RNA–Protein interactions for RNA: ENST00000515835.2

PDE4D-225, Transcript of phosphodiesterase 4D, humanhuman

TSL 4 BASIC

Gene PDE4D, Length 590 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4D-225ENST00000515835 USP17L17D6RBQ6 530 aa11.01□□□□□ -0.65
PDE4D-225ENST00000515835 USP17L19D6RCP7 530 aa11.01□□□□□ -0.65
PDE4D-225ENST00000515835 USP17L20D6RJB6 530 aa11.01□□□□□ -0.65
PDE4D-225ENST00000515835 ATG7O95352 703 aa11.01□□□□□ -0.65
PDE4D-225ENST00000515835 SCNN1DP51172 638 aa11.01□□□□□ -0.65
PDE4D-225ENST00000515835 USP17L24Q0WX57 530 aa11.01□□□□□ -0.65
PDE4D-225ENST00000515835 PTK7Q13308 1070 aa11.01□□□□□ -0.65
PDE4D-225ENST00000515835 CRTC2Q53ET0 693 aaPredicted RBP11.01□□□□□ -0.65
PDE4D-225ENST00000515835 CDCA8Q53HL2 280 aa11.01□□□□□ -0.65
PDE4D-225ENST00000515835 C6orf118Q5T5N4 469 aa11.01□□□□□ -0.65
PDE4D-225ENST00000515835 PURBQ96QR8 312 aaKnown RBP11.01□□□□□ -0.65
PDE4D-225ENST00000515835 ETNK1Q9HBU6 452 aa11.01□□□□□ -0.65
PDE4D-225ENST00000515835 KIAA1024Q9UPX6 916 aa11.01□□□□□ -0.65
PDE4D-225ENST00000515835 INHAP05111 366 aa11□□□□□ -0.65
PDE4D-225ENST00000515835 GDF10P55107 478 aa11□□□□□ -0.65
PDE4D-225ENST00000515835 CCDC102BQ68D86 513 aa11□□□□□ -0.65
PDE4D-225ENST00000515835 XAGE2Q96GT9 111 aa11□□□□□ -0.65
PDE4D-225ENST00000515835 ZNF594Q96JF6 807 aaPredicted RBP11□□□□□ -0.65
PDE4D-225ENST00000515835 TMEM229AB2RXF0 380 aa10.99□□□□□ -0.65
PDE4D-225ENST00000515835 IL2RAP01589 272 aa10.99□□□□□ -0.65
PDE4D-225ENST00000515835 ELOAQ14241 798 aaKnown RBP10.99□□□□□ -0.65
PDE4D-225ENST00000515835 TPCN2Q8NHX9 752 aa10.99□□□□□ -0.65
PDE4D-225ENST00000515835 ZFP42Q96MM3 310 aa10.99□□□□□ -0.65
PDE4D-225ENST00000515835 INSM2Q96T92 566 aaPredicted RBP10.99□□□□□ -0.65
PDE4D-225ENST00000515835 ESYT1Q9BSJ8 1104 aa10.99□□□□□ -0.65
PDE4D-225ENST00000515835 RAB6BQ9NRW1 208 aa10.99□□□□□ -0.65
PDE4D-225ENST00000515835 RBM19Q9Y4C8 960 aaKnown RBP10.99□□□□□ -0.65
PDE4D-225ENST00000515835 CFTRP13569 1480 aa10.99□□□□□ -0.65
PDE4D-225ENST00000515835 TOP2AP11388 1531 aaKnown RBP10.99□□□□□ -0.65
PDE4D-225ENST00000515835 MEN1O00255 615 aa10.98□□□□□ -0.65
PDE4D-225ENST00000515835 DKK1O94907 266 aa10.98□□□□□ -0.65
PDE4D-225ENST00000515835 ANKMY2Q8IV38 441 aa10.98□□□□□ -0.65
PDE4D-225ENST00000515835 CNKSR1Q969H4 720 aa10.98□□□□□ -0.65
PDE4D-225ENST00000515835 NLRP3Q96P20 1036 aa10.98□□□□□ -0.65
PDE4D-225ENST00000515835 SENP2Q9HC62 589 aa10.98□□□□□ -0.65
PDE4D-225ENST00000515835 MRC2Q9UBG0 1479 aa10.98□□□□□ -0.65
PDE4D-225ENST00000515835 STAU1O95793 577 aaKnown RBP10.97□□□□□ -0.65
PDE4D-225ENST00000515835 GPC1P35052 558 aa10.97□□□□□ -0.65
PDE4D-225ENST00000515835 HRH3Q9Y5N1 445 aa10.97□□□□□ -0.65
PDE4D-225ENST00000515835 ACIN1Q9UKV3 1341 aaKnown RBP10.97□□□□□ -0.65
PDE4D-225ENST00000515835 KIF21AQ7Z4S6 1674 aa10.96□□□□□ -0.65
PDE4D-225ENST00000515835 BACH1O14867 736 aa10.96□□□□□ -0.65
PDE4D-225ENST00000515835 RNF144AP50876 292 aaPredicted RBP10.96□□□□□ -0.65
PDE4D-225ENST00000515835 KIFC2Q96AC6 838 aa10.96□□□□□ -0.65
PDE4D-225ENST00000515835 SLC4A9Q96Q91 983 aa10.96□□□□□ -0.65
PDE4D-225ENST00000515835 POLMQ9NP87 494 aaPredicted RBP10.96□□□□□ -0.65
PDE4D-225ENST00000515835 NOVA2Q9UNW9 492 aaKnown RBP10.96□□□□□ -0.65
PDE4D-225ENST00000515835 CEP164Q9UPV0 1460 aa10.95□□□□□ -0.66
PDE4D-225ENST00000515835 SOS2Q07890 1332 aaPredicted RBP10.95□□□□□ -0.66
PDE4D-225ENST00000515835 M0R2N6 131 aa10.95□□□□□ -0.66
PDE4D-225ENST00000515835 CTSOP43234 321 aaPredicted RBP10.95□□□□□ -0.66
PDE4D-225ENST00000515835 SEC13P55735 322 aa10.95□□□□□ -0.66
PDE4D-225ENST00000515835 DPYDQ12882 1025 aa10.95□□□□□ -0.66
PDE4D-225ENST00000515835 SERBP1Q8NC51 408 aaKnown RBP eCLIP10.95□□□□□ -0.66
PDE4D-225ENST00000515835 ARXQ96QS3 562 aa10.95□□□□□ -0.66
PDE4D-225ENST00000515835 ZNF358Q9NW07 568 aa10.95□□□□□ -0.66
PDE4D-225ENST00000515835 WDR62O43379 1518 aa10.94□□□□□ -0.66
PDE4D-225ENST00000515835 FANCD2Q9BXW9 1451 aa10.94□□□□□ -0.66
PDE4D-225ENST00000515835 TTLL8A6PVC2 850 aa10.94□□□□□ -0.66
PDE4D-225ENST00000515835 CENPCQ03188 943 aa10.94□□□□□ -0.66
PDE4D-225ENST00000515835 FAM200AQ8TCP9 573 aa10.94□□□□□ -0.66
PDE4D-225ENST00000515835 GMPR2Q9P2T1 348 aaKnown RBP10.94□□□□□ -0.66
PDE4D-225ENST00000515835 FOXD4L5Q5VV16 416 aaPredicted RBP10.93□□□□□ -0.66
PDE4D-225ENST00000515835 TRIM47Q96LD4 638 aa10.93□□□□□ -0.66
PDE4D-225ENST00000515835 SERTAD1Q9UHV2 236 aa10.93□□□□□ -0.66
PDE4D-225ENST00000515835 SFI1A8K8P3 1242 aa10.92□□□□□ -0.66
PDE4D-225ENST00000515835 SMTNP53814 917 aa10.92□□□□□ -0.66
PDE4D-225ENST00000515835 RNF217Q8TC41 542 aa10.92□□□□□ -0.66
PDE4D-225ENST00000515835 FHDC1Q9C0D6 1143 aaPredicted RBP10.92□□□□□ -0.66
PDE4D-225ENST00000515835 GRIP2Q9C0E4 1043 aa10.92□□□□□ -0.66
PDE4D-225ENST00000515835 ZMIZ1Q9ULJ6 1067 aa10.92□□□□□ -0.66
PDE4D-225ENST00000515835 MTFR1Q15390 333 aa10.91□□□□□ -0.66
PDE4D-225ENST00000515835 TLR1Q15399 786 aa10.91□□□□□ -0.66
PDE4D-225ENST00000515835 A6NJY4 79 aa10.9□□□□□ -0.66
PDE4D-225ENST00000515835 SLC27A3Q5K4L6 730 aa10.9□□□□□ -0.66
PDE4D-225ENST00000515835 ZSCAN10Q96SZ4 725 aaPredicted RBP10.89□□□□□ -0.67
PDE4D-225ENST00000515835 CDK2AP1O14519 115 aa10.88□□□□□ -0.67
PDE4D-225ENST00000515835 MAN1A2O60476 641 aa10.88□□□□□ -0.67
PDE4D-225ENST00000515835 CSB-PGBD3P0DP91 1061 aa10.88□□□□□ -0.67
PDE4D-225ENST00000515835 GTF2E1P29083 439 aaPredicted RBP10.88□□□□□ -0.67
PDE4D-225ENST00000515835 EPHA4P54764 986 aa10.88□□□□□ -0.67
PDE4D-225ENST00000515835 LYSMD3Q7Z3D4 306 aa10.88□□□□□ -0.67
PDE4D-225ENST00000515835 PPARGC1BQ86YN6 1023 aaKnown RBP10.88□□□□□ -0.67
PDE4D-225ENST00000515835 TSEN2Q8NCE0 465 aaKnown RBP10.88□□□□□ -0.67
PDE4D-225ENST00000515835 STK32AQ8WU08 396 aa10.88□□□□□ -0.67
PDE4D-225ENST00000515835 DNMT3LQ9UJW3 386 aa10.88□□□□□ -0.67
PDE4D-225ENST00000515835 SPATA31C2B4DYI2 1134 aa10.87□□□□□ -0.67
PDE4D-225ENST00000515835 C11orf95C9JLR9 678 aaPredicted RBP10.87□□□□□ -0.67
PDE4D-225ENST00000515835 SWI5Q1ZZU3 235 aa10.87□□□□□ -0.67
PDE4D-225ENST00000515835 ZNF800Q2TB10 664 aaPredicted RBP eCLIP10.87□□□□□ -0.67
PDE4D-225ENST00000515835 TNS4Q8IZW8 715 aa10.87□□□□□ -0.67
PDE4D-225ENST00000515835 SCHIP1Q9P0W5 487 aaPredicted RBP10.87□□□□□ -0.67
PDE4D-225ENST00000515835 FIGNL2A6NMB9 653 aa10.86□□□□□ -0.67
PDE4D-225ENST00000515835 FOXK2Q01167 660 aa10.86□□□□□ -0.67
PDE4D-225ENST00000515835 TMEM164Q5U3C3 297 aa10.86□□□□□ -0.67
PDE4D-225ENST00000515835 TMEM214Q6NUQ4 689 aaKnown RBP10.86□□□□□ -0.67
PDE4D-225ENST00000515835 NBPF15Q8N660 670 aa10.86□□□□□ -0.67
PDE4D-225ENST00000515835 CCDC88BA6NC98 1476 aa10.86□□□□□ -0.67
PDE4D-225ENST00000515835 SNRPBP14678 240 aaKnown RBP10.85□□□□□ -0.67
PDE4D-225ENST00000515835 FAM69CQ0P6D2 419 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms