RNA–Protein interactions for RNA: ENST00000515939.1

RNU4ATAC11P-201, Transcript of RNA, U4atac small nuclear 11, pseudogene, humanhuman

BASIC

Gene RNU4ATAC11P, Length 126 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4ATAC11P-201ENST00000515939 DDR1Q08345 913 aa1.78□□□□□ -2.12
RNU4ATAC11P-201ENST00000515939 SLC27A3Q5K4L6 730 aa1.78□□□□□ -2.12
RNU4ATAC11P-201ENST00000515939 C9orf131Q5VYM1 1079 aa1.78□□□□□ -2.12
RNU4ATAC11P-201ENST00000515939 RBM46Q8TBY0 533 aaKnown RBP1.78□□□□□ -2.12
RNU4ATAC11P-201ENST00000515939 DDX54Q8TDD1 881 aaKnown RBP1.78□□□□□ -2.12
RNU4ATAC11P-201ENST00000515939 ANKRD24Q8TF21 1146 aa1.78□□□□□ -2.12
RNU4ATAC11P-201ENST00000515939 PIGBQ92521 554 aa1.78□□□□□ -2.12
RNU4ATAC11P-201ENST00000515939 IP6K1Q92551 441 aa1.78□□□□□ -2.12
RNU4ATAC11P-201ENST00000515939 DCAF5Q96JK2 942 aa1.78□□□□□ -2.12
RNU4ATAC11P-201ENST00000515939 CDCA7Q9BWT1 371 aaPredicted RBP1.78□□□□□ -2.12
RNU4ATAC11P-201ENST00000515939 SLC12A5Q9H2X9 1139 aa1.78□□□□□ -2.12
RNU4ATAC11P-201ENST00000515939 BCL2L12Q9HB09 334 aa1.78□□□□□ -2.12
RNU4ATAC11P-201ENST00000515939 NLRP2Q9NX02 1062 aa1.78□□□□□ -2.12
RNU4ATAC11P-201ENST00000515939 TFCP2L1Q9NZI6 479 aa1.78□□□□□ -2.12
RNU4ATAC11P-201ENST00000515939 CCNL1Q9UK58 526 aaPredicted RBP1.78□□□□□ -2.12
RNU4ATAC11P-201ENST00000515939 ASAP1Q9ULH1 1129 aa1.78□□□□□ -2.12
RNU4ATAC11P-201ENST00000515939 VCANP13611 3396 aa1.78□□□□□ -2.12
RNU4ATAC11P-201ENST00000515939 LAMA2P24043 3122 aaKnown RBP1.78□□□□□ -2.12
RNU4ATAC11P-201ENST00000515939 TTC28Q96AY4 2481 aa1.78□□□□□ -2.12
RNU4ATAC11P-201ENST00000515939 UNC80Q8N2C7 3258 aa1.78□□□□□ -2.13
RNU4ATAC11P-201ENST00000515939 PRUNE2Q8WUY3 3088 aa1.77□□□□□ -2.13
RNU4ATAC11P-201ENST00000515939 SCN4AP35499 1836 aa1.77□□□□□ -2.13
RNU4ATAC11P-201ENST00000515939 KIF20BQ96Q89 1820 aa1.77□□□□□ -2.13
RNU4ATAC11P-201ENST00000515939 SIPA1L3O60292 1781 aaPredicted RBP1.77□□□□□ -2.13
RNU4ATAC11P-201ENST00000515939 A0A1W2PP64 1363 aa1.77□□□□□ -2.13
RNU4ATAC11P-201ENST00000515939 CARMIL3Q8ND23 1372 aa1.77□□□□□ -2.13
RNU4ATAC11P-201ENST00000515939 PALLDQ8WX93 1383 aa1.77□□□□□ -2.13
RNU4ATAC11P-201ENST00000515939 PASKQ96RG2 1323 aa1.77□□□□□ -2.13
RNU4ATAC11P-201ENST00000515939 CENPJQ9HC77 1338 aaPredicted RBP1.77□□□□□ -2.13
RNU4ATAC11P-201ENST00000515939 NFKBIEO00221 500 aa1.77□□□□□ -2.13
RNU4ATAC11P-201ENST00000515939 ITGBL1O95965 494 aaPredicted RBP1.77□□□□□ -2.13
RNU4ATAC11P-201ENST00000515939 MMP10P09238 476 aa1.77□□□□□ -2.13
RNU4ATAC11P-201ENST00000515939 GYS1P13807 737 aa1.77□□□□□ -2.13
RNU4ATAC11P-201ENST00000515939 POLD1P28340 1107 aa1.77□□□□□ -2.13
RNU4ATAC11P-201ENST00000515939 TM4SF1P30408 202 aa1.77□□□□□ -2.13
RNU4ATAC11P-201ENST00000515939 HOXC9P31274 260 aa1.77□□□□□ -2.13
RNU4ATAC11P-201ENST00000515939 SRPK2P78362 688 aaKnown RBP1.77□□□□□ -2.13
RNU4ATAC11P-201ENST00000515939 RASSF7Q02833 373 aa1.77□□□□□ -2.13
RNU4ATAC11P-201ENST00000515939 FKBP8Q14318 412 aa1.77□□□□□ -2.13
RNU4ATAC11P-201ENST00000515939 NKX1-1Q15270 411 aaPredicted RBP1.77□□□□□ -2.13
RNU4ATAC11P-201ENST00000515939 FAM161AQ3B820 660 aa1.77□□□□□ -2.13
RNU4ATAC11P-201ENST00000515939 SUGP2Q8IX01 1082 aaKnown RBP eCLIP1.77□□□□□ -2.13
RNU4ATAC11P-201ENST00000515939 ZCRB1Q8TBF4 217 aaKnown RBP1.77□□□□□ -2.13
RNU4ATAC11P-201ENST00000515939 ARHGEF1Q92888 912 aaKnown RBP1.77□□□□□ -2.13
RNU4ATAC11P-201ENST00000515939 L3MBTL2Q969R5 705 aa1.77□□□□□ -2.13
RNU4ATAC11P-201ENST00000515939 LTV1Q96GA3 475 aaPredicted RBP1.77□□□□□ -2.13
RNU4ATAC11P-201ENST00000515939 SIN3AQ96ST3 1273 aa1.77□□□□□ -2.13
RNU4ATAC11P-201ENST00000515939 ZIC5Q96T25 663 aa1.77□□□□□ -2.13
RNU4ATAC11P-201ENST00000515939 ATG3Q9NT62 314 aa1.77□□□□□ -2.13
RNU4ATAC11P-201ENST00000515939 SRP68Q9UHB9 627 aaKnown RBP1.77□□□□□ -2.13
RNU4ATAC11P-201ENST00000515939 AKAP11Q9UKA4 1901 aa1.77□□□□□ -2.13
RNU4ATAC11P-201ENST00000515939 UBR2Q8IWV8 1755 aa1.77□□□□□ -2.13
RNU4ATAC11P-201ENST00000515939 DOCK3Q8IZD9 2030 aa1.76□□□□□ -2.13
RNU4ATAC11P-201ENST00000515939 EYSQ5T1H1 3165 aa1.76□□□□□ -2.13
RNU4ATAC11P-201ENST00000515939 SNED1Q8TER0 1413 aa1.76□□□□□ -2.13
RNU4ATAC11P-201ENST00000515939 SPTBN5Q9NRC6 3674 aaKnown RBP1.76□□□□□ -2.13
RNU4ATAC11P-201ENST00000515939 SCN9AQ15858 1988 aa1.76□□□□□ -2.13
RNU4ATAC11P-201ENST00000515939 KTN1Q86UP2 1357 aaKnown RBP1.76□□□□□ -2.13
RNU4ATAC11P-201ENST00000515939 TTC21AQ8NDW8 1320 aa1.76□□□□□ -2.13
RNU4ATAC11P-201ENST00000515939 ZNF646O15015 1829 aaPredicted RBP1.76□□□□□ -2.13
RNU4ATAC11P-201ENST00000515939 NUP98P52948 1817 aa1.76□□□□□ -2.13
RNU4ATAC11P-201ENST00000515939 LOC102724428A0A0B4J2F2 783 aa1.76□□□□□ -2.13
RNU4ATAC11P-201ENST00000515939 FYB1O15117 783 aa1.76□□□□□ -2.13
RNU4ATAC11P-201ENST00000515939 PHF14O94880 888 aa1.76□□□□□ -2.13
RNU4ATAC11P-201ENST00000515939 CSB-PGBD3P0DP91 1061 aa1.76□□□□□ -2.13
RNU4ATAC11P-201ENST00000515939 HSPA8P11142 646 aaKnown RBP1.76□□□□□ -2.13
RNU4ATAC11P-201ENST00000515939 VEGFBP49765 207 aa1.76□□□□□ -2.13
RNU4ATAC11P-201ENST00000515939 LBX1P52954 281 aa1.76□□□□□ -2.13
RNU4ATAC11P-201ENST00000515939 SIK1P57059 783 aa1.76□□□□□ -2.13
RNU4ATAC11P-201ENST00000515939 FSTL1Q12841 308 aa1.76□□□□□ -2.13
RNU4ATAC11P-201ENST00000515939 RRS1Q15050 365 aaKnown RBP1.76□□□□□ -2.13
RNU4ATAC11P-201ENST00000515939 HSP90AB2PQ58FF8 381 aa1.76□□□□□ -2.13
RNU4ATAC11P-201ENST00000515939 INTS5Q6P9B9 1019 aaKnown RBP1.76□□□□□ -2.13
RNU4ATAC11P-201ENST00000515939 OLFM4Q6UX06 510 aa1.76□□□□□ -2.13
RNU4ATAC11P-201ENST00000515939 DLK2Q6UY11 383 aa1.76□□□□□ -2.13
RNU4ATAC11P-201ENST00000515939 MPRIPQ6WCQ1 1025 aa1.76□□□□□ -2.13
RNU4ATAC11P-201ENST00000515939 ARHGAP27Q6ZUM4 889 aa1.76□□□□□ -2.13
RNU4ATAC11P-201ENST00000515939 KCNH5Q8NCM2 988 aa1.76□□□□□ -2.13
RNU4ATAC11P-201ENST00000515939 SYTL4Q96C24 671 aaPredicted RBP1.76□□□□□ -2.13
RNU4ATAC11P-201ENST00000515939 ABHD8Q96I13 439 aa1.76□□□□□ -2.13
RNU4ATAC11P-201ENST00000515939 TESK2Q96S53 571 aa1.76□□□□□ -2.13
RNU4ATAC11P-201ENST00000515939 CARD14Q9BXL6 1004 aa1.76□□□□□ -2.13
RNU4ATAC11P-201ENST00000515939 WBP1LQ9NX94 342 aa1.76□□□□□ -2.13
RNU4ATAC11P-201ENST00000515939 BCS1LQ9Y276 419 aa1.76□□□□□ -2.13
RNU4ATAC11P-201ENST00000515939 MYO9BQ13459 2157 aa1.76□□□□□ -2.13
RNU4ATAC11P-201ENST00000515939 COL4A1P02462 1669 aa1.76□□□□□ -2.13
RNU4ATAC11P-201ENST00000515939 LAMB2P55268 1798 aa1.75□□□□□ -2.13
RNU4ATAC11P-201ENST00000515939 BCORQ6W2J9 1755 aa1.75□□□□□ -2.13
RNU4ATAC11P-201ENST00000515939 KDM3BQ7LBC6 1761 aa1.75□□□□□ -2.13
RNU4ATAC11P-201ENST00000515939 CNTNAP1P78357 1384 aa1.75□□□□□ -2.13
RNU4ATAC11P-201ENST00000515939 USP47Q96K76 1375 aa1.75□□□□□ -2.13
RNU4ATAC11P-201ENST00000515939 MUC3AQ02505 3323 aa1.75□□□□□ -2.13
RNU4ATAC11P-201ENST00000515939 GLTPD2A6NH11 291 aa1.75□□□□□ -2.13
RNU4ATAC11P-201ENST00000515939 POLRMTO00411 1230 aaKnown RBP1.75□□□□□ -2.13
RNU4ATAC11P-201ENST00000515939 GNPATO15228 680 aa1.75□□□□□ -2.13
RNU4ATAC11P-201ENST00000515939 MSH5O43196 834 aa1.75□□□□□ -2.13
RNU4ATAC11P-201ENST00000515939 FCHSD2O94868 740 aa1.75□□□□□ -2.13
RNU4ATAC11P-201ENST00000515939 SSFA2P28290 1259 aa1.75□□□□□ -2.13
RNU4ATAC11P-201ENST00000515939 TGFB2P61812 414 aa1.75□□□□□ -2.13
RNU4ATAC11P-201ENST00000515939 CCDC24Q8N4L8 307 aa1.75□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms