RNA–Protein interactions for RNA: ENST00000519634.5

CTNNA1-217, Transcript of catenin alpha 1, humanhuman

TSL 4

Gene CTNNA1, Length 589 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-217ENST00000519634 RAB3GAP2Q9H2M9 1393 aa9.36□□□□□ -0.91
CTNNA1-217ENST00000519634 PAPPAQ13219 1627 aa9.35□□□□□ -0.91
CTNNA1-217ENST00000519634 NBPF1Q3BBV0 1214 aa9.35□□□□□ -0.91
CTNNA1-217ENST00000519634 MICALL2Q8IY33 904 aa9.35□□□□□ -0.91
CTNNA1-217ENST00000519634 SHANK3Q9BYB0 1731 aa9.35□□□□□ -0.91
CTNNA1-217ENST00000519634 SBF2Q86WG5 1849 aa9.35□□□□□ -0.91
CTNNA1-217ENST00000519634 GOLGB1Q14789 3259 aaKnown RBP9.35□□□□□ -0.91
CTNNA1-217ENST00000519634 ABCC6O95255 1503 aa9.35□□□□□ -0.91
CTNNA1-217ENST00000519634 ERBB3P21860 1342 aa9.34□□□□□ -0.91
CTNNA1-217ENST00000519634 EVC2Q86UK5 1308 aa9.34□□□□□ -0.91
CTNNA1-217ENST00000519634 G3V3G9 751 aa9.34□□□□□ -0.91
CTNNA1-217ENST00000519634 CD2APQ9Y5K6 639 aa9.34□□□□□ -0.91
CTNNA1-217ENST00000519634 CHD4Q14839 1912 aa9.34□□□□□ -0.91
CTNNA1-217ENST00000519634 TRPM1Q7Z4N2 1603 aa9.33□□□□□ -0.92
CTNNA1-217ENST00000519634 COL18A1P39060 1754 aa9.32□□□□□ -0.92
CTNNA1-217ENST00000519634 APLP1P51693 650 aa9.32□□□□□ -0.92
CTNNA1-217ENST00000519634 DDX54Q8TDD1 881 aaKnown RBP9.32□□□□□ -0.92
CTNNA1-217ENST00000519634 ZNF526Q8TF50 670 aaPredicted RBP9.32□□□□□ -0.92
CTNNA1-217ENST00000519634 ADCY9O60503 1353 aa9.32□□□□□ -0.92
CTNNA1-217ENST00000519634 NHSQ6T4R5 1651 aa9.32□□□□□ -0.92
CTNNA1-217ENST00000519634 HMGB2P26583 209 aaKnown RBP9.31□□□□□ -0.92
CTNNA1-217ENST00000519634 KCNQ4P56696 695 aa9.31□□□□□ -0.92
CTNNA1-217ENST00000519634 ANKRD24Q8TF21 1146 aa9.31□□□□□ -0.92
CTNNA1-217ENST00000519634 SYTL4Q96C24 671 aaPredicted RBP9.31□□□□□ -0.92
CTNNA1-217ENST00000519634 NFAT5O94916 1531 aa9.31□□□□□ -0.92
CTNNA1-217ENST00000519634 PRIM1P49642 420 aaKnown RBP9.3□□□□□ -0.92
CTNNA1-217ENST00000519634 COL23A1Q86Y22 540 aaPredicted RBP9.3□□□□□ -0.92
CTNNA1-217ENST00000519634 CCNL1Q9UK58 526 aaPredicted RBP9.3□□□□□ -0.92
CTNNA1-217ENST00000519634 PIK3C2AO00443 1686 aa9.29□□□□□ -0.92
CTNNA1-217ENST00000519634 USP31Q70CQ4 1352 aa9.29□□□□□ -0.92
CTNNA1-217ENST00000519634 KTN1Q86UP2 1357 aaKnown RBP9.29□□□□□ -0.92
CTNNA1-217ENST00000519634 ANKRD36BQ8N2N9 1353 aa9.29□□□□□ -0.92
CTNNA1-217ENST00000519634 KIF3CO14782 793 aa9.29□□□□□ -0.92
CTNNA1-217ENST00000519634 MSL1Q68DK7 614 aa9.29□□□□□ -0.92
CTNNA1-217ENST00000519634 FLAD1Q8NFF5 587 aa9.29□□□□□ -0.92
CTNNA1-217ENST00000519634 AKAP12Q02952 1782 aa9.29□□□□□ -0.92
CTNNA1-217ENST00000519634 PDE4AP27815 886 aa9.28□□□□□ -0.92
CTNNA1-217ENST00000519634 SUGP2Q8IX01 1082 aaKnown RBP eCLIP9.28□□□□□ -0.92
CTNNA1-217ENST00000519634 WNK3Q9BYP7 1800 aa9.28□□□□□ -0.92
CTNNA1-217ENST00000519634 DNAJC5GQ8N7S2 189 aa9.27□□□□□ -0.93
CTNNA1-217ENST00000519634 CRISPLD2Q9H0B8 497 aa9.27□□□□□ -0.93
CTNNA1-217ENST00000519634 NSD2O96028 1365 aa9.26□□□□□ -0.93
CTNNA1-217ENST00000519634 USP47Q96K76 1375 aa9.26□□□□□ -0.93
CTNNA1-217ENST00000519634 POTEB2H3BUK9 544 aa9.26□□□□□ -0.93
CTNNA1-217ENST00000519634 TOMM70O94826 608 aa9.26□□□□□ -0.93
CTNNA1-217ENST00000519634 NME9Q86XW9 330 aa9.26□□□□□ -0.93
CTNNA1-217ENST00000519634 ZCRB1Q8TBF4 217 aaKnown RBP9.26□□□□□ -0.93
CTNNA1-217ENST00000519634 IP6K1Q92551 441 aa9.26□□□□□ -0.93
CTNNA1-217ENST00000519634 IGSF1Q8N6C5 1336 aa9.26□□□□□ -0.93
CTNNA1-217ENST00000519634 QRICH2Q9H0J4 1663 aa9.26□□□□□ -0.93
CTNNA1-217ENST00000519634 KIAA1210Q9ULL0 1709 aa9.25□□□□□ -0.93
CTNNA1-217ENST00000519634 C3orf67Q6ZVT6 689 aa9.25□□□□□ -0.93
CTNNA1-217ENST00000519634 GPHNQ9NQX3 736 aaPredicted RBP9.25□□□□□ -0.93
CTNNA1-217ENST00000519634 LTV1Q96GA3 475 aaPredicted RBP9.24□□□□□ -0.93
CTNNA1-217ENST00000519634 COL24A1Q17RW2 1714 aa9.24□□□□□ -0.93
CTNNA1-217ENST00000519634 BTAF1O14981 1849 aa9.24□□□□□ -0.93
CTNNA1-217ENST00000519634 SBNO2Q9Y2G9 1366 aa9.24□□□□□ -0.93
CTNNA1-217ENST00000519634 POTEJP0CG39 1038 aa9.23□□□□□ -0.93
CTNNA1-217ENST00000519634 HDGFL2Q7Z4V5 671 aaPredicted RBP9.23□□□□□ -0.93
CTNNA1-217ENST00000519634 WDR70Q9NW82 654 aa9.23□□□□□ -0.93
CTNNA1-217ENST00000519634 QSER1Q2KHR3 1735 aa9.22□□□□□ -0.93
CTNNA1-217ENST00000519634 MFSD10Q14728 455 aa9.22□□□□□ -0.93
CTNNA1-217ENST00000519634 COL13A1Q5TAT6 717 aaPredicted RBP9.22□□□□□ -0.93
CTNNA1-217ENST00000519634 MAMSTRQ6ZN01 415 aa9.22□□□□□ -0.93
CTNNA1-217ENST00000519634 TMC2Q8TDI7 906 aa9.22□□□□□ -0.93
CTNNA1-217ENST00000519634 KLRG1Q96E93 195 aa9.22□□□□□ -0.93
