RNA–Protein interactions for RNA: ENST00000517215.1

RNU6-1238P-201, Transcript of RNA, U6 small nuclear 1238, pseudogene, humanhuman

BASIC

Gene RNU6-1238P, Length 102 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1238P-201ENST00000517215 NUCKS1Q9H1E3 243 aaKnown RBP0.56□□□□□ -2.32
RNU6-1238P-201ENST00000517215 POLMQ9NP87 494 aaPredicted RBP0.56□□□□□ -2.32
RNU6-1238P-201ENST00000517215 PARD6AQ9NPB6 346 aa0.56□□□□□ -2.32
RNU6-1238P-201ENST00000517215 RTEL1Q9NZ71 1219 aa0.56□□□□□ -2.32
RNU6-1238P-201ENST00000517215 ANGEL1Q9UNK9 670 aaKnown RBP0.56□□□□□ -2.32
RNU6-1238P-201ENST00000517215 DYRK1BQ9Y463 629 aa0.56□□□□□ -2.32
RNU6-1238P-201ENST00000517215 EMILIN1Q9Y6C2 1016 aa0.56□□□□□ -2.32
RNU6-1238P-201ENST00000517215 SALL3Q9BXA9 1300 aa0.56□□□□□ -2.32
RNU6-1238P-201ENST00000517215 CYSRT1A8MQ03 144 aa0.55□□□□□ -2.32
RNU6-1238P-201ENST00000517215 KRTAP9-6A8MVA2 160 aa0.55□□□□□ -2.32
RNU6-1238P-201ENST00000517215 C2CD2LO14523 706 aa0.55□□□□□ -2.32
RNU6-1238P-201ENST00000517215 GRIN3BO60391 1043 aa0.55□□□□□ -2.32
RNU6-1238P-201ENST00000517215 KRT10P13645 584 aa0.55□□□□□ -2.32
RNU6-1238P-201ENST00000517215 TNFRSF1AP19438 455 aa0.55□□□□□ -2.32
RNU6-1238P-201ENST00000517215 FUT2Q10981 343 aa0.55□□□□□ -2.32
RNU6-1238P-201ENST00000517215 Q3C1V9 767 aa0.55□□□□□ -2.32
RNU6-1238P-201ENST00000517215 SPATS1Q496A3 300 aa0.55□□□□□ -2.32
RNU6-1238P-201ENST00000517215 RSPH4AQ5TD94 716 aa0.55□□□□□ -2.32
RNU6-1238P-201ENST00000517215 FOXD4L5Q5VV16 416 aaPredicted RBP0.55□□□□□ -2.32
RNU6-1238P-201ENST00000517215 MSL1Q68DK7 614 aa0.55□□□□□ -2.32
RNU6-1238P-201ENST00000517215 PTCRAQ6ISU1 281 aaPredicted RBP0.55□□□□□ -2.32
RNU6-1238P-201ENST00000517215 PAXIP1Q6ZW49 1069 aaPredicted RBP0.55□□□□□ -2.32
RNU6-1238P-201ENST00000517215 GLCCI1Q86VQ1 547 aa0.55□□□□□ -2.32
RNU6-1238P-201ENST00000517215 ZNF511Q8NB15 262 aa0.55□□□□□ -2.32
RNU6-1238P-201ENST00000517215 SPOCK2Q92563 424 aa0.55□□□□□ -2.32
RNU6-1238P-201ENST00000517215 PRDM6Q9NQX0 595 aa0.55□□□□□ -2.32
RNU6-1238P-201ENST00000517215 DLL4Q9NR61 685 aa0.55□□□□□ -2.32
RNU6-1238P-201ENST00000517215 PITPNM2Q9BZ72 1349 aa0.55□□□□□ -2.32
RNU6-1238P-201ENST00000517215 CNTNAP4Q9C0A0 1308 aa0.55□□□□□ -2.32
RNU6-1238P-201ENST00000517215 SLPIP03973 132 aa0.54□□□□□ -2.32
RNU6-1238P-201ENST00000517215 SKIP12755 728 aa0.54□□□□□ -2.32
RNU6-1238P-201ENST00000517215 PDE4AP27815 886 aa0.54□□□□□ -2.32
RNU6-1238P-201ENST00000517215 ADH6P28332 368 aa0.54□□□□□ -2.32
RNU6-1238P-201ENST00000517215 KRTAP10-11P60412 298 aa0.54□□□□□ -2.32
RNU6-1238P-201ENST00000517215 RELBQ01201 579 aa0.54□□□□□ -2.32
RNU6-1238P-201ENST00000517215 EFEMP1Q12805 493 aa0.54□□□□□ -2.32
RNU6-1238P-201ENST00000517215 ARID5BQ14865 1188 aa0.54□□□□□ -2.32
RNU6-1238P-201ENST00000517215 ERICH6BQ5W0A0 696 aa0.54□□□□□ -2.32
RNU6-1238P-201ENST00000517215 SHISA2Q6UWI4 295 aa0.54□□□□□ -2.32
RNU6-1238P-201ENST00000517215 XKR5Q6UX68 686 aa0.54□□□□□ -2.32
RNU6-1238P-201ENST00000517215 TP53INP2Q8IXH6 220 aa0.54□□□□□ -2.32
RNU6-1238P-201ENST00000517215 DDX27Q96GQ7 796 aaKnown RBP0.54□□□□□ -2.32
RNU6-1238P-201ENST00000517215 GPR20Q99678 358 aa0.54□□□□□ -2.32
RNU6-1238P-201ENST00000517215 USB1Q9BQ65 265 aaKnown RBP0.54□□□□□ -2.32
RNU6-1238P-201ENST00000517215 SCAND2PQ9GZW5 306 aaPredicted RBP0.54□□□□□ -2.32
RNU6-1238P-201ENST00000517215 ZCCHC4Q9H5U6 513 aa0.54□□□□□ -2.32
RNU6-1238P-201ENST00000517215 CDHR5Q9HBB8 845 aa0.54□□□□□ -2.32
RNU6-1238P-201ENST00000517215 USP21Q9UK80 565 aa0.54□□□□□ -2.32
RNU6-1238P-201ENST00000517215 NCKAP5LQ9HCH0 1330 aa0.54□□□□□ -2.32
RNU6-1238P-201ENST00000517215 RCCD1A6NED2 376 aa0.53□□□□□ -2.32
RNU6-1238P-201ENST00000517215 PRR19A6NJB7 356 aa0.53□□□□□ -2.32
RNU6-1238P-201ENST00000517215 STK25O00506 426 aa0.53□□□□□ -2.32
RNU6-1238P-201ENST00000517215 PRNPP04156 253 aa0.53□□□□□ -2.32
RNU6-1238P-201ENST00000517215 JUNDP17535 347 aa0.53□□□□□ -2.32
RNU6-1238P-201ENST00000517215 FSHRP23945 695 aa0.53□□□□□ -2.32
RNU6-1238P-201ENST00000517215 LINC01559Q495D7 138 aa0.53□□□□□ -2.32
RNU6-1238P-201ENST00000517215 ATG9BQ674R7 924 aa0.53□□□□□ -2.32
RNU6-1238P-201ENST00000517215 NFXL1Q6ZNB6 911 aa0.53□□□□□ -2.32
RNU6-1238P-201ENST00000517215 VSIG10LQ86VR7 867 aa0.53□□□□□ -2.32
RNU6-1238P-201ENST00000517215 FCHSD1Q86WN1 690 aa0.53□□□□□ -2.32
RNU6-1238P-201ENST00000517215 CCDC116Q8IYX3 515 aa0.53□□□□□ -2.32
RNU6-1238P-201ENST00000517215 AGBL5Q8NDL9 886 aa0.53□□□□□ -2.32
RNU6-1238P-201ENST00000517215 RBM46Q8TBY0 533 aaKnown RBP0.53□□□□□ -2.32
RNU6-1238P-201ENST00000517215 WFDC12Q8WWY7 111 aa0.53□□□□□ -2.32
RNU6-1238P-201ENST00000517215 FAM168AQ92567 244 aa0.53□□□□□ -2.32
RNU6-1238P-201ENST00000517215 MEGF10Q96KG7 1140 aa0.53□□□□□ -2.32
RNU6-1238P-201ENST00000517215 NUDT12Q9BQG2 462 aa0.53□□□□□ -2.32
RNU6-1238P-201ENST00000517215 CDCA7Q9BWT1 371 aaPredicted RBP0.53□□□□□ -2.32
RNU6-1238P-201ENST00000517215 ATXN7L1Q9ULK2 861 aaPredicted RBP0.53□□□□□ -2.32
RNU6-1238P-201ENST00000517215 A0A0A0MRY4 1105 aa0.52□□□□□ -2.33
RNU6-1238P-201ENST00000517215 ERBB2P04626 1255 aa0.52□□□□□ -2.33
RNU6-1238P-201ENST00000517215 THBS1P07996 1170 aa0.52□□□□□ -2.33
RNU6-1238P-201ENST00000517215 C1QTNF9P0C862 333 aa0.52□□□□□ -2.33
RNU6-1238P-201ENST00000517215 NID1P14543 1247 aa0.52□□□□□ -2.33
RNU6-1238P-201ENST00000517215 RHOQP17081 205 aa0.52□□□□□ -2.33
RNU6-1238P-201ENST00000517215 FGFR3P22607 806 aa0.52□□□□□ -2.33
RNU6-1238P-201ENST00000517215 NOS3P29474 1203 aa0.52□□□□□ -2.33
RNU6-1238P-201ENST00000517215 IREB2P48200 963 aaKnown RBP0.52□□□□□ -2.33
RNU6-1238P-201ENST00000517215 PRIM1P49642 420 aaKnown RBP0.52□□□□□ -2.33
RNU6-1238P-201ENST00000517215 MFSD10Q14728 455 aa0.52□□□□□ -2.33
RNU6-1238P-201ENST00000517215 BAP1Q92560 729 aa0.52□□□□□ -2.33
RNU6-1238P-201ENST00000517215 GAS2L1Q99501 681 aaPredicted RBP0.52□□□□□ -2.33
RNU6-1238P-201ENST00000517215 UNC93B1Q9H1C4 597 aa0.52□□□□□ -2.33
RNU6-1238P-201ENST00000517215 PGPEP1Q9NXJ5 209 aa0.52□□□□□ -2.33
RNU6-1238P-201ENST00000517215 CCDC39Q9UFE4 941 aa0.52□□□□□ -2.33
RNU6-1238P-201ENST00000517215 MAP4K5Q9Y4K4 846 aa0.52□□□□□ -2.33
RNU6-1238P-201ENST00000517215 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP0.51□□□□□ -2.33
RNU6-1238P-201ENST00000517215 LRRC10BA6NIK2 292 aa0.51□□□□□ -2.33
RNU6-1238P-201ENST00000517215 NPIPB6E9PJ23 425 aa0.51□□□□□ -2.33
RNU6-1238P-201ENST00000517215 M0R082 166 aa0.51□□□□□ -2.33
RNU6-1238P-201ENST00000517215 CYR61O00622 381 aa0.51□□□□□ -2.33
RNU6-1238P-201ENST00000517215 MATN3O15232 486 aa0.51□□□□□ -2.33
RNU6-1238P-201ENST00000517215 F11P03951 625 aa0.51□□□□□ -2.33
RNU6-1238P-201ENST00000517215 BMP7P18075 431 aa0.51□□□□□ -2.33
RNU6-1238P-201ENST00000517215 GDF5P43026 501 aa0.51□□□□□ -2.33
RNU6-1238P-201ENST00000517215 VASPP50552 380 aaPredicted RBP0.51□□□□□ -2.33
RNU6-1238P-201ENST00000517215 RAC1P63000 192 aa0.51□□□□□ -2.33
RNU6-1238P-201ENST00000517215 CTBSQ01459 385 aa0.51□□□□□ -2.33
RNU6-1238P-201ENST00000517215 NFIAQ12857 509 aa0.51□□□□□ -2.33
RNU6-1238P-201ENST00000517215 UBAP2LQ14157 1087 aaKnown RBP0.51□□□□□ -2.33
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms