RNA–Protein interactions for RNA: ENST00000517554.1

MTCL1-204, Transcript of microtubule crosslinking factor 1, humanhuman

TSL 1 (best)

Gene MTCL1, Length 1,554 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTCL1-204ENST00000517554 SLC4A9Q96Q91 983 aa28.16■■■□□ 2.1
MTCL1-204ENST00000517554 SLC52A2Q9HAB3 445 aa28.16■■■□□ 2.1
MTCL1-204ENST00000517554 LOC102724428A0A0B4J2F2 783 aa28.15■■■□□ 2.1
MTCL1-204ENST00000517554 GNAT3A8MTJ3 354 aa28.15■■■□□ 2.1
MTCL1-204ENST00000517554 SIK1P57059 783 aa28.15■■■□□ 2.1
MTCL1-204ENST00000517554 CASZ1Q86V15 1759 aa28.13■■■□□ 2.09
MTCL1-204ENST00000517554 VIRMAQ69YN4 1812 aaKnown RBP28.13■■■□□ 2.09
MTCL1-204ENST00000517554 ITPK1Q13572 414 aa28.12■■■□□ 2.09
MTCL1-204ENST00000517554 C5P01031 1676 aa28.11■■■□□ 2.09
MTCL1-204ENST00000517554 TAF1LQ8IZX4 1826 aa28.1■■■□□ 2.09
MTCL1-204ENST00000517554 CEMIPQ8WUJ3 1361 aa28.1■■■□□ 2.09
MTCL1-204ENST00000517554 CCDC184Q52MB2 194 aa28.09■■■□□ 2.09
MTCL1-204ENST00000517554 LINC00116Q8NCU8 138 aa28.08■■■□□ 2.09
MTCL1-204ENST00000517554 ATP6V1AP38606 617 aa28.07■■■□□ 2.08
MTCL1-204ENST00000517554 SLC39A6Q13433 755 aa28.07■■■□□ 2.08
MTCL1-204ENST00000517554 PNPLA7Q6ZV29 1317 aa28.07■■■□□ 2.08
MTCL1-204ENST00000517554 RBM42Q9BTD8 480 aaKnown RBP28.07■■■□□ 2.08
MTCL1-204ENST00000517554 TUBGCP6Q96RT7 1819 aa28.07■■■□□ 2.08
MTCL1-204ENST00000517554 PTCD1O75127 700 aaKnown RBP28.06■■■□□ 2.08
MTCL1-204ENST00000517554 AMIGO3Q86WK7 504 aa28.06■■■□□ 2.08
MTCL1-204ENST00000517554 TFCP2L1Q9NZI6 479 aa28.06■■■□□ 2.08
MTCL1-204ENST00000517554 LRP5O75197 1615 aa28.06■■■□□ 2.08
MTCL1-204ENST00000517554 C4BP0C0L5 1744 aa28.05■■■□□ 2.08
MTCL1-204ENST00000517554 DCTN1Q14203 1278 aa28.05■■■□□ 2.08
MTCL1-204ENST00000517554 MCM10Q7L590 875 aa28.05■■■□□ 2.08
MTCL1-204ENST00000517554 ADAMTS8Q9UP79 889 aa28.04■■■□□ 2.08
MTCL1-204ENST00000517554 ZNF831Q5JPB2 1677 aa28.04■■■□□ 2.08
MTCL1-204ENST00000517554 SIPA1L3O60292 1781 aaPredicted RBP28.03■■■□□ 2.08
MTCL1-204ENST00000517554 QSER1Q2KHR3 1735 aa28.03■■■□□ 2.08
MTCL1-204ENST00000517554 ZBTB7AO95365 584 aa28.03■■■□□ 2.08
MTCL1-204ENST00000517554 NFE2L2Q16236 605 aa28.03■■■□□ 2.08
MTCL1-204ENST00000517554 SMIM5Q71RC9 77 aa28.03■■■□□ 2.08
MTCL1-204ENST00000517554 KCPQ6ZWJ8 1503 aa28.02■■■□□ 2.08
MTCL1-204ENST00000517554 TEFQ10587 303 aa28.02■■■□□ 2.08
MTCL1-204ENST00000517554 PNNQ9H307 717 aaKnown RBP28.01■■■□□ 2.07
MTCL1-204ENST00000517554 ANP32CO43423 234 aa28■■■□□ 2.07
MTCL1-204ENST00000517554 HTATSF1O43719 755 aaKnown RBP28■■■□□ 2.07
MTCL1-204ENST00000517554 WDR43Q15061 677 aaKnown RBP eCLIP28■■■□□ 2.07
MTCL1-204ENST00000517554 CCDC146Q8IYE0 955 aa28■■■□□ 2.07
MTCL1-204ENST00000517554 NEFMP07197 916 aa27.99■■■□□ 2.07
MTCL1-204ENST00000517554 COL23A1Q86Y22 540 aaPredicted RBP27.99■■■□□ 2.07
MTCL1-204ENST00000517554 RTF1Q92541 710 aaKnown RBP27.99■■■□□ 2.07
MTCL1-204ENST00000517554 MAPK8IP3Q9UPT6 1336 aa27.99■■■□□ 2.07
MTCL1-204ENST00000517554 DLG5Q8TDM6 1919 aa27.99■■■□□ 2.07
MTCL1-204ENST00000517554 SPON1Q9HCB6 807 aa27.98■■■□□ 2.07
MTCL1-204ENST00000517554 ATF5Q9Y2D1 282 aaPredicted RBP27.98■■■□□ 2.07
MTCL1-204ENST00000517554 COL5A3P25940 1745 aaPredicted RBP27.97■■■□□ 2.07
MTCL1-204ENST00000517554 TJP1Q07157 1748 aa27.97■■■□□ 2.07
MTCL1-204ENST00000517554 AK7Q96M32 723 aa27.97■■■□□ 2.07
MTCL1-204ENST00000517554 KCNQ3O43525 872 aa27.96■■■□□ 2.07
MTCL1-204ENST00000517554 PTGER2P43116 358 aa27.96■■■□□ 2.07
MTCL1-204ENST00000517554 CICQ96RK0 1608 aaPredicted RBP27.96■■■□□ 2.07
MTCL1-204ENST00000517554 UBR2Q8IWV8 1755 aa27.96■■■□□ 2.07
MTCL1-204ENST00000517554 UBR3Q6ZT12 1888 aa27.95■■■□□ 2.07
MTCL1-204ENST00000517554 ZNF790Q6PG37 636 aa27.95■■■□□ 2.07
MTCL1-204ENST00000517554 MTFR1LQ9H019 292 aa27.95■■■□□ 2.07
MTCL1-204ENST00000517554 HMGB2P26583 209 aaKnown RBP27.94■■■□□ 2.06
MTCL1-204ENST00000517554 TMPOP42166 694 aaKnown RBP27.94■■■□□ 2.06
MTCL1-204ENST00000517554 DNAJC10Q8IXB1 793 aa27.94■■■□□ 2.06
MTCL1-204ENST00000517554 SGIP1Q9BQI5 828 aa27.94■■■□□ 2.06
MTCL1-204ENST00000517554 THUMPD2Q9BTF0 503 aaKnown RBP27.94■■■□□ 2.06
MTCL1-204ENST00000517554 RUNDC1Q96C34 613 aa27.94■■■□□ 2.06
MTCL1-204ENST00000517554 ZNF496Q96IT1 587 aaPredicted RBP27.94■■■□□ 2.06
MTCL1-204ENST00000517554 BTBD11A6QL63 1104 aa27.93■■■□□ 2.06
MTCL1-204ENST00000517554 GNPATO15228 680 aa27.93■■■□□ 2.06
MTCL1-204ENST00000517554 RIPK4P57078 832 aa27.92■■■□□ 2.06
MTCL1-204ENST00000517554 RC3H1Q5TC82 1133 aaKnown RBP27.92■■■□□ 2.06
MTCL1-204ENST00000517554 RRP7AQ9Y3A4 280 aaKnown RBP27.92■■■□□ 2.06
MTCL1-204ENST00000517554 CNTNAP4Q9C0A0 1308 aa27.92■■■□□ 2.06
MTCL1-204ENST00000517554 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP27.91■■■□□ 2.06
MTCL1-204ENST00000517554 PHF14O94880 888 aa27.91■■■□□ 2.06
MTCL1-204ENST00000517554 SLC16A10Q8TF71 515 aa27.91■■■□□ 2.06
MTCL1-204ENST00000517554 MYH14Q7Z406 1995 aaKnown RBP27.91■■■□□ 2.06
MTCL1-204ENST00000517554 TTC5Q8N0Z6 440 aa27.9■■■□□ 2.06
MTCL1-204ENST00000517554 SSFA2P28290 1259 aa27.9■■■□□ 2.06
MTCL1-204ENST00000517554 CRKLP46109 303 aaKnown RBP27.9■■■□□ 2.06
MTCL1-204ENST00000517554 TAF7Q15545 349 aaPredicted RBP27.89■■■□□ 2.05
MTCL1-204ENST00000517554 VSIG10Q8N0Z9 540 aa27.89■■■□□ 2.05
MTCL1-204ENST00000517554 PNISRQ8TF01 805 aaKnown RBP27.89■■■□□ 2.05
MTCL1-204ENST00000517554 MIS18AQ9NYP9 233 aa27.89■■■□□ 2.05
MTCL1-204ENST00000517554 MSH5O43196 834 aa27.88■■■□□ 2.05
MTCL1-204ENST00000517554 CYP19A1P11511 503 aaPredicted RBP27.88■■■□□ 2.05
MTCL1-204ENST00000517554 INTS5Q6P9B9 1019 aaKnown RBP27.88■■■□□ 2.05
MTCL1-204ENST00000517554 FLAD1Q8NFF5 587 aa27.88■■■□□ 2.05
MTCL1-204ENST00000517554 MRS2Q9HD23 443 aa27.88■■■□□ 2.05
MTCL1-204ENST00000517554 HEG1Q9ULI3 1381 aa27.88■■■□□ 2.05
MTCL1-204ENST00000517554 RPS6KA4O75676 772 aa27.86■■■□□ 2.05
MTCL1-204ENST00000517554 NEUROD2Q15784 382 aa27.86■■■□□ 2.05
MTCL1-204ENST00000517554 COL24A1Q17RW2 1714 aa27.86■■■□□ 2.05
MTCL1-204ENST00000517554 TRIM35Q9UPQ4 493 aa27.86■■■□□ 2.05
MTCL1-204ENST00000517554 RTCBQ9Y3I0 505 aaKnown RBP27.86■■■□□ 2.05
MTCL1-204ENST00000517554 FMNL2Q96PY5 1086 aa27.84■■■□□ 2.05
MTCL1-204ENST00000517554 MSL1Q68DK7 614 aa27.83■■■□□ 2.05
MTCL1-204ENST00000517554 PRAMEF22A3QJZ6 481 aa27.82■■■□□ 2.04
MTCL1-204ENST00000517554 ARHGEF1Q92888 912 aaKnown RBP27.82■■■□□ 2.04
MTCL1-204ENST00000517554 CCDC87Q9NVE4 849 aa27.82■■■□□ 2.04
MTCL1-204ENST00000517554 APAF1O14727 1248 aa27.82■■■□□ 2.04
MTCL1-204ENST00000517554 TRAPPC3LQ5T215 181 aa27.81■■■□□ 2.04
MTCL1-204ENST00000517554 ZBTB1Q9Y2K1 713 aa27.81■■■□□ 2.04
MTCL1-204ENST00000517554 KDM3BQ7LBC6 1761 aa27.8■■■□□ 2.04
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms