RNA–Protein interactions for RNA: ENST00000518080.2

HMBOX1-205, Transcript of homeobox containing 1, humanhuman

TSL 4

Gene HMBOX1, Length 559 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMBOX1-205ENST00000518080 LARP1Q6PKG0 1096 aaKnown RBP12.88□□□□□ -0.35
HMBOX1-205ENST00000518080 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.88□□□□□ -0.359e-8■■□□□ 13.7
HMBOX1-205ENST00000518080 PCDH11XQ9BZA7 1347 aa12.88□□□□□ -0.35
HMBOX1-205ENST00000518080 PCDH11YQ9BZA8 1340 aa12.88□□□□□ -0.35
HMBOX1-205ENST00000518080 CEMIPQ8WUJ3 1361 aa12.87□□□□□ -0.35
HMBOX1-205ENST00000518080 HSP90AB1P08238 724 aaKnown RBP12.87□□□□□ -0.35
HMBOX1-205ENST00000518080 IL2RBP14784 551 aa12.87□□□□□ -0.35
HMBOX1-205ENST00000518080 ALDH1L2Q3SY69 923 aa12.87□□□□□ -0.35
HMBOX1-205ENST00000518080 MPRIPQ6WCQ1 1025 aa12.87□□□□□ -0.35
HMBOX1-205ENST00000518080 FTSJ3Q8IY81 847 aaKnown RBP12.87□□□□□ -0.35
HMBOX1-205ENST00000518080 IFNL2Q8IZJ0 200 aa12.87□□□□□ -0.35
HMBOX1-205ENST00000518080 USP35Q9P2H5 1018 aa12.87□□□□□ -0.35
HMBOX1-205ENST00000518080 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.86□□□□□ -0.35
HMBOX1-205ENST00000518080 ELL2O00472 640 aaPredicted RBP12.86□□□□□ -0.35
HMBOX1-205ENST00000518080 CHL1O00533 1208 aa12.86□□□□□ -0.35
HMBOX1-205ENST00000518080 MS4A1P11836 297 aa12.86□□□□□ -0.35
HMBOX1-205ENST00000518080 TAF7Q15545 349 aaPredicted RBP12.86□□□□□ -0.35
HMBOX1-205ENST00000518080 ZKSCAN2Q63HK3 967 aa12.86□□□□□ -0.35
HMBOX1-205ENST00000518080 IL17REQ8NFR9 667 aa12.86□□□□□ -0.35
HMBOX1-205ENST00000518080 BABAM1Q9NWV8 329 aa12.86□□□□□ -0.35
HMBOX1-205ENST00000518080 MRC1P22897 1456 aa12.85□□□□□ -0.35
HMBOX1-205ENST00000518080 IPO8O15397 1037 aaKnown RBP12.85□□□□□ -0.35
HMBOX1-205ENST00000518080 RNMTO43148 476 aaKnown RBP12.85□□□□□ -0.35
HMBOX1-205ENST00000518080 SSH1Q8WYL5 1049 aa12.85□□□□□ -0.35
HMBOX1-205ENST00000518080 CRBNQ96SW2 442 aa12.85□□□□□ -0.35
HMBOX1-205ENST00000518080 PHKG2P15735 406 aa12.84□□□□□ -0.35
HMBOX1-205ENST00000518080 EXOC6Q8TAG9 804 aa12.84□□□□□ -0.35
HMBOX1-205ENST00000518080 CCDC136Q96JN2 1154 aa12.84□□□□□ -0.35
HMBOX1-205ENST00000518080 MIS18AQ9NYP9 233 aa12.84□□□□□ -0.35
HMBOX1-205ENST00000518080 CCDC9Q9Y3X0 531 aaKnown RBP12.84□□□□□ -0.35
HMBOX1-205ENST00000518080 KDM6AO15550 1401 aaPredicted RBP12.84□□□□□ -0.35
HMBOX1-205ENST00000518080 SPATA31A6Q5VVP1 1343 aa12.84□□□□□ -0.35
HMBOX1-205ENST00000518080 KAT6BQ8WYB5 2073 aa12.84□□□□□ -0.35
HMBOX1-205ENST00000518080 SPDYE2BA6NHP3 402 aa12.83□□□□□ -0.36
HMBOX1-205ENST00000518080 BTBD11A6QL63 1104 aa12.83□□□□□ -0.36
HMBOX1-205ENST00000518080 SPDYE6P0CI01 402 aa12.83□□□□□ -0.36
HMBOX1-205ENST00000518080 ATXN8OSP0DMR3 200 aa12.83□□□□□ -0.36
HMBOX1-205ENST00000518080 PDE3AQ14432 1141 aa12.83□□□□□ -0.36
HMBOX1-205ENST00000518080 SPDYE2Q495Y8 402 aa12.83□□□□□ -0.36
HMBOX1-205ENST00000518080 MEX3CQ5U5Q3 659 aaKnown RBP12.83□□□□□ -0.36
HMBOX1-205ENST00000518080 TSPYL6Q8N831 410 aa12.83□□□□□ -0.36
HMBOX1-205ENST00000518080 C8orf58Q8NAV2 365 aa12.83□□□□□ -0.36
HMBOX1-205ENST00000518080 ZCRB1Q8TBF4 217 aaKnown RBP12.83□□□□□ -0.36
HMBOX1-205ENST00000518080 LAMB4A4D0S4 1761 aa12.83□□□□□ -0.36
HMBOX1-205ENST00000518080 TOGARAM1Q9Y4F4 1720 aa12.82□□□□□ -0.36
HMBOX1-205ENST00000518080 VAMP4O75379 141 aa12.82□□□□□ -0.36
HMBOX1-205ENST00000518080 C20orf194Q5TEA3 1177 aa12.82□□□□□ -0.36
HMBOX1-205ENST00000518080 DCAF5Q96JK2 942 aa12.82□□□□□ -0.36
HMBOX1-205ENST00000518080 C8orf37Q96NL8 207 aa12.82□□□□□ -0.36
HMBOX1-205ENST00000518080 STK31Q9BXU1 1019 aa12.82□□□□□ -0.36
HMBOX1-205ENST00000518080 LGR6Q9HBX8 967 aa12.82□□□□□ -0.36
HMBOX1-205ENST00000518080 SOS1Q07889 1333 aaPredicted RBP12.82□□□□□ -0.36
HMBOX1-205ENST00000518080 SLIT2O94813 1529 aa12.82□□□□□ -0.36
HMBOX1-205ENST00000518080 DOT1LQ8TEK3 1739 aa12.82□□□□□ -0.36
HMBOX1-205ENST00000518080 ITGB4P16144 1822 aa12.81□□□□□ -0.36
HMBOX1-205ENST00000518080 TNS2Q63HR2 1409 aa12.81□□□□□ -0.36
HMBOX1-205ENST00000518080 C5P01031 1676 aa12.81□□□□□ -0.36
HMBOX1-205ENST00000518080 KRT24Q2M2I5 525 aa12.81□□□□□ -0.36
HMBOX1-205ENST00000518080 B4GALNT3Q6L9W6 998 aa12.81□□□□□ -0.36
HMBOX1-205ENST00000518080 CHMP4AQ9BY43 222 aa12.81□□□□□ -0.36
HMBOX1-205ENST00000518080 DISP2A7MBM2 1401 aa12.8□□□□□ -0.36
HMBOX1-205ENST00000518080 TCERG1O14776 1098 aaKnown RBP12.8□□□□□ -0.36
HMBOX1-205ENST00000518080 CYP27B1O15528 508 aa12.8□□□□□ -0.36
HMBOX1-205ENST00000518080 ATF7IPQ6VMQ6 1270 aa12.8□□□□□ -0.36
HMBOX1-205ENST00000518080 DZIP1LQ8IYY4 767 aaKnown RBP12.8□□□□□ -0.36
HMBOX1-205ENST00000518080 DDX54Q8TDD1 881 aaKnown RBP12.8□□□□□ -0.36
HMBOX1-205ENST00000518080 PANK1Q8TE04 598 aa12.8□□□□□ -0.36
HMBOX1-205ENST00000518080 CLUAP1Q96AJ1 413 aa12.8□□□□□ -0.36
HMBOX1-205ENST00000518080 NGLY1Q96IV0 654 aa12.8□□□□□ -0.36
HMBOX1-205ENST00000518080 NOB1Q9ULX3 412 aaKnown RBP12.8□□□□□ -0.36
HMBOX1-205ENST00000518080 LRP6O75581 1613 aa12.8□□□□□ -0.36
HMBOX1-205ENST00000518080 PAPPAQ13219 1627 aa12.8□□□□□ -0.36
HMBOX1-205ENST00000518080 N4BP2Q86UW6 1770 aaPredicted RBP12.79□□□□□ -0.36
HMBOX1-205ENST00000518080 CABP4P57796 275 aa12.79□□□□□ -0.36
HMBOX1-205ENST00000518080 CCDC30Q5VVM6 783 aa12.79□□□□□ -0.36
HMBOX1-205ENST00000518080 TTC5Q8N0Z6 440 aa12.79□□□□□ -0.36
HMBOX1-205ENST00000518080 MRPL50Q8N5N7 158 aaKnown RBP12.79□□□□□ -0.36
HMBOX1-205ENST00000518080 CDCA7Q9BWT1 371 aaPredicted RBP12.79□□□□□ -0.36
HMBOX1-205ENST00000518080 SLC52A2Q9HAB3 445 aa12.79□□□□□ -0.36
HMBOX1-205ENST00000518080 COG6Q9Y2V7 657 aa12.79□□□□□ -0.36
HMBOX1-205ENST00000518080 UBR2Q8IWV8 1755 aa12.79□□□□□ -0.36
HMBOX1-205ENST00000518080 HSPA1LP34931 641 aa12.78□□□□□ -0.36
HMBOX1-205ENST00000518080 ITPRIPQ8IWB1 547 aa12.78□□□□□ -0.36
HMBOX1-205ENST00000518080 API5Q9BZZ5 524 aaKnown RBP12.78□□□□□ -0.36
HMBOX1-205ENST00000518080 THRAP3Q9Y2W1 955 aaKnown RBP12.78□□□□□ -0.36
HMBOX1-205ENST00000518080 HOXB7P09629 217 aa12.77□□□□□ -0.37
HMBOX1-205ENST00000518080 PRKAR2AP13861 404 aaKnown RBP12.77□□□□□ -0.37
HMBOX1-205ENST00000518080 TRIM27P14373 513 aa12.77□□□□□ -0.37
HMBOX1-205ENST00000518080 HDGFL1Q5TGJ6 251 aa12.77□□□□□ -0.37
HMBOX1-205ENST00000518080 SPATA31A1Q5TZJ5 1347 aa12.77□□□□□ -0.37
HMBOX1-205ENST00000518080 A0A0G2JS52 829 aa12.76□□□□□ -0.37
HMBOX1-205ENST00000518080 BRPF1P55201 1214 aaPredicted RBP12.76□□□□□ -0.37
HMBOX1-205ENST00000518080 EIF4A1P60842 406 aaKnown RBP12.76□□□□□ -0.37
HMBOX1-205ENST00000518080 MYT1Q01538 1121 aa12.76□□□□□ -0.37
HMBOX1-205ENST00000518080 MVPQ14764 893 aaKnown RBP12.76□□□□□ -0.37
HMBOX1-205ENST00000518080 UNC5CLQ8IV45 518 aa12.76□□□□□ -0.37
HMBOX1-205ENST00000518080 SPATA31A5Q5VU36 1347 aa12.76□□□□□ -0.37
HMBOX1-205ENST00000518080 SPATA31A7Q8IWB4 1347 aa12.76□□□□□ -0.37
HMBOX1-205ENST00000518080 EXOC5O00471 708 aa12.75□□□□□ -0.37
HMBOX1-205ENST00000518080 PTPRCP08575 1304 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms