65■■□□□ 1.22
IGHV3-52-201ENST00000519770 KAT6BQ8WYB5 2073 aa22.65■■□□□ 1.22
IGHV3-52-201ENST00000519770 ZNF790Q6PG37 636 aa22.64■■□□□ 1.21
IGHV3-52-201ENST00000519770 FAM196AQ6ZSG2 479 aa22.64■■□□□ 1.21
IGHV3-52-201ENST00000519770 ACSBG1Q96GR2 724 aa22.64■■□□□ 1.21
IGHV3-52-201ENST00000519770 SOS1Q07889 1333 aaPredicted RBP22.63■■□□□ 1.21
IGHV3-52-201ENST00000519770 TWISTNBQ3B726 338 aaPredicted RBP22.63■■□□□ 1.21
IGHV3-52-201ENST00000519770 ZNF428Q96B54 188 aa22.63■■□□□ 1.21
IGHV3-52-201ENST00000519770 RCAN3Q9UKA8 241 aa22.63■■□□□ 1.21
IGHV3-52-201ENST00000519770 ELL2O00472 640 aaPredicted RBP22.61■■□□□ 1.21
IGHV3-52-201ENST00000519770 SLC39A6Q13433 755 aa22.61■■□□□ 1.21
IGHV3-52-201ENST00000519770 PIGBQ92521 554 aa22.61■■□□□ 1.21
IGHV3-52-201ENST00000519770 FMNL2Q96PY5 1086 aa22.61■■□□□ 1.21
IGHV3-52-201ENST00000519770 SIPA1L3O60292 1781 aaPredicted RBP22.61■■□□□ 1.21
IGHV3-52-201ENST00000519770 EIF4A1P60842 406 aaKnown RBP22.6■■□□□ 1.21
IGHV3-52-201ENST00000519770 BCL9O00512 1426 aa22.59■■□□□ 1.21
IGHV3-52-201ENST00000519770 C8orf58Q8NAV2 365 aa22.59■■□□□ 1.21
IGHV3-52-201ENST00000519770 SMARCC1Q92922 1105 aaPredicted RBP22.59■■□□□ 1.21
IGHV3-52-201ENST00000519770 DOT1LQ8TEK3 1739 aa22.59■■□□□ 1.21
IGHV3-52-201ENST00000519770 TOGARAM1Q9Y4F4 1720 aa22.58■■□□□ 1.21
IGHV3-52-201ENST00000519770 HOXB7P09629 217 aa22.58■■□□□ 1.21
IGHV3-52-201ENST00000519770 KDM3BQ7LBC6 1761 aa22.58■■□□□ 1.2
IGHV3-52-201ENST00000519770 KCNQ3O43525 872 aa22.57■■□□□ 1.2
IGHV3-52-201ENST00000519770 FAM182BQ5T319 152 aa22.57■■□□□ 1.2
IGHV3-52-201ENST00000519770 VAMP4O75379 141 aa22.56■■□□□ 1.2
IGHV3-52-201ENST00000519770 SNRPA1P09661 255 aaKnown RBP22.56■■□□□ 1.2
IGHV3-52-201ENST00000519770 GOLGA6L2Q8N9W4 650 aaPredicted RBP22.56■■□□□ 1.2
IGHV3-52-201ENST00000519770 ITGB4P16144 1822 aa22.56■■□□□ 1.2
IGHV3-52-201ENST00000519770 RGS12O14924 1447 aa22.56■■□□□ 1.2
IGHV3-52-201ENST00000519770 TSPYL6Q8N831 410 aa22.55■■□□□ 1.2
IGHV3-52-201ENST00000519770 STK31Q9BXU1 1019 aa22.55■■□□□ 1.2
IGHV3-52-201ENST00000519770 ATG3Q9NT62 314 aa22.55■■□□□ 1.2
IGHV3-52-201ENST00000519770 PTCD1O75127 700 aaKnown RBP22.54■■□□□ 1.2
IGHV3-52-201ENST00000519770 KRT24Q2M2I5 525 aa22.54■■□□□ 1.2
IGHV3-52-201ENST00000519770 ALDH1L2Q3SY69 923 aa22.54■■□□□ 1.2
IGHV3-52-201ENST00000519770 CCDC30Q5VVM6 783 aa22.54■■□□□ 1.2
IGHV3-52-201ENST00000519770 ZNF496Q96IT1 587 aaPredicted RBP22.54■■□□□ 1.2
IGHV3-52-201ENST00000519770 RBM42Q9BTD8 480 aaKnown RBP22.54■■□□□ 1.2
IGHV3-52-201ENST00000519770 ASAP1Q9ULH1 1129 aa22.54■■□□□ 1.2
IGHV3-52-201ENST00000519770 BRWD3Q6RI45 1802 aa22.54■■□□□ 1.2
IGHV3-52-201ENST00000519770 KCNQ2O43526 872 aa22.53■■□□□ 1.2
IGHV3-52-201ENST00000519770 CANXP27824 592 aaKnown RBP22.53■■□□□ 1.2
IGHV3-52-201ENST00000519770 TEX13AQ9BXU3 409 aaPredicted RBP22.53■■□□□ 1.2
IGHV3-52-201ENST00000519770 BCL11BQ9C0K0 894 aaPredicted RBP22.53■■□□□ 1.2
IGHV3-52-201ENST00000519770 SMC4Q9NTJ3 1288 aa22.53■■□□□ 1.2
IGHV3-52-201ENST00000519770 GIGYF1O75420 1035 aaPredicted RBP22.52■■□□□ 1.2
IGHV3-52-201ENST00000519770 RARSP54136 660 aaKnown RBP22.52■■□□□ 1.2
IGHV3-52-201ENST00000519770 HDGFL1Q5TGJ6 251 aa22.52■■□□□ 1.2
IGHV3-52-201ENST00000519770 HEG1Q9ULI3 1381 aa22.51■■□□□ 1.19
IGHV3-52-201ENST00000519770 EIF2S2P20042 333 aaKnown RBP22.51■■□□□ 1.19
IGHV3-52-201ENST00000519770 VSIG10Q8N0Z9 540 aa22.51■■□□□ 1.19
IGHV3-52-201ENST00000519770 SUPT16HQ9Y5B9 1047 aaKnown RBP22.51■■□□□ 1.19
IGHV3-52-201ENST00000519770 NHSQ6T4R5 1651 aa22.49■■□□□ 1.19
IGHV3-52-201ENST00000519770 NEFLP07196 543 aa22.49■■□□□ 1.19
IGHV3-52-201ENST00000519770 SSH1Q8WYL5 1049 aa22.48■■□□□ 1.19
IGHV3-52-201ENST00000519770 PAPPAQ13219 1627 aa22.48■■□□□ 1.19
IGHV3-52-201ENST00000519770 PALLDQ8WX93 1383 aa22.48■■□□□ 1.19
IGHV3-52-201ENST00000519770 IPO8O15397 1037 aaKnown RBP22.47■■□□□ 1.19
IGHV3-52-201ENST00000519770 TRIM37O94972 964 aa22.47■■□□□ 1.19
IGHV3-52-201ENST00000519770 STARD3NLO95772 234 aa22.47■■□□□ 1.19
IGHV3-52-201ENST00000519770 HMGB2P26583 209 aaKnown RBP22.47■■□□□ 1.19
IGHV3-52-201ENST00000519770 NECTIN2Q92692 538 aa22.47■■□□□ 1.19
IGHV3-52-201ENST00000519770 BCL2L13Q9BXK5 485 aa22.47■■□□□ 1.19
IGHV3-52-201ENST00000519770 KIF16BQ96L93 1317 aa22.47■■□□□ 1.19
IGHV3-52-201ENST00000519770 TCERG1O14776 1098 aaKnown RBP22.45■■□□□ 1.18
IGHV3-52-201ENST00000519770 BCAR3O75815 825 aa22.45■■□□□ 1.18
IGHV3-52-201ENST00000519770 FRAT1Q92837 279 aaPredicted RBP22.45■■□□□ 1.18
IGHV3-52-201ENST00000519770 DBF4Q9UBU7 674 aaPredicted RBP22.45■■□□□ 1.18
IGHV3-52-201ENST00000519770 KCPQ6ZWJ8 1503 aa22.45■■□□□ 1.18
IGHV3-52-201ENST00000519770 LOC102724428A0A0B4J2F2 783 aa22.44■■□□□ 1.18
IGHV3-52-201ENST00000519770 SLC4A2P04920 1241 aa22.44■■□□□ 1.18
IGHV3-52-201ENST00000519770 MS4A1P11836 297 aa22.44■■□□□ 1.18
IGHV3-52-201ENST00000519770 ATP6V1AP38606 617 aa22.44■■□□□ 1.18
IGHV3-52-201ENST00000519770 SIK1P57059 783 aa22.44■■□□□ 1.18
IGHV3-52-201ENST00000519770 SBF2Q86WG5 1849 aa22.44■■□□□ 1.18
IGHV3-52-201ENST00000519770 UBR2Q8IWV8 1755 aa22.44■■□□□ 1.18
IGHV3-52-201ENST00000519770 RRP1P56182 461 aaKnown RBP22.43■■□□□ 1.18
IGHV3-52-201ENST00000519770 ERBB4Q15303 1308 aa22.42■■□□□ 1.18
IGHV3-52-201ENST00000519770 BRPF1P55201 1214 aaPredicted RBP22.42■■□□□ 1.18
IGHV3-52-201ENST00000519770 NPM2Q86SE8 214 aaKnown RBP22.42■■□□□ 1.18
IGHV3-52-201ENST00000519770 MRPL50Q8N5N7 158 aaKnown RBP22.42■■□□□ 1.18
IGHV3-52-201ENST00000519770 BTAF1O14981 1849 aa22.41■■□□□ 1.18
IGHV3-52-201ENST00000519770 PRAMEF22A3QJZ6 481 aa22.41■■□□□ 1.18
IGHV3-52-201ENST00000519770 SF3B2Q13435 895 aaKnown RBP22.41■■□□□ 1.18
IGHV3-52-201ENST00000519770 ZKSCAN2Q63HK3 967 aa22.41■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms