RNA–Protein interactions for RNA: ENST00000517836.5

PCM1-205, Transcript of pericentriolar material 1, humanhuman

TSL 3

Gene PCM1, Length 580 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-205ENST00000517836 OXLD1Q5BKU9 147 aa8.76□□□□□ -1.01
PCM1-205ENST00000517836 LARP1Q6PKG0 1096 aaKnown RBP8.76□□□□□ -1.01
PCM1-205ENST00000517836 PRICKLE2Q7Z3G6 844 aa8.76□□□□□ -1.01
PCM1-205ENST00000517836 VWA5B2Q8N398 1253 aa8.76□□□□□ -1.01
PCM1-205ENST00000517836 CNTNAP3BQ96NU0 1288 aa8.76□□□□□ -1.01
PCM1-205ENST00000517836 CNTNAP3Q9BZ76 1288 aa8.76□□□□□ -1.01
PCM1-205ENST00000517836 RHOQP17081 205 aa8.75□□□□□ -1.01
PCM1-205ENST00000517836 ITGA6P23229 1130 aa8.75□□□□□ -1.01
PCM1-205ENST00000517836 CDC14CA4D256 554 aa8.74□□□□□ -1.01
PCM1-205ENST00000517836 USP17L15C9J2P7 530 aa8.74□□□□□ -1.01
PCM1-205ENST00000517836 USP17L10C9JJH3 530 aa8.74□□□□□ -1.01
PCM1-205ENST00000517836 USP17L13C9JLJ4 530 aa8.74□□□□□ -1.01
PCM1-205ENST00000517836 USP17L12C9JPN9 530 aa8.74□□□□□ -1.01
PCM1-205ENST00000517836 USP17L11C9JVI0 530 aa8.74□□□□□ -1.01
PCM1-205ENST00000517836 USP17L21D6R901 530 aa8.74□□□□□ -1.01
PCM1-205ENST00000517836 USP17L18D6R9N7 530 aa8.74□□□□□ -1.01
PCM1-205ENST00000517836 USP17L22D6RA61 530 aa8.74□□□□□ -1.01
PCM1-205ENST00000517836 USP17L17D6RBQ6 530 aa8.74□□□□□ -1.01
PCM1-205ENST00000517836 USP17L19D6RCP7 530 aa8.74□□□□□ -1.01
PCM1-205ENST00000517836 USP17L20D6RJB6 530 aa8.74□□□□□ -1.01
PCM1-205ENST00000517836 MEN1O00255 615 aa8.74□□□□□ -1.01
PCM1-205ENST00000517836 RASA1P20936 1047 aa8.74□□□□□ -1.01
PCM1-205ENST00000517836 USP17L24Q0WX57 530 aa8.74□□□□□ -1.01
PCM1-205ENST00000517836 RNFT1Q5M7Z0 435 aa8.74□□□□□ -1.01
PCM1-205ENST00000517836 COL25A1Q9BXS0 654 aaPredicted RBP8.74□□□□□ -1.01
PCM1-205ENST00000517836 CUEDC1Q9NWM3 386 aaPredicted RBP8.74□□□□□ -1.01
PCM1-205ENST00000517836 A0A1W2PRU2 124 aa8.73□□□□□ -1.01
PCM1-205ENST00000517836 MYCP01106 439 aaPredicted RBP8.73□□□□□ -1.01
PCM1-205ENST00000517836 ERVK-9P63128 1117 aa8.73□□□□□ -1.01
PCM1-205ENST00000517836 NANOS1Q8WY41 292 aaKnown RBP8.73□□□□□ -1.01
PCM1-205ENST00000517836 CDCA7Q9BWT1 371 aaPredicted RBP8.73□□□□□ -1.01
PCM1-205ENST00000517836 NOVA2Q9UNW9 492 aaKnown RBP8.73□□□□□ -1.01
PCM1-205ENST00000517836 PTK7Q13308 1070 aa8.72□□□□□ -1.01
PCM1-205ENST00000517836 CRTC2Q53ET0 693 aaPredicted RBP8.72□□□□□ -1.01
PCM1-205ENST00000517836 CC2D2BQ6DHV5 1058 aa8.72□□□□□ -1.01
PCM1-205ENST00000517836 LYSMD3Q7Z3D4 306 aa8.72□□□□□ -1.01
PCM1-205ENST00000517836 LARGE2Q8N3Y3 721 aa8.72□□□□□ -1.01
PCM1-205ENST00000517836 OGFOD1Q8N543 542 aa8.72□□□□□ -1.01
PCM1-205ENST00000517836 ESF1Q9H501 851 aaKnown RBP8.72□□□□□ -1.01
PCM1-205ENST00000517836 DNAAF2Q9NVR5 837 aaKnown RBP8.72□□□□□ -1.01
PCM1-205ENST00000517836 RNF144AP50876 292 aaPredicted RBP8.71□□□□□ -1.02
PCM1-205ENST00000517836 GTF2IP78347 998 aa8.71□□□□□ -1.02
PCM1-205ENST00000517836 CLDN10P78369 228 aa8.7□□□□□ -1.02
PCM1-205ENST00000517836 ANKMY2Q8IV38 441 aa8.7□□□□□ -1.02
PCM1-205ENST00000517836 SIX5Q8N196 739 aa8.7□□□□□ -1.02
PCM1-205ENST00000517836 OSBPL3Q9H4L5 887 aa8.7□□□□□ -1.02
PCM1-205ENST00000517836 ZMIZ1Q9ULJ6 1067 aa8.7□□□□□ -1.02
PCM1-205ENST00000517836 RBM19Q9Y4C8 960 aaKnown RBP8.7□□□□□ -1.02
PCM1-205ENST00000517836 KCTD17Q8N5Z5 321 aa8.69□□□□□ -1.02
PCM1-205ENST00000517836 FAM200AQ8TCP9 573 aa8.69□□□□□ -1.02
PCM1-205ENST00000517836 ARHGEF10LQ9HCE6 1279 aa8.69□□□□□ -1.02
PCM1-205ENST00000517836 RAB6BQ9NRW1 208 aa8.69□□□□□ -1.02
PCM1-205ENST00000517836 PCDHGA11Q9Y5H2 935 aa8.69□□□□□ -1.02
PCM1-205ENST00000517836 TMEM88BA6NKF7 163 aa8.68□□□□□ -1.02
PCM1-205ENST00000517836 POU4F2Q12837 409 aa8.68□□□□□ -1.02
PCM1-205ENST00000517836 SV2AQ7L0J3 742 aa8.68□□□□□ -1.02
PCM1-205ENST00000517836 ZBTB7BO15156 539 aaPredicted RBP8.67□□□□□ -1.02
PCM1-205ENST00000517836 PSME1Q06323 249 aa8.67□□□□□ -1.02
PCM1-205ENST00000517836 TMEM164Q5U3C3 297 aa8.67□□□□□ -1.02
PCM1-205ENST00000517836 WHAMMQ8TF30 809 aa8.67□□□□□ -1.02
PCM1-205ENST00000517836 STK32AQ8WU08 396 aa8.67□□□□□ -1.02
PCM1-205ENST00000517836 ZNF594Q96JF6 807 aaPredicted RBP8.67□□□□□ -1.02
PCM1-205ENST00000517836 STAU1O95793 577 aaKnown RBP8.66□□□□□ -1.02
PCM1-205ENST00000517836 SUZ12Q15022 739 aaKnown RBP8.66□□□□□ -1.02
PCM1-205ENST00000517836 CCDC102BQ68D86 513 aa8.66□□□□□ -1.02
PCM1-205ENST00000517836 B4GALNT3Q6L9W6 998 aa8.66□□□□□ -1.02
PCM1-205ENST00000517836 NLRP3Q96P20 1036 aa8.66□□□□□ -1.02
PCM1-205ENST00000517836 KIAA1024Q9UPX6 916 aa8.66□□□□□ -1.02
PCM1-205ENST00000517836 PATL2C9JE40 543 aaKnown RBP8.65□□□□□ -1.02
PCM1-205ENST00000517836 SEC13P55735 322 aa8.65□□□□□ -1.02
PCM1-205ENST00000517836 DPYDQ12882 1025 aa8.65□□□□□ -1.02
PCM1-205ENST00000517836 CLN3Q13286 438 aa8.65□□□□□ -1.02
PCM1-205ENST00000517836 SWI5Q1ZZU3 235 aa8.65□□□□□ -1.02
PCM1-205ENST00000517836 SLC27A3Q5K4L6 730 aa8.65□□□□□ -1.02
PCM1-205ENST00000517836 CYP2U1Q7Z449 544 aa8.65□□□□□ -1.02
PCM1-205ENST00000517836 TPCN2Q8NHX9 752 aa8.65□□□□□ -1.02
PCM1-205ENST00000517836 GPR25O00155 361 aa8.64□□□□□ -1.03
PCM1-205ENST00000517836 DKK1O94907 266 aa8.64□□□□□ -1.03
PCM1-205ENST00000517836 BRD1O95696 1058 aa8.64□□□□□ -1.03
PCM1-205ENST00000517836 RIPOR1Q6ZS17 1223 aa8.64□□□□□ -1.03
PCM1-205ENST00000517836 GRIP2Q9C0E4 1043 aa8.64□□□□□ -1.03
PCM1-205ENST00000517836 ZBTB7CA1YPR0 619 aa8.63□□□□□ -1.03
PCM1-205ENST00000517836 M0R2N6 131 aa8.63□□□□□ -1.03
PCM1-205ENST00000517836 IL2RAP01589 272 aa8.63□□□□□ -1.03
PCM1-205ENST00000517836 GPC1P35052 558 aa8.63□□□□□ -1.03
PCM1-205ENST00000517836 GAS6Q14393 721 aa8.63□□□□□ -1.03
PCM1-205ENST00000517836 DBN1Q16643 649 aa8.63□□□□□ -1.03
PCM1-205ENST00000517836 ZNF385CQ66K41 422 aaPredicted RBP8.63□□□□□ -1.03
PCM1-205ENST00000517836 GAS2L1Q99501 681 aaPredicted RBP8.63□□□□□ -1.03
PCM1-205ENST00000517836 NBPF10Q6P3W6 841 aaKnown RBP8.62□□□□□ -1.03
PCM1-205ENST00000517836 NBPF15Q8N660 670 aa8.62□□□□□ -1.03
PCM1-205ENST00000517836 CLP1Q92989 425 aaKnown RBP8.62□□□□□ -1.03
PCM1-205ENST00000517836 CNKSR1Q969H4 720 aa8.62□□□□□ -1.03
PCM1-205ENST00000517836 ZNF837Q96EG3 531 aaPredicted RBP8.62□□□□□ -1.03
PCM1-205ENST00000517836 WASLO00401 505 aaPredicted RBP8.61□□□□□ -1.03
PCM1-205ENST00000517836 GNRH1P01148 92 aa8.61□□□□□ -1.03
PCM1-205ENST00000517836 CENPCQ03188 943 aa8.61□□□□□ -1.03
PCM1-205ENST00000517836 FAM69CQ0P6D2 419 aa8.61□□□□□ -1.03
PCM1-205ENST00000517836 AEBP1Q8IUX7 1158 aa8.61□□□□□ -1.03
PCM1-205ENST00000517836 ADAMTS8Q9UP79 889 aa8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms