RNA–Protein interactions for RNA: ENST00000516201.1

SCARNA5-201, small Cajal body-specific RNA 5, humanhuman

BASIC

Gene SCARNA5, Length 276 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA5-201ENST00000516201 KCPQ6ZWJ8 1503 aa8.63□□□□□ -1.03
SCARNA5-201ENST00000516201 HEG1Q9ULI3 1381 aa8.62□□□□□ -1.03
SCARNA5-201ENST00000516201 CHL1O00533 1208 aa8.62□□□□□ -1.03
SCARNA5-201ENST00000516201 FAM196AQ6ZSG2 479 aa8.62□□□□□ -1.03
SCARNA5-201ENST00000516201 MCM10Q7L590 875 aa8.62□□□□□ -1.03
SCARNA5-201ENST00000516201 LAMB4A4D0S4 1761 aa8.61□□□□□ -1.03
SCARNA5-201ENST00000516201 DCTN1Q14203 1278 aa8.61□□□□□ -1.03
SCARNA5-201ENST00000516201 CFAP44Q96MT7 982 aa8.61□□□□□ -1.03
SCARNA5-201ENST00000516201 THUMPD2Q9BTF0 503 aaKnown RBP8.61□□□□□ -1.03
SCARNA5-201ENST00000516201 TAF1LQ8IZX4 1826 aa8.6□□□□□ -1.03
SCARNA5-201ENST00000516201 E9PSI1 815 aa8.6□□□□□ -1.03
SCARNA5-201ENST00000516201 GOLGA2Q08379 1002 aa8.6□□□□□ -1.03
SCARNA5-201ENST00000516201 SLFN5Q08AF3 891 aa8.6□□□□□ -1.03
SCARNA5-201ENST00000516201 TAF7Q15545 349 aaPredicted RBP8.6□□□□□ -1.03
SCARNA5-201ENST00000516201 NEUROD2Q15784 382 aa8.6□□□□□ -1.03
SCARNA5-201ENST00000516201 PIGBQ92521 554 aa8.6□□□□□ -1.03
SCARNA5-201ENST00000516201 SPINK5Q9NQ38 1064 aaPredicted RBP8.6□□□□□ -1.03
SCARNA5-201ENST00000516201 COL5A3P25940 1745 aaPredicted RBP8.6□□□□□ -1.03
SCARNA5-201ENST00000516201 TJP1Q07157 1748 aa8.6□□□□□ -1.03
SCARNA5-201ENST00000516201 RREB1Q92766 1687 aa8.59□□□□□ -1.03
SCARNA5-201ENST00000516201 SOS1Q07889 1333 aaPredicted RBP8.59□□□□□ -1.03
SCARNA5-201ENST00000516201 A0A0G2JS52 829 aa8.59□□□□□ -1.03
SCARNA5-201ENST00000516201 PRIM1P49642 420 aaKnown RBP8.59□□□□□ -1.03
SCARNA5-201ENST00000516201 GNAI1P63096 354 aa8.59□□□□□ -1.03
SCARNA5-201ENST00000516201 MYT1Q01538 1121 aa8.59□□□□□ -1.03
SCARNA5-201ENST00000516201 TEFQ10587 303 aa8.59□□□□□ -1.03
SCARNA5-201ENST00000516201 DUSP27Q5VZP5 1158 aa8.59□□□□□ -1.03
SCARNA5-201ENST00000516201 BCL11BQ9C0K0 894 aaPredicted RBP8.59□□□□□ -1.03
SCARNA5-201ENST00000516201 C5P01031 1676 aa8.59□□□□□ -1.03
SCARNA5-201ENST00000516201 MYH14Q7Z406 1995 aaKnown RBP8.59□□□□□ -1.03
SCARNA5-201ENST00000516201 FANCIQ9NVI1 1328 aa8.58□□□□□ -1.04
SCARNA5-201ENST00000516201 CABP4P57796 275 aa8.58□□□□□ -1.04
SCARNA5-201ENST00000516201 ZNF790Q6PG37 636 aa8.58□□□□□ -1.04
SCARNA5-201ENST00000516201 NFATC2IPQ8NCF5 419 aa8.58□□□□□ -1.04
SCARNA5-201ENST00000516201 MYH16Q9H6N6 1097 aa8.58□□□□□ -1.04
SCARNA5-201ENST00000516201 MBIPQ9NS73 344 aa8.58□□□□□ -1.04
SCARNA5-201ENST00000516201 TMOD3Q9NYL9 352 aa8.58□□□□□ -1.04
SCARNA5-201ENST00000516201 KCNQ2O43526 872 aa8.57□□□□□ -1.04
SCARNA5-201ENST00000516201 HOXB7P09629 217 aa8.57□□□□□ -1.04
SCARNA5-201ENST00000516201 EIF4A1P60842 406 aaKnown RBP8.57□□□□□ -1.04
SCARNA5-201ENST00000516201 SMARCC1Q92922 1105 aaPredicted RBP8.57□□□□□ -1.04
SCARNA5-201ENST00000516201 ATG3Q9NT62 314 aa8.57□□□□□ -1.04
SCARNA5-201ENST00000516201 BTBD11A6QL63 1104 aa8.56□□□□□ -1.04
SCARNA5-201ENST00000516201 CT47B1P0C2W7 299 aaPredicted RBP8.56□□□□□ -1.04
SCARNA5-201ENST00000516201 FAM182BQ5T319 152 aa8.56□□□□□ -1.04
SCARNA5-201ENST00000516201 PTF1AQ7RTS3 328 aa8.56□□□□□ -1.04
SCARNA5-201ENST00000516201 VSIG10Q8N0Z9 540 aa8.56□□□□□ -1.04
SCARNA5-201ENST00000516201 CDCA7LQ96GN5 454 aa8.56□□□□□ -1.04
SCARNA5-201ENST00000516201 ACSBG1Q96GR2 724 aa8.56□□□□□ -1.04
SCARNA5-201ENST00000516201 TSPYL4Q9UJ04 414 aa8.56□□□□□ -1.04
SCARNA5-201ENST00000516201 ASAP1Q9ULH1 1129 aa8.56□□□□□ -1.04
SCARNA5-201ENST00000516201 SALL2Q9Y467 1007 aaPredicted RBP8.56□□□□□ -1.04
SCARNA5-201ENST00000516201 PALLDQ8WX93 1383 aa8.56□□□□□ -1.04
SCARNA5-201ENST00000516201 SENP3-EIF4A1A0A087X0R7 540 aa8.55□□□□□ -1.04
SCARNA5-201ENST00000516201 PLSCR1O15162 318 aa8.55□□□□□ -1.04
SCARNA5-201ENST00000516201 KCNQ3O43525 872 aa8.55□□□□□ -1.04
SCARNA5-201ENST00000516201 ZNF496Q96IT1 587 aaPredicted RBP8.55□□□□□ -1.04
SCARNA5-201ENST00000516201 QSER1Q2KHR3 1735 aa8.54□□□□□ -1.04
SCARNA5-201ENST00000516201 GIGYF1O75420 1035 aaPredicted RBP8.54□□□□□ -1.04
SCARNA5-201ENST00000516201 SLC39A6Q13433 755 aa8.54□□□□□ -1.04
SCARNA5-201ENST00000516201 CCDC125Q86Z20 511 aa8.54□□□□□ -1.04
SCARNA5-201ENST00000516201 TSR2Q969E8 191 aaKnown RBP8.54□□□□□ -1.04
SCARNA5-201ENST00000516201 ZNF428Q96B54 188 aa8.54□□□□□ -1.04
SCARNA5-201ENST00000516201 FMNL2Q96PY5 1086 aa8.54□□□□□ -1.04
SCARNA5-201ENST00000516201 SLC4A9Q96Q91 983 aa8.54□□□□□ -1.04
SCARNA5-201ENST00000516201 NUP188Q5SRE5 1749 aa8.54□□□□□ -1.04
SCARNA5-201ENST00000516201 ERBB4Q15303 1308 aa8.54□□□□□ -1.04
SCARNA5-201ENST00000516201 UBR3Q6ZT12 1888 aa8.53□□□□□ -1.04
SCARNA5-201ENST00000516201 LOC102724428A0A0B4J2F2 783 aa8.53□□□□□ -1.04
SCARNA5-201ENST00000516201 TRIM37O94972 964 aa8.53□□□□□ -1.04
SCARNA5-201ENST00000516201 SIK1P57059 783 aa8.53□□□□□ -1.04
SCARNA5-201ENST00000516201 SLC27A3Q5K4L6 730 aa8.53□□□□□ -1.04
SCARNA5-201ENST00000516201 TTC5Q8N0Z6 440 aa8.53□□□□□ -1.04
SCARNA5-201ENST00000516201 MIS18AQ9NYP9 233 aa8.53□□□□□ -1.04
SCARNA5-201ENST00000516201 TUBGCP6Q96RT7 1819 aa8.52□□□□□ -1.04
SCARNA5-201ENST00000516201 C4BP0C0L5 1744 aa8.52□□□□□ -1.05
SCARNA5-201ENST00000516201 VAMP4O75379 141 aa8.52□□□□□ -1.05
SCARNA5-201ENST00000516201 SNRPA1P09661 255 aaKnown RBP8.52□□□□□ -1.05
SCARNA5-201ENST00000516201 BRPF1P55201 1214 aaPredicted RBP8.52□□□□□ -1.05
SCARNA5-201ENST00000516201 KRT24Q2M2I5 525 aa8.52□□□□□ -1.05
SCARNA5-201ENST00000516201 TSPYL6Q8N831 410 aa8.52□□□□□ -1.05
SCARNA5-201ENST00000516201 C8orf58Q8NAV2 365 aa8.52□□□□□ -1.05
SCARNA5-201ENST00000516201 SYTL4Q96C24 671 aaPredicted RBP8.52□□□□□ -1.05
SCARNA5-201ENST00000516201 YTHDC1Q96MU7 727 aaKnown RBP8.52□□□□□ -1.05
SCARNA5-201ENST00000516201 N4BP2Q86UW6 1770 aaPredicted RBP8.52□□□□□ -1.05
SCARNA5-201ENST00000516201 CNTNAP4Q9C0A0 1308 aa8.52□□□□□ -1.05
SCARNA5-201ENST00000516201 HMGB2P26583 209 aaKnown RBP8.51□□□□□ -1.05
SCARNA5-201ENST00000516201 EXOSC9Q06265 439 aaKnown RBP8.51□□□□□ -1.05
SCARNA5-201ENST00000516201 LRP10Q7Z4F1 713 aa8.51□□□□□ -1.05
SCARNA5-201ENST00000516201 PROM2Q8N271 834 aa8.51□□□□□ -1.05
SCARNA5-201ENST00000516201 CAMKK2Q96RR4 588 aa8.51□□□□□ -1.05
SCARNA5-201ENST00000516201 TEX13AQ9BXU3 409 aaPredicted RBP8.51□□□□□ -1.05
SCARNA5-201ENST00000516201 CHMP4AQ9BY43 222 aa8.51□□□□□ -1.05
SCARNA5-201ENST00000516201 LAS1LQ9Y4W2 734 aaKnown RBP8.51□□□□□ -1.05
SCARNA5-201ENST00000516201 CYP19A1P11511 503 aaPredicted RBP8.5□□□□□ -1.05
SCARNA5-201ENST00000516201 ITPK1Q13572 414 aa8.5□□□□□ -1.05
SCARNA5-201ENST00000516201 TWISTNBQ3B726 338 aaPredicted RBP8.5□□□□□ -1.05
SCARNA5-201ENST00000516201 ALDH1L2Q3SY69 923 aa8.5□□□□□ -1.05
SCARNA5-201ENST00000516201 RC3H1Q5TC82 1133 aaKnown RBP8.5□□□□□ -1.05
SCARNA5-201ENST00000516201 ILDR2Q71H61 639 aa8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms