RNA–Protein interactions for RNA: ENST00000518962.1

LINC00293-202, long intergenic non-protein coding RNA 293, humanhuman

TSL 3

Gene LINC00293, Length 706 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00293-202ENST00000518962 C6orf118Q5T5N4 469 aa8.37□□□□□ -1.07
LINC00293-202ENST00000518962 CNKSR1Q969H4 720 aa8.37□□□□□ -1.07
LINC00293-202ENST00000518962 INSM2Q96T92 566 aaPredicted RBP8.37□□□□□ -1.07
LINC00293-202ENST00000518962 BMP2P12643 396 aa8.36□□□□□ -1.07
LINC00293-202ENST00000518962 Q6ZNB5 142 aa8.36□□□□□ -1.07
LINC00293-202ENST00000518962 TSEN2Q8NCE0 465 aaKnown RBP8.36□□□□□ -1.07
LINC00293-202ENST00000518962 PURBQ96QR8 312 aaKnown RBP8.36□□□□□ -1.07
LINC00293-202ENST00000518962 ESYT1Q9BSJ8 1104 aa8.36□□□□□ -1.07
LINC00293-202ENST00000518962 SERTAD1Q9UHV2 236 aa8.36□□□□□ -1.07
LINC00293-202ENST00000518962 USTQ9Y2C2 406 aa8.36□□□□□ -1.07
LINC00293-202ENST00000518962 TMEM88BA6NKF7 163 aa8.35□□□□□ -1.07
LINC00293-202ENST00000518962 M0R2N6 131 aa8.35□□□□□ -1.07
LINC00293-202ENST00000518962 SCARF1Q14162 830 aa8.35□□□□□ -1.07
LINC00293-202ENST00000518962 TLR1Q15399 786 aa8.35□□□□□ -1.07
LINC00293-202ENST00000518962 XAGE2Q96GT9 111 aa8.35□□□□□ -1.07
LINC00293-202ENST00000518962 ATP13A2Q9NQ11 1180 aa8.35□□□□□ -1.07
LINC00293-202ENST00000518962 DACH1Q9UI36 760 aa8.35□□□□□ -1.07
LINC00293-202ENST00000518962 HRH3Q9Y5N1 445 aa8.35□□□□□ -1.07
LINC00293-202ENST00000518962 LCE2BO14633 110 aa8.34□□□□□ -1.07
LINC00293-202ENST00000518962 BACH1O14867 736 aa8.34□□□□□ -1.07
LINC00293-202ENST00000518962 CTSOP43234 321 aaPredicted RBP8.34□□□□□ -1.07
LINC00293-202ENST00000518962 EPHA4P54764 986 aa8.34□□□□□ -1.07
LINC00293-202ENST00000518962 FAM69CQ0P6D2 419 aa8.34□□□□□ -1.07
LINC00293-202ENST00000518962 NLRP3Q96P20 1036 aa8.34□□□□□ -1.07
LINC00293-202ENST00000518962 SLC4A9Q96Q91 983 aa8.34□□□□□ -1.07
LINC00293-202ENST00000518962 POLMQ9NP87 494 aaPredicted RBP8.34□□□□□ -1.07
LINC00293-202ENST00000518962 CARNS1A5YM72 827 aa8.33□□□□□ -1.08
LINC00293-202ENST00000518962 SWI5Q1ZZU3 235 aa8.33□□□□□ -1.08
LINC00293-202ENST00000518962 FOXD4L5Q5VV16 416 aaPredicted RBP8.33□□□□□ -1.08
LINC00293-202ENST00000518962 HOMEZQ8IX15 550 aa8.33□□□□□ -1.08
LINC00293-202ENST00000518962 ZFP42Q96MM3 310 aa8.33□□□□□ -1.08
LINC00293-202ENST00000518962 FHDC1Q9C0D6 1143 aaPredicted RBP8.33□□□□□ -1.08
LINC00293-202ENST00000518962 GPC1P35052 558 aa8.32□□□□□ -1.08
LINC00293-202ENST00000518962 SMTNP53814 917 aa8.32□□□□□ -1.08
LINC00293-202ENST00000518962 A6NJY4 79 aa8.31□□□□□ -1.08
LINC00293-202ENST00000518962 LGR5O75473 907 aa8.31□□□□□ -1.08
LINC00293-202ENST00000518962 CENPCQ03188 943 aa8.31□□□□□ -1.08
LINC00293-202ENST00000518962 MTFR1Q15390 333 aa8.31□□□□□ -1.08
LINC00293-202ENST00000518962 TNS4Q8IZW8 715 aa8.31□□□□□ -1.08
LINC00293-202ENST00000518962 RNF217Q8TC41 542 aa8.31□□□□□ -1.08
LINC00293-202ENST00000518962 TTLL8A6PVC2 850 aa8.3□□□□□ -1.08
LINC00293-202ENST00000518962 RNF144AP50876 292 aaPredicted RBP8.3□□□□□ -1.08
LINC00293-202ENST00000518962 CLP1Q92989 425 aaKnown RBP8.3□□□□□ -1.08
LINC00293-202ENST00000518962 HINFPQ9BQA5 517 aa8.3□□□□□ -1.08
LINC00293-202ENST00000518962 TSPAN10Q9H1Z9 355 aaPredicted RBP8.3□□□□□ -1.08
LINC00293-202ENST00000518962 SCHIP1Q9P0W5 487 aaPredicted RBP8.3□□□□□ -1.08
LINC00293-202ENST00000518962 SLAIN2Q9P270 581 aa8.3□□□□□ -1.08
LINC00293-202ENST00000518962 USP3Q9Y6I4 520 aa8.3□□□□□ -1.08
LINC00293-202ENST00000518962 SOS2Q07890 1332 aaPredicted RBP8.29□□□□□ -1.08
LINC00293-202ENST00000518962 FOXK2Q01167 660 aa8.29□□□□□ -1.08
LINC00293-202ENST00000518962 SLC27A3Q5K4L6 730 aa8.29□□□□□ -1.08
LINC00293-202ENST00000518962 SLC9A9Q8IVB4 645 aa8.29□□□□□ -1.08
LINC00293-202ENST00000518962 NBPF15Q8N660 670 aa8.29□□□□□ -1.08
LINC00293-202ENST00000518962 ZSCAN10Q96SZ4 725 aaPredicted RBP8.29□□□□□ -1.08
LINC00293-202ENST00000518962 GRIP2Q9C0E4 1043 aa8.29□□□□□ -1.08
LINC00293-202ENST00000518962 IQSEC3Q9UPP2 1182 aaPredicted RBP8.29□□□□□ -1.08
LINC00293-202ENST00000518962 PRMT3O60678 531 aa8.28□□□□□ -1.08
LINC00293-202ENST00000518962 TBCELQ5QJ74 424 aa8.28□□□□□ -1.08
LINC00293-202ENST00000518962 PDE4CQ08493 712 aa8.27□□□□□ -1.09
LINC00293-202ENST00000518962 OCLNQ16625 522 aa8.27□□□□□ -1.09
LINC00293-202ENST00000518962 PPARGC1BQ86YN6 1023 aaKnown RBP8.27□□□□□ -1.09
LINC00293-202ENST00000518962 ZNF295-AS1Q8N0V1 137 aa8.27□□□□□ -1.09
LINC00293-202ENST00000518962 GMPR2Q9P2T1 348 aaKnown RBP8.27□□□□□ -1.09
LINC00293-202ENST00000518962 DNMT3LQ9UJW3 386 aa8.27□□□□□ -1.09
LINC00293-202ENST00000518962 CDK2AP1O14519 115 aa8.26□□□□□ -1.09
LINC00293-202ENST00000518962 C21orf2O43822 256 aa8.26□□□□□ -1.09
LINC00293-202ENST00000518962 ATP2B4P23634 1241 aa8.26□□□□□ -1.09
LINC00293-202ENST00000518962 WEE1P30291 646 aa8.26□□□□□ -1.09
LINC00293-202ENST00000518962 TMEM214Q6NUQ4 689 aaKnown RBP8.26□□□□□ -1.09
LINC00293-202ENST00000518962 PRIMPOLQ96LW4 560 aa8.26□□□□□ -1.09
LINC00293-202ENST00000518962 FIGNL2A6NMB9 653 aa8.25□□□□□ -1.09
LINC00293-202ENST00000518962 IGFBP4P22692 258 aa8.25□□□□□ -1.09
LINC00293-202ENST00000518962 GTF2E1P29083 439 aaPredicted RBP8.25□□□□□ -1.09
LINC00293-202ENST00000518962 GNASQ5JWF2 1037 aa8.25□□□□□ -1.09
LINC00293-202ENST00000518962 LYSMD3Q7Z3D4 306 aa8.25□□□□□ -1.09
LINC00293-202ENST00000518962 PRICKLE2Q7Z3G6 844 aa8.25□□□□□ -1.09
LINC00293-202ENST00000518962 RHBDD1Q8TEB9 315 aa8.25□□□□□ -1.09
LINC00293-202ENST00000518962 SCG3Q8WXD2 468 aaKnown RBP8.25□□□□□ -1.09
LINC00293-202ENST00000518962 TRIM47Q96LD4 638 aa8.25□□□□□ -1.09
LINC00293-202ENST00000518962 TRAIPQ9BWF2 469 aa8.25□□□□□ -1.09
LINC00293-202ENST00000518962 SENP2Q9HC62 589 aa8.25□□□□□ -1.09
LINC00293-202ENST00000518962 SPATA31C2B4DYI2 1134 aa8.24□□□□□ -1.09
LINC00293-202ENST00000518962 MAN1A2O60476 641 aa8.24□□□□□ -1.09
LINC00293-202ENST00000518962 PDIA4P13667 645 aaKnown RBP8.24□□□□□ -1.09
LINC00293-202ENST00000518962 PSMA6P60900 246 aaKnown RBP8.24□□□□□ -1.09
LINC00293-202ENST00000518962 C4orf17Q53FE4 359 aa8.24□□□□□ -1.09
LINC00293-202ENST00000518962 GAS2L2Q8NHY3 880 aa8.24□□□□□ -1.09
LINC00293-202ENST00000518962 KIFC2Q96AC6 838 aa8.24□□□□□ -1.09
LINC00293-202ENST00000518962 CXXC1Q9P0U4 656 aaPredicted RBP8.24□□□□□ -1.09
LINC00293-202ENST00000518962 SOBPA7XYQ1 873 aa8.23□□□□□ -1.09
LINC00293-202ENST00000518962 PPP1R12BO60237 982 aaPredicted RBP8.23□□□□□ -1.09
LINC00293-202ENST00000518962 FKBP5Q13451 457 aaPredicted RBP8.23□□□□□ -1.09
LINC00293-202ENST00000518962 NBPF10Q6P3W6 841 aaKnown RBP8.23□□□□□ -1.09
LINC00293-202ENST00000518962 TAS1R3Q7RTX0 852 aa8.23□□□□□ -1.09
LINC00293-202ENST00000518962 ZDHHC1Q8WTX9 485 aa8.23□□□□□ -1.09
LINC00293-202ENST00000518962 NIFKQ9BYG3 293 aaKnown RBP8.23□□□□□ -1.09
LINC00293-202ENST00000518962 CABP1Q9NZU7 370 aa8.23□□□□□ -1.09
LINC00293-202ENST00000518962 ATAD2Q6PL18 1390 aa8.22□□□□□ -1.09
LINC00293-202ENST00000518962 RHOQP17081 205 aa8.22□□□□□ -1.09
LINC00293-202ENST00000518962 SSFA2P28290 1259 aa8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms