RNA–Protein interactions for RNA: ENST00000518699.3

NKX6-3-201, Transcript of NK6 homeobox 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene NKX6-3, Length 1,352 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-3-201ENST00000518699 UBR2Q8IWV8 1755 aa30.09■■■□□ 2.41
NKX6-3-201ENST00000518699 DCTN1Q14203 1278 aa30.09■■■□□ 2.41
NKX6-3-201ENST00000518699 PIGBQ92521 554 aa30.09■■■□□ 2.41
NKX6-3-201ENST00000518699 TEFQ10587 303 aa30.08■■■□□ 2.41
NKX6-3-201ENST00000518699 CCDC27Q2M243 656 aa30.08■■■□□ 2.41
NKX6-3-201ENST00000518699 NGEFQ8N5V2 710 aa30.08■■■□□ 2.41
NKX6-3-201ENST00000518699 KDM3BQ7LBC6 1761 aa30.08■■■□□ 2.41
NKX6-3-201ENST00000518699 NFATC2IPQ8NCF5 419 aa30.06■■■□□ 2.4
NKX6-3-201ENST00000518699 RREB1Q92766 1687 aa30.05■■■□□ 2.4
NKX6-3-201ENST00000518699 SF3B2Q13435 895 aaKnown RBP30.05■■■□□ 2.4
NKX6-3-201ENST00000518699 ZNF831Q5JPB2 1677 aa30.05■■■□□ 2.4
NKX6-3-201ENST00000518699 THUMPD2Q9BTF0 503 aaKnown RBP30.04■■■□□ 2.4
NKX6-3-201ENST00000518699 CICQ96RK0 1608 aaPredicted RBP30.03■■■□□ 2.4
NKX6-3-201ENST00000518699 APBA3O96018 575 aa30.03■■■□□ 2.4
NKX6-3-201ENST00000518699 PLSCR1O15162 318 aa30.02■■■□□ 2.4
NKX6-3-201ENST00000518699 PALLDQ8WX93 1383 aa30.01■■■□□ 2.39
NKX6-3-201ENST00000518699 BAG6P46379 1132 aa30.01■■■□□ 2.39
NKX6-3-201ENST00000518699 KCPQ6ZWJ8 1503 aa30■■■□□ 2.39
NKX6-3-201ENST00000518699 SMARCC1Q92922 1105 aaPredicted RBP30■■■□□ 2.39
NKX6-3-201ENST00000518699 ATG3Q9NT62 314 aa30■■■□□ 2.39
NKX6-3-201ENST00000518699 WWC1Q8IX03 1113 aa29.99■■■□□ 2.39
NKX6-3-201ENST00000518699 ASAP1Q9ULH1 1129 aa29.99■■■□□ 2.39
NKX6-3-201ENST00000518699 SENP3-EIF4A1A0A087X0R7 540 aa29.98■■■□□ 2.39
NKX6-3-201ENST00000518699 TAF7Q15545 349 aaPredicted RBP29.98■■■□□ 2.39
NKX6-3-201ENST00000518699 NUP188Q5SRE5 1749 aa29.97■■■□□ 2.39
NKX6-3-201ENST00000518699 CALD1Q05682 793 aaKnown RBP29.97■■■□□ 2.39
NKX6-3-201ENST00000518699 SOCS7O14512 581 aa29.96■■■□□ 2.39
NKX6-3-201ENST00000518699 BTBD11A6QL63 1104 aa29.95■■■□□ 2.39
NKX6-3-201ENST00000518699 BABAM1Q9NWV8 329 aa29.95■■■□□ 2.39
NKX6-3-201ENST00000518699 TAF1LQ8IZX4 1826 aa29.95■■■□□ 2.38
NKX6-3-201ENST00000518699 ZNF521Q96K83 1311 aa29.95■■■□□ 2.38
NKX6-3-201ENST00000518699 TJP1Q07157 1748 aa29.94■■■□□ 2.38
NKX6-3-201ENST00000518699 DEFB132Q7Z7B7 95 aa29.94■■■□□ 2.38
NKX6-3-201ENST00000518699 CAMKK2Q96RR4 588 aa29.94■■■□□ 2.38
NKX6-3-201ENST00000518699 C5P01031 1676 aa29.93■■■□□ 2.38
NKX6-3-201ENST00000518699 COL5A3P25940 1745 aaPredicted RBP29.92■■■□□ 2.38
NKX6-3-201ENST00000518699 EN1Q05925 392 aaPredicted RBP29.92■■■□□ 2.38
NKX6-3-201ENST00000518699 SLC39A6Q13433 755 aa29.92■■■□□ 2.38
NKX6-3-201ENST00000518699 ZNF790Q6PG37 636 aa29.92■■■□□ 2.38
NKX6-3-201ENST00000518699 SALL2Q9Y467 1007 aaPredicted RBP29.92■■■□□ 2.38
NKX6-3-201ENST00000518699 IL16Q14005 1332 aa29.92■■■□□ 2.38
NKX6-3-201ENST00000518699 WDR63Q8IWG1 891 aa29.9■■■□□ 2.38
NKX6-3-201ENST00000518699 IFT57Q9NWB7 429 aa29.9■■■□□ 2.38
NKX6-3-201ENST00000518699 TTC5Q8N0Z6 440 aa29.9■■■□□ 2.38
NKX6-3-201ENST00000518699 CFAP44Q96MT7 982 aa29.9■■■□□ 2.38
NKX6-3-201ENST00000518699 LAMB4A4D0S4 1761 aa29.89■■■□□ 2.37
NKX6-3-201ENST00000518699 ZNF853P0CG23 659 aa29.89■■■□□ 2.37
NKX6-3-201ENST00000518699 EZH2Q15910 746 aaKnown RBP29.89■■■□□ 2.37
NKX6-3-201ENST00000518699 TXNRD1Q16881 649 aa29.89■■■□□ 2.37
NKX6-3-201ENST00000518699 SLC27A3Q5K4L6 730 aa29.89■■■□□ 2.37
NKX6-3-201ENST00000518699 LOC102724428A0A0B4J2F2 783 aa29.88■■■□□ 2.37
NKX6-3-201ENST00000518699 CHL1O00533 1208 aa29.88■■■□□ 2.37
NKX6-3-201ENST00000518699 SIK1P57059 783 aa29.88■■■□□ 2.37
NKX6-3-201ENST00000518699 TSPYL4Q9UJ04 414 aa29.88■■■□□ 2.37
NKX6-3-201ENST00000518699 GNAI1P63096 354 aa29.87■■■□□ 2.37
NKX6-3-201ENST00000518699 PROM2Q8N271 834 aa29.87■■■□□ 2.37
NKX6-3-201ENST00000518699 KCNQ3O43525 872 aa29.86■■■□□ 2.37
NKX6-3-201ENST00000518699 HNRNPUQ00839 825 aaKnown RBP eCLIP29.86■■■□□ 2.37
NKX6-3-201ENST00000518699 MIS18AQ9NYP9 233 aa29.86■■■□□ 2.37
NKX6-3-201ENST00000518699 CCNL1Q9UK58 526 aaPredicted RBP29.86■■■□□ 2.37
NKX6-3-201ENST00000518699 ZNF496Q96IT1 587 aaPredicted RBP29.85■■■□□ 2.37
NKX6-3-201ENST00000518699 HEG1Q9ULI3 1381 aa29.84■■■□□ 2.37
NKX6-3-201ENST00000518699 PTCD1O75127 700 aaKnown RBP29.84■■■□□ 2.37
NKX6-3-201ENST00000518699 SLC4A9Q96Q91 983 aa29.84■■■□□ 2.37
NKX6-3-201ENST00000518699 RBM42Q9BTD8 480 aaKnown RBP29.84■■■□□ 2.37
NKX6-3-201ENST00000518699 C4BP0C0L5 1744 aa29.83■■■□□ 2.37
NKX6-3-201ENST00000518699 VSIG10Q8N0Z9 540 aa29.83■■■□□ 2.37
NKX6-3-201ENST00000518699 FMNL2Q96PY5 1086 aa29.83■■■□□ 2.37
NKX6-3-201ENST00000518699 LRRC4BQ9NT99 713 aa29.83■■■□□ 2.37
NKX6-3-201ENST00000518699 MBIPQ9NS73 344 aa29.82■■■□□ 2.36
NKX6-3-201ENST00000518699 LAS1LQ9Y4W2 734 aaKnown RBP29.82■■■□□ 2.36
NKX6-3-201ENST00000518699 EIF4A1P60842 406 aaKnown RBP29.8■■■□□ 2.36
NKX6-3-201ENST00000518699 ATP6V1AP38606 617 aa29.79■■■□□ 2.36
NKX6-3-201ENST00000518699 ZBED9Q6R2W3 1325 aa29.78■■■□□ 2.36
NKX6-3-201ENST00000518699 HMGB2P26583 209 aaKnown RBP29.78■■■□□ 2.36
NKX6-3-201ENST00000518699 ITPK1Q13572 414 aa29.78■■■□□ 2.36
NKX6-3-201ENST00000518699 GOLGA2Q08379 1002 aa29.77■■■□□ 2.36
NKX6-3-201ENST00000518699 QSER1Q2KHR3 1735 aa29.77■■■□□ 2.36
NKX6-3-201ENST00000518699 TUBGCP6Q96RT7 1819 aa29.77■■■□□ 2.36
NKX6-3-201ENST00000518699 KCNQ4P56696 695 aa29.77■■■□□ 2.36
NKX6-3-201ENST00000518699 FANCIQ9NVI1 1328 aa29.76■■■□□ 2.35
NKX6-3-201ENST00000518699 SPINK5Q9NQ38 1064 aaPredicted RBP29.76■■■□□ 2.35
NKX6-3-201ENST00000518699 MYH14Q7Z406 1995 aaKnown RBP29.75■■■□□ 2.35
NKX6-3-201ENST00000518699 MYH16Q9H6N6 1097 aa29.75■■■□□ 2.35
NKX6-3-201ENST00000518699 UBR3Q6ZT12 1888 aa29.74■■■□□ 2.35
NKX6-3-201ENST00000518699 SNRPA1P09661 255 aaKnown RBP29.74■■■□□ 2.35
NKX6-3-201ENST00000518699 DNAJC10Q8IXB1 793 aa29.74■■■□□ 2.35
NKX6-3-201ENST00000518699 LINC00116Q8NCU8 138 aa29.74■■■□□ 2.35
NKX6-3-201ENST00000518699 TSR2Q969E8 191 aaKnown RBP29.74■■■□□ 2.35
NKX6-3-201ENST00000518699 E9PSI1 815 aa29.73■■■□□ 2.35
NKX6-3-201ENST00000518699 TEX13AQ9BXU3 409 aaPredicted RBP29.73■■■□□ 2.35
NKX6-3-201ENST00000518699 CNTNAP4Q9C0A0 1308 aa29.72■■■□□ 2.35
NKX6-3-201ENST00000518699 GIGYF1O75420 1035 aaPredicted RBP29.72■■■□□ 2.35
NKX6-3-201ENST00000518699 SLFN5Q08AF3 891 aa29.7■■■□□ 2.35
NKX6-3-201ENST00000518699 HOXB7P09629 217 aa29.69■■■□□ 2.34
NKX6-3-201ENST00000518699 ANO8Q9HCE9 1232 aaPredicted RBP29.69■■■□□ 2.34
NKX6-3-201ENST00000518699 PRAMEF22A3QJZ6 481 aa29.68■■■□□ 2.34
NKX6-3-201ENST00000518699 CYP19A1P11511 503 aaPredicted RBP29.68■■■□□ 2.34
NKX6-3-201ENST00000518699 KRT24Q2M2I5 525 aa29.68■■■□□ 2.34
NKX6-3-201ENST00000518699 AKT1S1Q96B36 256 aa29.68■■■□□ 2.34
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms