RNA–Protein interactions for RNA: ENST00000517490.5

CPNE3-203, Transcript of copine 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPNE3, Length 4,865 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-203ENST00000517490 EIF2S2P20042 333 aaKnown RBP7.92□□□□□ -1.14
CPNE3-203ENST00000517490 ERC1Q8IUD2 1116 aa7.92□□□□□ -1.14
CPNE3-203ENST00000517490 TSPYL6Q8N831 410 aa7.92□□□□□ -1.14
CPNE3-203ENST00000517490 C8orf58Q8NAV2 365 aa7.92□□□□□ -1.14
CPNE3-203ENST00000517490 PIBF1Q8WXW3 757 aa7.92□□□□□ -1.14
CPNE3-203ENST00000517490 WDR70Q9NW82 654 aa7.92□□□□□ -1.14
CPNE3-203ENST00000517490 PREX2Q70Z35 1606 aa7.92□□□□□ -1.14
CPNE3-203ENST00000517490 PLEKHG5O94827 1062 aa7.92□□□□□ -1.14
CPNE3-203ENST00000517490 BRPF1P55201 1214 aaPredicted RBP7.92□□□□□ -1.14
CPNE3-203ENST00000517490 SPATA32Q96LK8 384 aa7.92□□□□□ -1.14
CPNE3-203ENST00000517490 JAKMIP1Q96N16 626 aaKnown RBP7.92□□□□□ -1.14
CPNE3-203ENST00000517490 CASTP20810 708 aaKnown RBP7.91□□□□□ -1.14
CPNE3-203ENST00000517490 RRS1Q15050 365 aaKnown RBP7.91□□□□□ -1.14
CPNE3-203ENST00000517490 MNS1Q8NEH6 495 aa7.91□□□□□ -1.14
CPNE3-203ENST00000517490 ZNF830Q96NB3 372 aaPredicted RBP7.91□□□□□ -1.14
CPNE3-203ENST00000517490 SCAND2PQ9GZW5 306 aaPredicted RBP7.91□□□□□ -1.14
CPNE3-203ENST00000517490 KIF2AO00139 706 aaPredicted RBP7.91□□□□□ -1.14
CPNE3-203ENST00000517490 CCP110O43303 1012 aa7.91□□□□□ -1.14
CPNE3-203ENST00000517490 CLEC17AQ6ZS10 378 aa7.91□□□□□ -1.14
CPNE3-203ENST00000517490 TMEM63CQ9P1W3 806 aa7.91□□□□□ -1.14
CPNE3-203ENST00000517490 KINO60870 393 aaKnown RBP7.91□□□□□ -1.14
CPNE3-203ENST00000517490 TTC12Q9H892 705 aaPredicted RBP7.91□□□□□ -1.14
CPNE3-203ENST00000517490 NEMFO60524 1076 aa7.91□□□□□ -1.14
CPNE3-203ENST00000517490 CD2BP2O95400 341 aaKnown RBP7.91□□□□□ -1.14
CPNE3-203ENST00000517490 CCDC83Q8IWF9 413 aa7.91□□□□□ -1.14
CPNE3-203ENST00000517490 MEIS3Q99687 375 aa7.91□□□□□ -1.14
CPNE3-203ENST00000517490 IL1RAPL2Q9NP60 686 aa7.91□□□□□ -1.14
CPNE3-203ENST00000517490 ABCC4O15439 1325 aa7.9□□□□□ -1.14
CPNE3-203ENST00000517490 CWC27Q6UX04 472 aaKnown RBP7.9□□□□□ -1.14
CPNE3-203ENST00000517490 KIF1BPQ96EK5 621 aa7.9□□□□□ -1.14
CPNE3-203ENST00000517490 PLEKHF1Q96S99 279 aa7.9□□□□□ -1.14
CPNE3-203ENST00000517490 PAXBP1Q9Y5B6 917 aa7.9□□□□□ -1.14
CPNE3-203ENST00000517490 MAP4K4O95819 1239 aaPredicted RBP7.9□□□□□ -1.14
CPNE3-203ENST00000517490 TNNT1P13805 278 aa7.9□□□□□ -1.14
CPNE3-203ENST00000517490 MCM10Q7L590 875 aa7.9□□□□□ -1.14
CPNE3-203ENST00000517490 KCTD17Q8N5Z5 321 aa7.9□□□□□ -1.14
CPNE3-203ENST00000517490 CCDC34Q96HJ3 373 aa7.9□□□□□ -1.14
CPNE3-203ENST00000517490 DDX19AQ9NUU7 478 aaKnown RBP7.9□□□□□ -1.14
CPNE3-203ENST00000517490 PPIP5K1Q6PFW1 1433 aa7.9□□□□□ -1.14
CPNE3-203ENST00000517490 NUTM2FA1L443 756 aa7.9□□□□□ -1.15
CPNE3-203ENST00000517490 KDM4AO75164 1064 aa7.9□□□□□ -1.15
CPNE3-203ENST00000517490 GSPT1P15170 499 aaKnown RBP7.9□□□□□ -1.15
CPNE3-203ENST00000517490 TEFQ10587 303 aa7.9□□□□□ -1.15
CPNE3-203ENST00000517490 LTV1Q96GA3 475 aaPredicted RBP7.9□□□□□ -1.15
CPNE3-203ENST00000517490 POLKQ9UBT6 870 aa7.9□□□□□ -1.15
CPNE3-203ENST00000517490 BRD1O95696 1058 aa7.9□□□□□ -1.15
CPNE3-203ENST00000517490 CAVIN2O95810 425 aa7.9□□□□□ -1.15
CPNE3-203ENST00000517490 NUTM1Q86Y26 1132 aa7.9□□□□□ -1.15
CPNE3-203ENST00000517490 GOLGA6L1Q8N7Z2 621 aa7.9□□□□□ -1.15
CPNE3-203ENST00000517490 GPT2Q8TD30 523 aa7.9□□□□□ -1.15
CPNE3-203ENST00000517490 CNPY2Q9Y2B0 182 aa7.9□□□□□ -1.15
CPNE3-203ENST00000517490 GLRX3O76003 335 aaKnown RBP7.89□□□□□ -1.15
CPNE3-203ENST00000517490 BLOC1S2Q6QNY1 142 aa7.89□□□□□ -1.15
CPNE3-203ENST00000517490 ZNF396Q96N95 335 aaPredicted RBP7.89□□□□□ -1.15
CPNE3-203ENST00000517490 SDF4Q9BRK5 362 aa7.89□□□□□ -1.15
CPNE3-203ENST00000517490 FSD1Q9BTV5 496 aa7.89□□□□□ -1.15
CPNE3-203ENST00000517490 CFAP45Q9UL16 551 aa7.89□□□□□ -1.15
CPNE3-203ENST00000517490 SRGAP3O43295 1099 aa7.89□□□□□ -1.15
CPNE3-203ENST00000517490 GIMAP6Q6P9H5 292 aa7.89□□□□□ -1.15
CPNE3-203ENST00000517490 NME9Q86XW9 330 aa7.89□□□□□ -1.15
CPNE3-203ENST00000517490 FAM200AQ8TCP9 573 aa7.89□□□□□ -1.15
CPNE3-203ENST00000517490 FEZ1Q99689 392 aa7.89□□□□□ -1.15
CPNE3-203ENST00000517490 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP7.89□□□□□ -1.15
CPNE3-203ENST00000517490 FAM83GA6ND36 823 aa7.89□□□□□ -1.15
CPNE3-203ENST00000517490 F6X3S4 739 aa7.89□□□□□ -1.15
CPNE3-203ENST00000517490 KIF20AO95235 890 aa7.89□□□□□ -1.15
CPNE3-203ENST00000517490 DDX58O95786 925 aaKnown RBP7.89□□□□□ -1.15
CPNE3-203ENST00000517490 PTPN14Q15678 1187 aa7.89□□□□□ -1.15
CPNE3-203ENST00000517490 HDGFL1Q5TGJ6 251 aa7.89□□□□□ -1.15
CPNE3-203ENST00000517490 CCDC61Q9Y6R9 512 aa7.89□□□□□ -1.15
CPNE3-203ENST00000517490 MADDQ8WXG6 1647 aa7.89□□□□□ -1.15
CPNE3-203ENST00000517490 SPDYE4A6NLX3 237 aa7.89□□□□□ -1.15
CPNE3-203ENST00000517490 F13A1P00488 732 aa7.89□□□□□ -1.15
CPNE3-203ENST00000517490 GJB2P29033 226 aa7.89□□□□□ -1.15
CPNE3-203ENST00000517490 CAMK4Q16566 473 aa7.89□□□□□ -1.15
CPNE3-203ENST00000517490 PHACTR3Q96KR7 559 aa7.89□□□□□ -1.15
CPNE3-203ENST00000517490 PPP1R1BQ9UD71 204 aaPredicted RBP7.89□□□□□ -1.15
CPNE3-203ENST00000517490 C16orf45Q96MC5 204 aaPredicted RBP7.88□□□□□ -1.15
CPNE3-203ENST00000517490 CLIP2Q9UDT6 1046 aa7.88□□□□□ -1.15
CPNE3-203ENST00000517490 ARAP3Q8WWN8 1544 aa7.88□□□□□ -1.15
CPNE3-203ENST00000517490 NEXNQ0ZGT2 675 aa7.88□□□□□ -1.15
CPNE3-203ENST00000517490 IDI1Q13907 227 aa7.88□□□□□ -1.15
CPNE3-203ENST00000517490 NUDT16Q96DE0 195 aaKnown RBP7.88□□□□□ -1.15
CPNE3-203ENST00000517490 CEP57L1Q8IYX8 460 aa7.88□□□□□ -1.15
CPNE3-203ENST00000517490 OTUD7AQ8TE49 926 aaPredicted RBP7.88□□□□□ -1.15
CPNE3-203ENST00000517490 CHMLP26374 656 aa7.87□□□□□ -1.15
CPNE3-203ENST00000517490 PRPF40BQ6NWY9 871 aaKnown RBP7.87□□□□□ -1.15
CPNE3-203ENST00000517490 KIF18AQ8NI77 898 aa7.87□□□□□ -1.15
CPNE3-203ENST00000517490 CWC15Q9P013 229 aaKnown RBP7.87□□□□□ -1.15
CPNE3-203ENST00000517490 LRRFIP2Q9Y608 721 aaKnown RBP7.87□□□□□ -1.15
CPNE3-203ENST00000517490 NCOA3Q9Y6Q9 1424 aa7.87□□□□□ -1.15
CPNE3-203ENST00000517490 EPB41L2O43491 1005 aaKnown RBP7.87□□□□□ -1.15
CPNE3-203ENST00000517490 BRD2P25440 801 aaKnown RBP7.87□□□□□ -1.15
CPNE3-203ENST00000517490 PKP1Q13835 747 aa7.87□□□□□ -1.15
CPNE3-203ENST00000517490 KRT32Q14532 448 aa7.87□□□□□ -1.15
CPNE3-203ENST00000517490 TSHZ3Q63HK5 1081 aa7.87□□□□□ -1.15
CPNE3-203ENST00000517490 PDLIM2Q96JY6 352 aa7.87□□□□□ -1.15
CPNE3-203ENST00000517490 GLI2P10070 1586 aa7.87□□□□□ -1.15
CPNE3-203ENST00000517490 MYO5CQ9NQX4 1742 aa7.87□□□□□ -1.15
CPNE3-203ENST00000517490 CTAGE5O15320 804 aa7.87□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 159.1 ms