CTNNA1-217ENST00000519634 AK7Q96M32 723 aa9.22□□□□□ -0.93
CTNNA1-217ENST00000519634 LARP6Q9BRS8 491 aaKnown RBP9.22□□□□□ -0.93
CTNNA1-217ENST00000519634 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.22□□□□□ -0.93
CTNNA1-217ENST00000519634 WWC3Q9ULE0 1092 aa9.22□□□□□ -0.93
CTNNA1-217ENST00000519634 CGNL1Q0VF96 1302 aa9.22□□□□□ -0.93
CTNNA1-217ENST00000519634 PRELPP51888 382 aa9.21□□□□□ -0.94
CTNNA1-217ENST00000519634 TNS4Q8IZW8 715 aa9.21□□□□□ -0.94
CTNNA1-217ENST00000519634 JMYQ8N9B5 988 aa9.21□□□□□ -0.94
CTNNA1-217ENST00000519634 RBM46Q8TBY0 533 aaKnown RBP9.21□□□□□ -0.94
CTNNA1-217ENST00000519634 TMC1Q8TDI8 760 aa9.21□□□□□ -0.94
CTNNA1-217ENST00000519634 EDC4Q6P2E9 1401 aaKnown RBP9.21□□□□□ -0.94
CTNNA1-217ENST00000519634 NSD3Q9BZ95 1437 aa9.21□□□□□ -0.94
CTNNA1-217ENST00000519634 AMPHP49418 695 aa9.2□□□□□ -0.94
CTNNA1-217ENST00000519634 TMEM92Q6UXU6 159 aa9.2□□□□□ -0.94
CTNNA1-217ENST00000519634 SMARCC1Q92922 1105 aaPredicted RBP9.2□□□□□ -0.94
CTNNA1-217ENST00000519634 DDX27Q96GQ7 796 aaKnown RBP9.2□□□□□ -0.94
CTNNA1-217ENST00000519634 TERF2IPQ9NYB0 399 aa9.2□□□□□ -0.94
CTNNA1-217ENST00000519634 ROCK2O75116 1388 aaKnown RBP9.2□□□□□ -0.94
CTNNA1-217ENST00000519634 PALLDQ8WX93 1383 aa9.2□□□□□ -0.94
CTNNA1-217ENST00000519634 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.19□□□□□ -0.94
CTNNA1-217ENST00000519634 C2orf72A6NCS6 295 aa9.19□□□□□ -0.94
CTNNA1-217ENST00000519634 PHF14O94880 888 aa9.19□□□□□ -0.94
CTNNA1-217ENST00000519634 SSFA2P28290 1259 aa9.19□□□□□ -0.94
CTNNA1-217ENST00000519634 HOXC9P31274 260 aa9.19□□□□□ -0.94
CTNNA1-217ENST00000519634 FOXK1P85037 733 aa9.19□□□□□ -0.94
CTNNA1-217ENST00000519634 FSTL1Q12841 308 aa9.19□□□□□ -0.94
CTNNA1-217ENST00000519634 C16orf71Q8IYS4 520 aaPredicted RBP9.19□□□□□ -0.94
CTNNA1-217ENST00000519634 RAPGEF4Q8WZA2 1011 aa9.19□□□□□ -0.94
CTNNA1-217ENST00000519634 L3MBTL2Q969R5 705 aa9.19□□□□□ -0.94
CTNNA1-217ENST00000519634 SCUBE2Q9NQ36 999 aa9.19□□□□□ -0.94
CTNNA1-217ENST00000519634 MEGF6O75095 1541 aa9.18□□□□□ -0.94
CTNNA1-217ENST00000519634 TGFB2P61812 414 aa9.18□□□□□ -0.94
CTNNA1-217ENST00000519634 MAP3K19Q56UN5 1328 aa9.18□□□□□ -0.94
CTNNA1-217ENST00000519634 COG3Q96JB2 828 aa9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms