RNA–Protein interactions for RNA: ENST00000519127.1

SORBS3-206, Transcript of sorbin and SH3 domain containing 3, humanhuman

TSL 2

Gene SORBS3, Length 209 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORBS3-206ENST00000519127 TSPYL4Q9UJ04 414 aa23.32■■□□□ 1.32
SORBS3-206ENST00000519127 SCN11AQ9UI33 1791 aa23.32■■□□□ 1.32
SORBS3-206ENST00000519127 MRC1P22897 1456 aa23.31■■□□□ 1.32
SORBS3-206ENST00000519127 PRIM1P49642 420 aaKnown RBP23.31■■□□□ 1.32
SORBS3-206ENST00000519127 CHMP4AQ9BY43 222 aa23.3■■□□□ 1.32
SORBS3-206ENST00000519127 RGS12O14924 1447 aa23.3■■□□□ 1.32
SORBS3-206ENST00000519127 DUSP27Q5VZP5 1158 aa23.29■■□□□ 1.32
SORBS3-206ENST00000519127 CDCA7LQ96GN5 454 aa23.29■■□□□ 1.32
SORBS3-206ENST00000519127 MBIPQ9NS73 344 aa23.29■■□□□ 1.32
SORBS3-206ENST00000519127 CT47B1P0C2W7 299 aaPredicted RBP23.28■■□□□ 1.32
SORBS3-206ENST00000519127 TTC5Q8N0Z6 440 aa23.28■■□□□ 1.32
SORBS3-206ENST00000519127 PIGBQ92521 554 aa23.28■■□□□ 1.32
SORBS3-206ENST00000519127 SMARCC1Q92922 1105 aaPredicted RBP23.28■■□□□ 1.32
SORBS3-206ENST00000519127 SYTL4Q96C24 671 aaPredicted RBP23.28■■□□□ 1.32
SORBS3-206ENST00000519127 SPINK5Q9NQ38 1064 aaPredicted RBP23.28■■□□□ 1.32
SORBS3-206ENST00000519127 SOS1Q07889 1333 aaPredicted RBP23.28■■□□□ 1.32
SORBS3-206ENST00000519127 ZNF790Q6PG37 636 aa23.27■■□□□ 1.32
SORBS3-206ENST00000519127 BCL11BQ9C0K0 894 aaPredicted RBP23.27■■□□□ 1.32
SORBS3-206ENST00000519127 ACSBG1Q96GR2 724 aa23.26■■□□□ 1.31
SORBS3-206ENST00000519127 FANCIQ9NVI1 1328 aa23.26■■□□□ 1.31
SORBS3-206ENST00000519127 HMGB2P26583 209 aaKnown RBP23.25■■□□□ 1.31
SORBS3-206ENST00000519127 CENPBP07199 599 aaPredicted RBP23.24■■□□□ 1.31
SORBS3-206ENST00000519127 MIS18AQ9NYP9 233 aa23.24■■□□□ 1.31
SORBS3-206ENST00000519127 TSR2Q969E8 191 aaKnown RBP23.23■■□□□ 1.31
SORBS3-206ENST00000519127 ZNF428Q96B54 188 aa23.23■■□□□ 1.31
SORBS3-206ENST00000519127 FMNL2Q96PY5 1086 aa23.23■■□□□ 1.31
SORBS3-206ENST00000519127 HOXB7P09629 217 aa23.22■■□□□ 1.31
SORBS3-206ENST00000519127 EIF4A1P60842 406 aaKnown RBP23.22■■□□□ 1.31
SORBS3-206ENST00000519127 FAM182BQ5T319 152 aa23.22■■□□□ 1.31
SORBS3-206ENST00000519127 ATG3Q9NT62 314 aa23.22■■□□□ 1.31
SORBS3-206ENST00000519127 BRWD3Q6RI45 1802 aa23.22■■□□□ 1.31
SORBS3-206ENST00000519127 KCNQ2O43526 872 aa23.21■■□□□ 1.31
SORBS3-206ENST00000519127 VSIG10Q8N0Z9 540 aa23.21■■□□□ 1.31
SORBS3-206ENST00000519127 TEX13AQ9BXU3 409 aaPredicted RBP23.21■■□□□ 1.31
SORBS3-206ENST00000519127 VIRMAQ69YN4 1812 aaKnown RBP23.2■■□□□ 1.3
SORBS3-206ENST00000519127 SIPA1L3O60292 1781 aaPredicted RBP23.2■■□□□ 1.3
SORBS3-206ENST00000519127 SLC39A6Q13433 755 aa23.2■■□□□ 1.3
SORBS3-206ENST00000519127 EXOSC9Q06265 439 aaKnown RBP23.19■■□□□ 1.3
SORBS3-206ENST00000519127 ASAP1Q9ULH1 1129 aa23.19■■□□□ 1.3
SORBS3-206ENST00000519127 TOGARAM1Q9Y4F4 1720 aa23.19■■□□□ 1.3
SORBS3-206ENST00000519127 HEG1Q9ULI3 1381 aa23.17■■□□□ 1.3
SORBS3-206ENST00000519127 DOT1LQ8TEK3 1739 aa23.17■■□□□ 1.3
SORBS3-206ENST00000519127 KAT6BQ8WYB5 2073 aa23.17■■□□□ 1.3
SORBS3-206ENST00000519127 SNRPA1P09661 255 aaKnown RBP23.17■■□□□ 1.3
SORBS3-206ENST00000519127 ITGB4P16144 1822 aa23.17■■□□□ 1.3
SORBS3-206ENST00000519127 KCNQ3O43525 872 aa23.16■■□□□ 1.3
SORBS3-206ENST00000519127 TWISTNBQ3B726 338 aaPredicted RBP23.16■■□□□ 1.3
SORBS3-206ENST00000519127 ZNF496Q96IT1 587 aaPredicted RBP23.16■■□□□ 1.3
SORBS3-206ENST00000519127 GIGYF1O75420 1035 aaPredicted RBP23.15■■□□□ 1.3
SORBS3-206ENST00000519127 TRIM37O94972 964 aa23.15■■□□□ 1.3
SORBS3-206ENST00000519127 CCDC125Q86Z20 511 aa23.15■■□□□ 1.3
SORBS3-206ENST00000519127 C8orf58Q8NAV2 365 aa23.15■■□□□ 1.3
SORBS3-206ENST00000519127 NHSQ6T4R5 1651 aa23.15■■□□□ 1.3
SORBS3-206ENST00000519127 VAMP4O75379 141 aa23.14■■□□□ 1.29
SORBS3-206ENST00000519127 KDM3BQ7LBC6 1761 aa23.14■■□□□ 1.29
SORBS3-206ENST00000519127 PLSCR1O15162 318 aa23.13■■□□□ 1.29
SORBS3-206ENST00000519127 PTCD1O75127 700 aaKnown RBP23.12■■□□□ 1.29
SORBS3-206ENST00000519127 RBM42Q9BTD8 480 aaKnown RBP23.12■■□□□ 1.29
SORBS3-206ENST00000519127 PALLDQ8WX93 1383 aa23.12■■□□□ 1.29
SORBS3-206ENST00000519127 SBF2Q86WG5 1849 aa23.11■■□□□ 1.29
SORBS3-206ENST00000519127 LOC102724428A0A0B4J2F2 783 aa23.11■■□□□ 1.29
SORBS3-206ENST00000519127 SIK1P57059 783 aa23.11■■□□□ 1.29
SORBS3-206ENST00000519127 ALDH1L2Q3SY69 923 aa23.11■■□□□ 1.29
SORBS3-206ENST00000519127 CCDC30Q5VVM6 783 aa23.11■■□□□ 1.29
SORBS3-206ENST00000519127 STARD3NLO95772 234 aa23.1■■□□□ 1.29
SORBS3-206ENST00000519127 SF3B2Q13435 895 aaKnown RBP23.1■■□□□ 1.29
SORBS3-206ENST00000519127 TSPYL6Q8N831 410 aa23.1■■□□□ 1.29
SORBS3-206ENST00000519127 PAPPAQ13219 1627 aa23.09■■□□□ 1.29
SORBS3-206ENST00000519127 ELL2O00472 640 aaPredicted RBP23.09■■□□□ 1.29
SORBS3-206ENST00000519127 SLC27A3Q5K4L6 730 aa23.09■■□□□ 1.29
SORBS3-206ENST00000519127 APBA3O96018 575 aa23.08■■□□□ 1.29
SORBS3-206ENST00000519127 PTF1AQ7RTS3 328 aa23.08■■□□□ 1.29
SORBS3-206ENST00000519127 RCAN3Q9UKA8 241 aa23.08■■□□□ 1.29
SORBS3-206ENST00000519127 KCPQ6ZWJ8 1503 aa23.08■■□□□ 1.28
SORBS3-206ENST00000519127 ERBB4Q15303 1308 aa23.08■■□□□ 1.28
SORBS3-206ENST00000519127 ATP6V1AP38606 617 aa23.07■■□□□ 1.28
SORBS3-206ENST00000519127 KRT24Q2M2I5 525 aa23.07■■□□□ 1.28
SORBS3-206ENST00000519127 HDGFL1Q5TGJ6 251 aa23.07■■□□□ 1.28
SORBS3-206ENST00000519127 BRPF1P55201 1214 aaPredicted RBP23.06■■□□□ 1.28
SORBS3-206ENST00000519127 STK31Q9BXU1 1019 aa23.06■■□□□ 1.28
SORBS3-206ENST00000519127 UBR2Q8IWV8 1755 aa23.05■■□□□ 1.28
SORBS3-206ENST00000519127 RARSP54136 660 aaKnown RBP23.05■■□□□ 1.28
SORBS3-206ENST00000519127 BTAF1O14981 1849 aa23.04■■□□□ 1.28
SORBS3-206ENST00000519127 EIF2S2P20042 333 aaKnown RBP23.04■■□□□ 1.28
SORBS3-206ENST00000519127 DBF4Q9UBU7 674 aaPredicted RBP23.04■■□□□ 1.28
SORBS3-206ENST00000519127 USP16Q9Y5T5 823 aa23.04■■□□□ 1.28
SORBS3-206ENST00000519127 SLC4A9Q96Q91 983 aa23.03■■□□□ 1.28
SORBS3-206ENST00000519127 CCNL1Q9UK58 526 aaPredicted RBP23.03■■□□□ 1.28
SORBS3-206ENST00000519127 BAG6P46379 1132 aa23.02■■□□□ 1.28
SORBS3-206ENST00000519127 RC3H1Q5TC82 1133 aaKnown RBP23.02■■□□□ 1.28
SORBS3-206ENST00000519127 DNAJC10Q8IXB1 793 aa23.02■■□□□ 1.28
SORBS3-206ENST00000519127 ZNF831Q5JPB2 1677 aa23.02■■□□□ 1.28
SORBS3-206ENST00000519127 CYP19A1P11511 503 aaPredicted RBP23.01■■□□□ 1.27
SORBS3-206ENST00000519127 DDX21Q9NR30 783 aaKnown RBP eCLIP23.01■■□□□ 1.27
SORBS3-206ENST00000519127 HYPKQ9NX55 129 aa23.01■■□□□ 1.27
SORBS3-206ENST00000519127 GOLGA6L2Q8N9W4 650 aaPredicted RBP23■■□□□ 1.27
SORBS3-206ENST00000519127 SSH1Q8WYL5 1049 aa23■■□□□ 1.27
SORBS3-206ENST00000519127 PRAMEF22A3QJZ6 481 aa22.99■■□□□ 1.27
SORBS3-206ENST00000519127 IPO8O15397 1037 aaKnown RBP22.99■■□□□ 1.27
SORBS3-206ENST00000519127 SLC4A2P04920 1241 aa22.99■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms