RNA–Protein interactions for RNA: ENST00000517979.1

CCDC25-202, Transcript of coiled-coil domain containing 25, humanhuman

TSL 1 (best)

Gene CCDC25, Length 877 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC25-202ENST00000517979 SMARCC1Q92922 1105 aaPredicted RBP18.58■□□□□ 0.56
CCDC25-202ENST00000517979 TMOD3Q9NYL9 352 aa18.58■□□□□ 0.56
CCDC25-202ENST00000517979 ZNF530Q6P9A1 599 aaPredicted RBP18.57■□□□□ 0.56
CCDC25-202ENST00000517979 QSER1Q2KHR3 1735 aa18.57■□□□□ 0.56
CCDC25-202ENST00000517979 C5P01031 1676 aa18.57■□□□□ 0.56
CCDC25-202ENST00000517979 TUBGCP6Q96RT7 1819 aa18.56■□□□□ 0.56
CCDC25-202ENST00000517979 PTGER2P43116 358 aa18.56■□□□□ 0.56
CCDC25-202ENST00000517979 AMOTQ4VCS5 1084 aa18.56■□□□□ 0.56
CCDC25-202ENST00000517979 KDRP35968 1356 aa18.55■□□□□ 0.56
CCDC25-202ENST00000517979 PNPLA7Q6ZV29 1317 aa18.55■□□□□ 0.56
CCDC25-202ENST00000517979 HSP90AB1P08238 724 aaKnown RBP18.55■□□□□ 0.56
CCDC25-202ENST00000517979 C1orf141Q5JVX7 400 aa18.54■□□□□ 0.56
CCDC25-202ENST00000517979 HMGB2P26583 209 aaKnown RBP18.53■□□□□ 0.56
CCDC25-202ENST00000517979 DCAF5Q96JK2 942 aa18.53■□□□□ 0.56
CCDC25-202ENST00000517979 DIAPH1O60610 1272 aaKnown RBP18.52■□□□□ 0.56
CCDC25-202ENST00000517979 TAF1LQ8IZX4 1826 aa18.51■□□□□ 0.55
CCDC25-202ENST00000517979 KDM6AO15550 1401 aaPredicted RBP18.51■□□□□ 0.55
CCDC25-202ENST00000517979 ERVV-2B6SEH9 535 aa18.51■□□□□ 0.55
CCDC25-202ENST00000517979 HMOX1P09601 288 aa18.51■□□□□ 0.55
CCDC25-202ENST00000517979 SLC16A10Q8TF71 515 aa18.51■□□□□ 0.55
CCDC25-202ENST00000517979 ASAP1Q9ULH1 1129 aa18.51■□□□□ 0.55
CCDC25-202ENST00000517979 LOC102724428A0A0B4J2F2 783 aa18.5■□□□□ 0.55
CCDC25-202ENST00000517979 SIK1P57059 783 aa18.5■□□□□ 0.55
CCDC25-202ENST00000517979 SGIP1Q9BQI5 828 aa18.5■□□□□ 0.55
CCDC25-202ENST00000517979 RBM42Q9BTD8 480 aaKnown RBP18.5■□□□□ 0.55
CCDC25-202ENST00000517979 C4BP0C0L5 1744 aa18.49■□□□□ 0.55
CCDC25-202ENST00000517979 AK7Q96M32 723 aa18.49■□□□□ 0.55
CCDC25-202ENST00000517979 COL3A1P02461 1466 aaPredicted RBP18.49■□□□□ 0.55
CCDC25-202ENST00000517979 POLD1P28340 1107 aa18.48■□□□□ 0.55
CCDC25-202ENST00000517979 CABP4P57796 275 aa18.48■□□□□ 0.55
CCDC25-202ENST00000517979 ARXQ96QS3 562 aa18.48■□□□□ 0.55
CCDC25-202ENST00000517979 ATG3Q9NT62 314 aa18.48■□□□□ 0.55
CCDC25-202ENST00000517979 U2SURPO15042 1029 aaKnown RBP18.47■□□□□ 0.55
CCDC25-202ENST00000517979 COL23A1Q86Y22 540 aaPredicted RBP18.47■□□□□ 0.55
CCDC25-202ENST00000517979 FHDC1Q9C0D6 1143 aaPredicted RBP18.47■□□□□ 0.55
CCDC25-202ENST00000517979 ATP6V1AP38606 617 aa18.46■□□□□ 0.55
CCDC25-202ENST00000517979 LINC00116Q8NCU8 138 aa18.46■□□□□ 0.55
CCDC25-202ENST00000517979 AKAP4Q5JQC9 854 aa18.45■□□□□ 0.54
CCDC25-202ENST00000517979 FLAD1Q8NFF5 587 aa18.45■□□□□ 0.54
CCDC25-202ENST00000517979 CFAP53Q96M91 514 aa18.45■□□□□ 0.54
CCDC25-202ENST00000517979 SSUH2Q9Y2M2 353 aa18.45■□□□□ 0.54
CCDC25-202ENST00000517979 PHF14O94880 888 aa18.44■□□□□ 0.54
CCDC25-202ENST00000517979 ITPK1Q13572 414 aa18.44■□□□□ 0.54
CCDC25-202ENST00000517979 COL24A1Q17RW2 1714 aa18.43■□□□□ 0.54
CCDC25-202ENST00000517979 SCN11AQ9UI33 1791 aa18.43■□□□□ 0.54
CCDC25-202ENST00000517979 MSL1Q68DK7 614 aa18.43■□□□□ 0.54
CCDC25-202ENST00000517979 KLHL34Q8N239 644 aa18.43■□□□□ 0.54
CCDC25-202ENST00000517979 SYT17Q9BSW7 474 aa18.43■□□□□ 0.54
CCDC25-202ENST00000517979 UBR3Q6ZT12 1888 aa18.42■□□□□ 0.54
CCDC25-202ENST00000517979 NFATC2IPQ8NCF5 419 aa18.42■□□□□ 0.54
CCDC25-202ENST00000517979 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.41■□□□□ 0.54
CCDC25-202ENST00000517979 GNPATO15228 680 aa18.41■□□□□ 0.54
CCDC25-202ENST00000517979 PPP2R1AP30153 589 aa18.41■□□□□ 0.54
CCDC25-202ENST00000517979 MTHFSDQ2M296 383 aaKnown RBP18.41■□□□□ 0.54
CCDC25-202ENST00000517979 AMIGO3Q86WK7 504 aa18.41■□□□□ 0.54
CCDC25-202ENST00000517979 MAP3K5Q99683 1374 aa18.41■□□□□ 0.54
CCDC25-202ENST00000517979 SSFA2P28290 1259 aa18.4■□□□□ 0.54
CCDC25-202ENST00000517979 SMIM5Q71RC9 77 aa18.4■□□□□ 0.54
CCDC25-202ENST00000517979 ZNF831Q5JPB2 1677 aa18.39■□□□□ 0.53
CCDC25-202ENST00000517979 RNMTO43148 476 aaKnown RBP18.39■□□□□ 0.53
CCDC25-202ENST00000517979 PTCD1O75127 700 aaKnown RBP18.39■□□□□ 0.53
CCDC25-202ENST00000517979 SLC4A9Q96Q91 983 aa18.39■□□□□ 0.53
CCDC25-202ENST00000517979 NUDCQ9Y266 331 aa18.39■□□□□ 0.53
CCDC25-202ENST00000517979 MRC1P22897 1456 aa18.39■□□□□ 0.53
CCDC25-202ENST00000517979 SLC52A2Q9HAB3 445 aa18.38■□□□□ 0.53
CCDC25-202ENST00000517979 LGR6Q9HBX8 967 aa18.38■□□□□ 0.53
CCDC25-202ENST00000517979 GAS2L2Q8NHY3 880 aa18.37■□□□□ 0.53
CCDC25-202ENST00000517979 COL5A3P25940 1745 aaPredicted RBP18.37■□□□□ 0.53
CCDC25-202ENST00000517979 VIRMAQ69YN4 1812 aaKnown RBP18.37■□□□□ 0.53
CCDC25-202ENST00000517979 ADAMTS7Q9UKP4 1686 aa18.35■□□□□ 0.53
CCDC25-202ENST00000517979 CNTNAP4Q9C0A0 1308 aa18.35■□□□□ 0.53
CCDC25-202ENST00000517979 U2AF1L5P0DN76 240 aaPredicted RBP18.35■□□□□ 0.53
CCDC25-202ENST00000517979 PRKAR2BP31323 418 aa18.35■□□□□ 0.53
CCDC25-202ENST00000517979 U2AF1Q01081 240 aaKnown RBP eCLIP18.35■□□□□ 0.53
CCDC25-202ENST00000517979 RTCBQ9Y3I0 505 aaKnown RBP18.35■□□□□ 0.53
CCDC25-202ENST00000517979 RC3H1Q5TC82 1133 aaKnown RBP18.34■□□□□ 0.53
CCDC25-202ENST00000517979 RSPH6AQ9H0K4 717 aa18.34■□□□□ 0.53
CCDC25-202ENST00000517979 TJP1Q07157 1748 aa18.33■□□□□ 0.52
CCDC25-202ENST00000517979 UTRNP46939 3433 aa18.33■□□□□ 0.52
CCDC25-202ENST00000517979 GNAT3A8MTJ3 354 aa18.33■□□□□ 0.52
CCDC25-202ENST00000517979 SLC39A6Q13433 755 aa18.32■□□□□ 0.52
CCDC25-202ENST00000517979 TRAPPC3LQ5T215 181 aa18.32■□□□□ 0.52
CCDC25-202ENST00000517979 CICQ96RK0 1608 aaPredicted RBP18.31■□□□□ 0.52
CCDC25-202ENST00000517979 YY1P25490 414 aa18.31■□□□□ 0.52
CCDC25-202ENST00000517979 CRKLP46109 303 aaKnown RBP18.31■□□□□ 0.52
CCDC25-202ENST00000517979 NLGN2Q8NFZ4 835 aa18.31■□□□□ 0.52
CCDC25-202ENST00000517979 PHACTR3Q96KR7 559 aa18.31■□□□□ 0.52
CCDC25-202ENST00000517979 KCPQ6ZWJ8 1503 aa18.3■□□□□ 0.52
CCDC25-202ENST00000517979 RPS6KA4O75676 772 aa18.3■□□□□ 0.52
CCDC25-202ENST00000517979 TEFQ10587 303 aa18.3■□□□□ 0.52
CCDC25-202ENST00000517979 PELP1Q8IZL8 1130 aaKnown RBP18.3■□□□□ 0.52
CCDC25-202ENST00000517979 MYH14Q7Z406 1995 aaKnown RBP18.3■□□□□ 0.52
CCDC25-202ENST00000517979 RFC4P35249 363 aa18.29■□□□□ 0.52
CCDC25-202ENST00000517979 GPR162Q16538 588 aa18.29■□□□□ 0.52
CCDC25-202ENST00000517979 DNAJC10Q8IXB1 793 aa18.29■□□□□ 0.52
CCDC25-202ENST00000517979 TTC5Q8N0Z6 440 aa18.29■□□□□ 0.52
CCDC25-202ENST00000517979 FCHSD2O94868 740 aa18.28■□□□□ 0.52
CCDC25-202ENST00000517979 DDX10Q13206 875 aaKnown RBP18.28■□□□□ 0.52
CCDC25-202ENST00000517979 IL17REQ8NFR9 667 aa18.28■□□□□ 0.52
CCDC25-202ENST00000517979 ARHGEF1Q92888 912 aaKnown RBP18.28■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 104.1 ms