RNA–Protein interactions for RNA: ENST00000518371.2

MRPS28-203, Transcript of mitochondrial ribosomal protein S28, humanhuman

TSL 3

Gene MRPS28, Length 783 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28-203ENST00000518371 FECHP22830 423 aa8.68□□□□□ -1.02
MRPS28-203ENST00000518371 HIRIP3Q9BW71 556 aaPredicted RBP8.68□□□□□ -1.02
MRPS28-203ENST00000518371 DACH1Q9UI36 760 aa8.68□□□□□ -1.02
MRPS28-203ENST00000518371 PCDHB3Q9Y5E6 796 aa8.68□□□□□ -1.02
MRPS28-203ENST00000518371 PRAG1Q86YV5 1406 aa8.68□□□□□ -1.02
MRPS28-203ENST00000518371 SETD1AO15047 1707 aaKnown RBP8.67□□□□□ -1.02
MRPS28-203ENST00000518371 GPR37O15354 613 aa8.67□□□□□ -1.02
MRPS28-203ENST00000518371 DNAJB2P25686 324 aa8.67□□□□□ -1.02
MRPS28-203ENST00000518371 MST1RQ04912 1400 aa8.67□□□□□ -1.02
MRPS28-203ENST00000518371 SMYD5Q6GMV2 418 aa8.67□□□□□ -1.02
MRPS28-203ENST00000518371 ASXL1Q8IXJ9 1541 aa8.67□□□□□ -1.02
MRPS28-203ENST00000518371 VSIG10Q8N0Z9 540 aa8.67□□□□□ -1.02
MRPS28-203ENST00000518371 RBM46Q8TBY0 533 aaKnown RBP8.67□□□□□ -1.02
MRPS28-203ENST00000518371 TMEM134Q9H6X4 195 aa8.67□□□□□ -1.02
MRPS28-203ENST00000518371 SIPA1L2Q9P2F8 1722 aaPredicted RBP8.67□□□□□ -1.02
MRPS28-203ENST00000518371 C1orf167Q5SNV9 1468 aa8.66□□□□□ -1.02
MRPS28-203ENST00000518371 C11orf95C9JLR9 678 aaPredicted RBP8.66□□□□□ -1.02
MRPS28-203ENST00000518371 NBPF8Q3BBV2 869 aa8.66□□□□□ -1.02
MRPS28-203ENST00000518371 BLOC1S3Q6QNY0 202 aa8.66□□□□□ -1.02
MRPS28-203ENST00000518371 CRIPAKQ8N1N5 446 aa8.66□□□□□ -1.02
MRPS28-203ENST00000518371 DDX17Q92841 729 aaKnown RBP8.66□□□□□ -1.02
MRPS28-203ENST00000518371 LRRC59Q96AG4 307 aaKnown RBP8.66□□□□□ -1.02
MRPS28-203ENST00000518371 PRR14Q9BWN1 585 aa8.66□□□□□ -1.02
MRPS28-203ENST00000518371 LAMC1P11047 1609 aa8.65□□□□□ -1.02
MRPS28-203ENST00000518371 DISP3Q9P2K9 1392 aa8.65□□□□□ -1.02
MRPS28-203ENST00000518371 WASLO00401 505 aaPredicted RBP8.65□□□□□ -1.02
MRPS28-203ENST00000518371 HIC1Q14526 733 aa8.65□□□□□ -1.02
MRPS28-203ENST00000518371 GMPR2Q9P2T1 348 aaKnown RBP8.65□□□□□ -1.02
MRPS28-203ENST00000518371 ADGRB1O14514 1584 aa8.65□□□□□ -1.03
MRPS28-203ENST00000518371 ROCK2O75116 1388 aaKnown RBP8.64□□□□□ -1.03
MRPS28-203ENST00000518371 CLSPNQ9HAW4 1339 aa8.64□□□□□ -1.03
MRPS28-203ENST00000518371 FOXO3O43524 673 aa8.64□□□□□ -1.03
MRPS28-203ENST00000518371 S1PR4O95977 384 aa8.64□□□□□ -1.03
MRPS28-203ENST00000518371 CARD11Q9BXL7 1154 aa8.64□□□□□ -1.03
MRPS28-203ENST00000518371 TIMELESSQ9UNS1 1208 aa8.64□□□□□ -1.03
MRPS28-203ENST00000518371 ROBO1Q9Y6N7 1651 aa8.64□□□□□ -1.03
MRPS28-203ENST00000518371 DLC1Q96QB1 1528 aa8.64□□□□□ -1.03
MRPS28-203ENST00000518371 JCADQ9P266 1359 aa8.63□□□□□ -1.03
MRPS28-203ENST00000518371 CENPJQ9HC77 1338 aaPredicted RBP8.63□□□□□ -1.03
MRPS28-203ENST00000518371 TLL1O43897 1013 aa8.63□□□□□ -1.03
MRPS28-203ENST00000518371 SLC4A3P48751 1232 aa8.63□□□□□ -1.03
MRPS28-203ENST00000518371 XPCQ01831 940 aaPredicted RBP8.63□□□□□ -1.03
MRPS28-203ENST00000518371 PXYLP1Q8TE99 480 aa8.63□□□□□ -1.03
MRPS28-203ENST00000518371 CDK19Q9BWU1 502 aa8.63□□□□□ -1.03
MRPS28-203ENST00000518371 NPHP3Q7Z494 1330 aa8.62□□□□□ -1.03
MRPS28-203ENST00000518371 NUTM2BA6NNL0 878 aaPredicted RBP8.62□□□□□ -1.03
MRPS28-203ENST00000518371 NUTM2EB1AL46 878 aaPredicted RBP8.62□□□□□ -1.03
MRPS28-203ENST00000518371 SLC10A3P09131 477 aa8.62□□□□□ -1.03
MRPS28-203ENST00000518371 SRPK2P78362 688 aaKnown RBP8.62□□□□□ -1.03
MRPS28-203ENST00000518371 PSME1Q06323 249 aa8.62□□□□□ -1.03
MRPS28-203ENST00000518371 KRT28Q7Z3Y7 464 aa8.62□□□□□ -1.03
MRPS28-203ENST00000518371 NUTM2AQ8IVF1 878 aaPredicted RBP8.62□□□□□ -1.03
MRPS28-203ENST00000518371 PMFBP1Q8TBY8 1022 aa8.62□□□□□ -1.03
MRPS28-203ENST00000518371 NALCNQ8IZF0 1738 aa8.62□□□□□ -1.03
MRPS28-203ENST00000518371 EIF3AQ14152 1382 aaKnown RBP8.61□□□□□ -1.03
MRPS28-203ENST00000518371 OATP04181 439 aa8.61□□□□□ -1.03
MRPS28-203ENST00000518371 MEX3CQ5U5Q3 659 aaKnown RBP8.61□□□□□ -1.03
MRPS28-203ENST00000518371 NGDNQ8NEJ9 315 aaKnown RBP8.61□□□□□ -1.03
MRPS28-203ENST00000518371 NUDT16Q96DE0 195 aaKnown RBP8.61□□□□□ -1.03
MRPS28-203ENST00000518371 PKD2L1Q9P0L9 805 aa8.61□□□□□ -1.03
MRPS28-203ENST00000518371 CDC42BPGQ6DT37 1551 aa8.61□□□□□ -1.03
MRPS28-203ENST00000518371 KNDC1Q76NI1 1749 aa8.6□□□□□ -1.03
MRPS28-203ENST00000518371 SOS2Q07890 1332 aaPredicted RBP8.6□□□□□ -1.03
MRPS28-203ENST00000518371 SPATA31A6Q5VVP1 1343 aa8.6□□□□□ -1.03
MRPS28-203ENST00000518371 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.6□□□□□ -1.03
MRPS28-203ENST00000518371 AXIN1O15169 862 aa8.6□□□□□ -1.03
MRPS28-203ENST00000518371 GNPATO15228 680 aa8.6□□□□□ -1.03
MRPS28-203ENST00000518371 AVPP01185 164 aa8.6□□□□□ -1.03
MRPS28-203ENST00000518371 LMOD2Q6P5Q4 547 aa8.6□□□□□ -1.03
MRPS28-203ENST00000518371 METTL3Q86U44 580 aaKnown RBP8.6□□□□□ -1.03
MRPS28-203ENST00000518371 PHLPP1O60346 1717 aa8.6□□□□□ -1.03
MRPS28-203ENST00000518371 EVC2Q86UK5 1308 aa8.59□□□□□ -1.03
MRPS28-203ENST00000518371 PRR36Q9H6K5 1346 aa8.59□□□□□ -1.03
MRPS28-203ENST00000518371 FOXC1Q12948 553 aa8.59□□□□□ -1.03
MRPS28-203ENST00000518371 NLRP7Q8WX94 980 aa8.59□□□□□ -1.03
MRPS28-203ENST00000518371 KIAA1210Q9ULL0 1709 aa8.59□□□□□ -1.03
MRPS28-203ENST00000518371 AHDC1Q5TGY3 1603 aaPredicted RBP8.58□□□□□ -1.04
MRPS28-203ENST00000518371 ANKARQ7Z5J8 1434 aa8.58□□□□□ -1.04
MRPS28-203ENST00000518371 CFHP08603 1231 aa8.58□□□□□ -1.04
MRPS28-203ENST00000518371 PLA2G2CQ5R387 149 aa8.58□□□□□ -1.04
MRPS28-203ENST00000518371 LCE2CQ5TA81 110 aa8.58□□□□□ -1.04
MRPS28-203ENST00000518371 GPRASP1Q5JY77 1395 aa8.58□□□□□ -1.04
MRPS28-203ENST00000518371 ADAMTS2O95450 1211 aa8.57□□□□□ -1.04
MRPS28-203ENST00000518371 PHOX2BQ99453 314 aa8.57□□□□□ -1.04
MRPS28-203ENST00000518371 PNPLA6Q8IY17 1366 aa8.57□□□□□ -1.04
MRPS28-203ENST00000518371 SPATA31A3Q5VYP0 1347 aa8.56□□□□□ -1.04
MRPS28-203ENST00000518371 ST20-MTHFSA0A0A6YYL1 179 aa8.56□□□□□ -1.04
MRPS28-203ENST00000518371 PLEKHG3A1L390 1219 aa8.56□□□□□ -1.04
MRPS28-203ENST00000518371 ACTN4O43707 911 aaKnown RBP8.56□□□□□ -1.04
MRPS28-203ENST00000518371 CTC1Q2NKJ3 1217 aa8.56□□□□□ -1.04
MRPS28-203ENST00000518371 CABP1Q9NZU7 370 aa8.56□□□□□ -1.04
MRPS28-203ENST00000518371 TULP4Q9NRJ4 1543 aa8.55□□□□□ -1.04
MRPS28-203ENST00000518371 COL16A1Q07092 1604 aaPredicted RBP8.55□□□□□ -1.04
MRPS28-203ENST00000518371 TRPM1Q7Z4N2 1603 aa8.55□□□□□ -1.04
MRPS28-203ENST00000518371 FMN2Q9NZ56 1722 aa8.55□□□□□ -1.04
MRPS28-203ENST00000518371 SLC24A1O60721 1099 aa8.55□□□□□ -1.04
MRPS28-203ENST00000518371 SMCPP49901 116 aaPredicted RBP8.55□□□□□ -1.04
MRPS28-203ENST00000518371 NGLY1Q96IV0 654 aa8.55□□□□□ -1.04
MRPS28-203ENST00000518371 C8orf37Q96NL8 207 aa8.55□□□□□ -1.04
MRPS28-203ENST00000518371 TOR4AQ9NXH8 423 aa8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms