RNA–Protein interactions for RNA: ENST00000517801.5

FAM49B-204, Transcript of family with sequence similarity 49 member B, humanhuman

TSL 2

Gene FAM49B, Length 791 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM49B-204ENST00000517801 SCARF1Q14162 830 aa9.68□□□□□ -0.86
FAM49B-204ENST00000517801 STK32AQ8WU08 396 aa9.68□□□□□ -0.86
FAM49B-204ENST00000517801 XAGE2Q96GT9 111 aa9.68□□□□□ -0.86
FAM49B-204ENST00000517801 ZNF358Q9NW07 568 aa9.68□□□□□ -0.86
FAM49B-204ENST00000517801 MEN1O00255 615 aa9.67□□□□□ -0.86
FAM49B-204ENST00000517801 BACH1O14867 736 aa9.67□□□□□ -0.86
FAM49B-204ENST00000517801 SPINT1O43278 529 aa9.67□□□□□ -0.86
FAM49B-204ENST00000517801 C6orf118Q5T5N4 469 aa9.67□□□□□ -0.86
FAM49B-204ENST00000517801 Q6ZNB5 142 aa9.67□□□□□ -0.86
FAM49B-204ENST00000517801 TRIM46Q7Z4K8 759 aa9.67□□□□□ -0.86
FAM49B-204ENST00000517801 CNKSR1Q969H4 720 aa9.67□□□□□ -0.86
FAM49B-204ENST00000517801 NLRP3Q96P20 1036 aa9.67□□□□□ -0.86
FAM49B-204ENST00000517801 ESYT1Q9BSJ8 1104 aa9.67□□□□□ -0.86
FAM49B-204ENST00000517801 M0R2N6 131 aa9.66□□□□□ -0.86
FAM49B-204ENST00000517801 PURBQ96QR8 312 aaKnown RBP9.66□□□□□ -0.86
FAM49B-204ENST00000517801 SERTAD1Q9UHV2 236 aa9.66□□□□□ -0.86
FAM49B-204ENST00000517801 TMEM164Q5U3C3 297 aa9.65□□□□□ -0.86
FAM49B-204ENST00000517801 KCTD17Q8N5Z5 321 aa9.65□□□□□ -0.86
FAM49B-204ENST00000517801 SLC4A9Q96Q91 983 aa9.65□□□□□ -0.86
FAM49B-204ENST00000517801 INSM2Q96T92 566 aaPredicted RBP9.65□□□□□ -0.86
FAM49B-204ENST00000517801 ATP13A2Q9NQ11 1180 aa9.65□□□□□ -0.86
FAM49B-204ENST00000517801 POLMQ9NP87 494 aaPredicted RBP9.64□□□□□ -0.87
FAM49B-204ENST00000517801 HRH3Q9Y5N1 445 aa9.64□□□□□ -0.87
FAM49B-204ENST00000517801 GPC1P35052 558 aa9.63□□□□□ -0.87
FAM49B-204ENST00000517801 SMTNP53814 917 aa9.63□□□□□ -0.87
FAM49B-204ENST00000517801 CENPCQ03188 943 aa9.63□□□□□ -0.87
FAM49B-204ENST00000517801 TLR1Q15399 786 aa9.63□□□□□ -0.87
FAM49B-204ENST00000517801 SWI5Q1ZZU3 235 aa9.63□□□□□ -0.87
FAM49B-204ENST00000517801 TSEN2Q8NCE0 465 aaKnown RBP9.63□□□□□ -0.87
FAM49B-204ENST00000517801 ZFP42Q96MM3 310 aa9.63□□□□□ -0.87
FAM49B-204ENST00000517801 DACH1Q9UI36 760 aa9.63□□□□□ -0.87
FAM49B-204ENST00000517801 TMEM88BA6NKF7 163 aa9.62□□□□□ -0.87
FAM49B-204ENST00000517801 CTSOP43234 321 aaPredicted RBP9.62□□□□□ -0.87
FAM49B-204ENST00000517801 RNF144AP50876 292 aaPredicted RBP9.61□□□□□ -0.87
FAM49B-204ENST00000517801 FAM69CQ0P6D2 419 aa9.61□□□□□ -0.87
FAM49B-204ENST00000517801 FOXD4L5Q5VV16 416 aaPredicted RBP9.61□□□□□ -0.87
FAM49B-204ENST00000517801 HINFPQ9BQA5 517 aa9.61□□□□□ -0.87
FAM49B-204ENST00000517801 FHDC1Q9C0D6 1143 aaPredicted RBP9.61□□□□□ -0.87
FAM49B-204ENST00000517801 A6NJY4 79 aa9.6□□□□□ -0.87
FAM49B-204ENST00000517801 PATL2C9JE40 543 aaKnown RBP9.6□□□□□ -0.87
FAM49B-204ENST00000517801 EPHA4P54764 986 aa9.6□□□□□ -0.87
FAM49B-204ENST00000517801 MTFR1Q15390 333 aa9.6□□□□□ -0.87
FAM49B-204ENST00000517801 B4GALNT3Q6L9W6 998 aa9.6□□□□□ -0.87
FAM49B-204ENST00000517801 TNS4Q8IZW8 715 aa9.6□□□□□ -0.87
FAM49B-204ENST00000517801 ZSCAN10Q96SZ4 725 aaPredicted RBP9.6□□□□□ -0.87
FAM49B-204ENST00000517801 SOS2Q07890 1332 aaPredicted RBP9.59□□□□□ -0.87
FAM49B-204ENST00000517801 TTLL8A6PVC2 850 aa9.59□□□□□ -0.87
FAM49B-204ENST00000517801 BRD1O95696 1058 aa9.59□□□□□ -0.87
FAM49B-204ENST00000517801 SLC27A3Q5K4L6 730 aa9.59□□□□□ -0.87
FAM49B-204ENST00000517801 CLP1Q92989 425 aaKnown RBP9.59□□□□□ -0.87
FAM49B-204ENST00000517801 GRIP2Q9C0E4 1043 aa9.59□□□□□ -0.87
FAM49B-204ENST00000517801 ZBTB7CA1YPR0 619 aa9.58□□□□□ -0.88
FAM49B-204ENST00000517801 CARNS1A5YM72 827 aa9.58□□□□□ -0.88
FAM49B-204ENST00000517801 CDK2AP1O14519 115 aa9.58□□□□□ -0.88
FAM49B-204ENST00000517801 LCE2BO14633 110 aa9.58□□□□□ -0.88
FAM49B-204ENST00000517801 GTF2E1P29083 439 aaPredicted RBP9.58□□□□□ -0.88
FAM49B-204ENST00000517801 RNF217Q8TC41 542 aa9.58□□□□□ -0.88
FAM49B-204ENST00000517801 SENP2Q9HC62 589 aa9.58□□□□□ -0.88
FAM49B-204ENST00000517801 SCHIP1Q9P0W5 487 aaPredicted RBP9.58□□□□□ -0.88
FAM49B-204ENST00000517801 LGR5O75473 907 aa9.57□□□□□ -0.88
FAM49B-204ENST00000517801 TMEM214Q6NUQ4 689 aaKnown RBP9.57□□□□□ -0.88
FAM49B-204ENST00000517801 NBPF15Q8N660 670 aa9.57□□□□□ -0.88
FAM49B-204ENST00000517801 FOXK2Q01167 660 aa9.56□□□□□ -0.88
FAM49B-204ENST00000517801 PPARGC1BQ86YN6 1023 aaKnown RBP9.56□□□□□ -0.88
FAM49B-204ENST00000517801 SLC9A9Q8IVB4 645 aa9.56□□□□□ -0.88
FAM49B-204ENST00000517801 KIFC2Q96AC6 838 aa9.56□□□□□ -0.88
FAM49B-204ENST00000517801 TSPAN10Q9H1Z9 355 aaPredicted RBP9.56□□□□□ -0.88
FAM49B-204ENST00000517801 FIGNL2A6NMB9 653 aa9.55□□□□□ -0.88
FAM49B-204ENST00000517801 KCNA1Q09470 495 aa9.55□□□□□ -0.88
FAM49B-204ENST00000517801 GNASQ5JWF2 1037 aa9.55□□□□□ -0.88
FAM49B-204ENST00000517801 LYSMD3Q7Z3D4 306 aa9.55□□□□□ -0.88
FAM49B-204ENST00000517801 GMPR2Q9P2T1 348 aaKnown RBP9.55□□□□□ -0.88
FAM49B-204ENST00000517801 IQSEC3Q9UPP2 1182 aaPredicted RBP9.55□□□□□ -0.88
FAM49B-204ENST00000517801 USP3Q9Y6I4 520 aa9.55□□□□□ -0.88
FAM49B-204ENST00000517801 PRMT3O60678 531 aa9.54□□□□□ -0.88
FAM49B-204ENST00000517801 TBCELQ5QJ74 424 aa9.54□□□□□ -0.88
FAM49B-204ENST00000517801 PRICKLE2Q7Z3G6 844 aa9.54□□□□□ -0.88
FAM49B-204ENST00000517801 GAS2L2Q8NHY3 880 aa9.54□□□□□ -0.88
FAM49B-204ENST00000517801 RHBDD1Q8TEB9 315 aa9.54□□□□□ -0.88
FAM49B-204ENST00000517801 SCG3Q8WXD2 468 aaKnown RBP9.54□□□□□ -0.88
FAM49B-204ENST00000517801 PRIMPOLQ96LW4 560 aa9.54□□□□□ -0.88
FAM49B-204ENST00000517801 SLAIN2Q9P270 581 aa9.54□□□□□ -0.88
FAM49B-204ENST00000517801 DNMT3LQ9UJW3 386 aa9.54□□□□□ -0.88
FAM49B-204ENST00000517801 SPATA31C2B4DYI2 1134 aa9.53□□□□□ -0.88
FAM49B-204ENST00000517801 MAN1A2O60476 641 aa9.53□□□□□ -0.88
FAM49B-204ENST00000517801 IGFBP4P22692 258 aa9.53□□□□□ -0.88
FAM49B-204ENST00000517801 ATP2B4P23634 1241 aa9.53□□□□□ -0.88
FAM49B-204ENST00000517801 WEE1P30291 646 aa9.53□□□□□ -0.88
FAM49B-204ENST00000517801 TRIM26Q12899 539 aaPredicted RBP9.53□□□□□ -0.88
FAM49B-204ENST00000517801 AEBP1Q8IUX7 1158 aa9.53□□□□□ -0.88
FAM49B-204ENST00000517801 TRIM47Q96LD4 638 aa9.53□□□□□ -0.88
FAM49B-204ENST00000517801 NIFKQ9BYG3 293 aaKnown RBP9.53□□□□□ -0.88
FAM49B-204ENST00000517801 CABP1Q9NZU7 370 aa9.53□□□□□ -0.88
FAM49B-204ENST00000517801 ATAD2Q6PL18 1390 aa9.52□□□□□ -0.88
FAM49B-204ENST00000517801 C21orf2O43822 256 aa9.52□□□□□ -0.89
FAM49B-204ENST00000517801 PPP1R12BO60237 982 aaPredicted RBP9.52□□□□□ -0.89
FAM49B-204ENST00000517801 PSMA6P60900 246 aaKnown RBP9.52□□□□□ -0.89
FAM49B-204ENST00000517801 OCLNQ16625 522 aa9.52□□□□□ -0.89
FAM49B-204ENST00000517801 ZNF800Q2TB10 664 aaPredicted RBP eCLIP9.52□□□□□ -0.89
FAM49B-204ENST00000517801 TAS1R3Q7RTX0 852 aa9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms