RNA–Protein interactions for RNA: ENST00000515527.1

SMAD1-216, Transcript of SMAD family member 1, humanhuman

TSL 2

Gene SMAD1, Length 632 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-216ENST00000515527 MCOLN1Q9GZU1 580 aa19.42■□□□□ 0.7
SMAD1-216ENST00000515527 PARP3Q9Y6F1 533 aa19.42■□□□□ 0.7
SMAD1-216ENST00000515527 CCDC88AQ3V6T2 1871 aa19.41■□□□□ 0.7
SMAD1-216ENST00000515527 DPY19L2Q6NUT2 758 aa19.41■□□□□ 0.7
SMAD1-216ENST00000515527 PPARGC1BQ86YN6 1023 aaKnown RBP19.41■□□□□ 0.7
SMAD1-216ENST00000515527 SMARCC1Q92922 1105 aaPredicted RBP19.41■□□□□ 0.7
SMAD1-216ENST00000515527 BEGAINQ9BUH8 593 aa19.41■□□□□ 0.7
SMAD1-216ENST00000515527 KDM6AO15550 1401 aaPredicted RBP19.41■□□□□ 0.7
SMAD1-216ENST00000515527 FAM208AQ9UK61 1670 aaKnown RBP19.4■□□□□ 0.7
SMAD1-216ENST00000515527 POTEIP0CG38 1075 aa19.4■□□□□ 0.7
SMAD1-216ENST00000515527 POTEJP0CG39 1038 aa19.4■□□□□ 0.7
SMAD1-216ENST00000515527 LINC00116Q8NCU8 138 aa19.4■□□□□ 0.7
SMAD1-216ENST00000515527 DEFB115Q30KQ5 88 aa19.38■□□□□ 0.69
SMAD1-216ENST00000515527 PASKQ96RG2 1323 aa19.38■□□□□ 0.69
SMAD1-216ENST00000515527 WDR33Q9C0J8 1336 aaKnown RBP19.38■□□□□ 0.69
SMAD1-216ENST00000515527 CHRNA5P30532 468 aa19.36■□□□□ 0.69
SMAD1-216ENST00000515527 MEGF6O75095 1541 aa19.35■□□□□ 0.69
SMAD1-216ENST00000515527 CENPJQ9HC77 1338 aaPredicted RBP19.34■□□□□ 0.69
SMAD1-216ENST00000515527 RASSF10A6NK89 507 aa19.34■□□□□ 0.69
SMAD1-216ENST00000515527 TSKSQ9UJT2 592 aa19.34■□□□□ 0.69
SMAD1-216ENST00000515527 TRAPPC3LQ5T215 181 aa19.33■□□□□ 0.68
SMAD1-216ENST00000515527 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.33■□□□□ 0.68
SMAD1-216ENST00000515527 STAC3Q96MF2 364 aa19.33■□□□□ 0.68
SMAD1-216ENST00000515527 ITGB4P16144 1822 aa19.32■□□□□ 0.68
SMAD1-216ENST00000515527 CASP8AP2Q9UKL3 1982 aa19.32■□□□□ 0.68
SMAD1-216ENST00000515527 LOC102724428A0A0B4J2F2 783 aa19.32■□□□□ 0.68
SMAD1-216ENST00000515527 SOX10P56693 466 aa19.32■□□□□ 0.68
SMAD1-216ENST00000515527 SIK1P57059 783 aa19.32■□□□□ 0.68
SMAD1-216ENST00000515527 DGKZQ13574 1117 aa19.32■□□□□ 0.68
SMAD1-216ENST00000515527 ZNF219Q9P2Y4 722 aaPredicted RBP19.32■□□□□ 0.68
SMAD1-216ENST00000515527 KTN1Q86UP2 1357 aaKnown RBP19.32■□□□□ 0.68
SMAD1-216ENST00000515527 RGPD2P0DJD1 1756 aa19.31■□□□□ 0.68
SMAD1-216ENST00000515527 MAP2P11137 1827 aaKnown RBP19.3■□□□□ 0.68
SMAD1-216ENST00000515527 GYS1P13807 737 aa19.3■□□□□ 0.68
SMAD1-216ENST00000515527 LDHDQ86WU2 507 aa19.3■□□□□ 0.68
SMAD1-216ENST00000515527 IP6K1Q92551 441 aa19.3■□□□□ 0.68
SMAD1-216ENST00000515527 RTCBQ9Y3I0 505 aaKnown RBP19.3■□□□□ 0.68
SMAD1-216ENST00000515527 GCC1Q96CN9 775 aa19.29■□□□□ 0.68
SMAD1-216ENST00000515527 ABT1Q9ULW3 272 aaKnown RBP19.29■□□□□ 0.68
SMAD1-216ENST00000515527 USP31Q70CQ4 1352 aa19.29■□□□□ 0.68
SMAD1-216ENST00000515527 ITPK1Q13572 414 aa19.28■□□□□ 0.68
SMAD1-216ENST00000515527 RFC4P35249 363 aa19.27■□□□□ 0.68
SMAD1-216ENST00000515527 ATP6V1AP38606 617 aa19.27■□□□□ 0.68
SMAD1-216ENST00000515527 PAXIP1Q6ZW49 1069 aaPredicted RBP19.27■□□□□ 0.68
SMAD1-216ENST00000515527 NME9Q86XW9 330 aa19.27■□□□□ 0.68
SMAD1-216ENST00000515527 ARHGEF1Q92888 912 aaKnown RBP19.27■□□□□ 0.68
SMAD1-216ENST00000515527 ITGBL1O95965 494 aaPredicted RBP19.26■□□□□ 0.67
SMAD1-216ENST00000515527 GRM1Q13255 1194 aa19.26■□□□□ 0.67
SMAD1-216ENST00000515527 PIGBQ92521 554 aa19.26■□□□□ 0.67
SMAD1-216ENST00000515527 CGNL1Q0VF96 1302 aa19.25■□□□□ 0.67
SMAD1-216ENST00000515527 PCDH11XQ9BZA7 1347 aa19.25■□□□□ 0.67
SMAD1-216ENST00000515527 PCDH11YQ9BZA8 1340 aa19.25■□□□□ 0.67
SMAD1-216ENST00000515527 RAPGEF4Q8WZA2 1011 aa19.25■□□□□ 0.67
SMAD1-216ENST00000515527 EVC2Q86UK5 1308 aa19.25■□□□□ 0.67
SMAD1-216ENST00000515527 ERFEQ4G0M1 354 aa19.24■□□□□ 0.67
SMAD1-216ENST00000515527 DDNO94850 711 aaPredicted RBP19.23■□□□□ 0.67
SMAD1-216ENST00000515527 CAPNS2Q96L46 248 aa19.23■□□□□ 0.67
SMAD1-216ENST00000515527 GPR101Q96P66 508 aaPredicted RBP19.23■□□□□ 0.67
SMAD1-216ENST00000515527 THSD7BQ9C0I4 1608 aa19.22■□□□□ 0.67
SMAD1-216ENST00000515527 DICER1Q9UPY3 1922 aaKnown RBP19.22■□□□□ 0.67
SMAD1-216ENST00000515527 IQCA1LA6NCM1 817 aa19.22■□□□□ 0.67
SMAD1-216ENST00000515527 NFKBIEO00221 500 aa19.22■□□□□ 0.67
SMAD1-216ENST00000515527 ADRA2BP18089 450 aa19.22■□□□□ 0.67
SMAD1-216ENST00000515527 NBPF1Q3BBV0 1214 aa19.22■□□□□ 0.67
SMAD1-216ENST00000515527 EAPPQ56P03 285 aaPredicted RBP19.22■□□□□ 0.67
SMAD1-216ENST00000515527 CLEC11AQ9Y240 323 aa19.22■□□□□ 0.67
SMAD1-216ENST00000515527 MON2Q7Z3U7 1717 aa19.22■□□□□ 0.67
SMAD1-216ENST00000515527 TATP17735 454 aaPredicted RBP19.21■□□□□ 0.67
SMAD1-216ENST00000515527 ECE1P42892 770 aa19.21■□□□□ 0.67
SMAD1-216ENST00000515527 LTBP1Q14766 1721 aa19.2■□□□□ 0.66
SMAD1-216ENST00000515527 DLL1O00548 723 aa19.2■□□□□ 0.66
SMAD1-216ENST00000515527 HABP4Q5JVS0 413 aaKnown RBP19.2■□□□□ 0.66
SMAD1-216ENST00000515527 USHBP1Q8N6Y0 703 aa19.2■□□□□ 0.66
SMAD1-216ENST00000515527 DDR1Q08345 913 aa19.19■□□□□ 0.66
SMAD1-216ENST00000515527 TAF1DQ9H5J8 278 aaPredicted RBP19.19■□□□□ 0.66
SMAD1-216ENST00000515527 CYP4F22Q6NT55 531 aa19.18■□□□□ 0.66
SMAD1-216ENST00000515527 TTLL6Q8N841 843 aa19.18■□□□□ 0.66
SMAD1-216ENST00000515527 CD163L1Q9NR16 1453 aa19.17■□□□□ 0.66
SMAD1-216ENST00000515527 SCN4AP35499 1836 aa19.17■□□□□ 0.66
SMAD1-216ENST00000515527 CA12O43570 354 aa19.17■□□□□ 0.66
SMAD1-216ENST00000515527 ASAP1Q9ULH1 1129 aa19.17■□□□□ 0.66
SMAD1-216ENST00000515527 CYP27B1O15528 508 aa19.16■□□□□ 0.66
SMAD1-216ENST00000515527 HOXC9P31274 260 aa19.16■□□□□ 0.66
SMAD1-216ENST00000515527 AMPHP49418 695 aa19.16■□□□□ 0.66
SMAD1-216ENST00000515527 NBPF6Q5VWK0 638 aa19.16■□□□□ 0.66
SMAD1-216ENST00000515527 NBPF15Q8N660 670 aa19.16■□□□□ 0.66
SMAD1-216ENST00000515527 NBPF4Q96M43 638 aa19.16■□□□□ 0.66
SMAD1-216ENST00000515527 FKBP8Q14318 412 aa19.15■□□□□ 0.66
SMAD1-216ENST00000515527 CNTROBQ8N137 903 aa19.15■□□□□ 0.66
SMAD1-216ENST00000515527 TMOD3Q9NYL9 352 aa19.14■□□□□ 0.65
SMAD1-216ENST00000515527 AOC2O75106 756 aa19.13■□□□□ 0.65
SMAD1-216ENST00000515527 RPS6KA4O75676 772 aa19.13■□□□□ 0.65
SMAD1-216ENST00000515527 MAP1SQ66K74 1059 aaPredicted RBP19.13■□□□□ 0.65
SMAD1-216ENST00000515527 DLEC1Q9Y238 1755 aa19.12■□□□□ 0.65
SMAD1-216ENST00000515527 SRP68Q9UHB9 627 aaKnown RBP19.12■□□□□ 0.65
SMAD1-216ENST00000515527 SBNO2Q9Y2G9 1366 aa19.11■□□□□ 0.65
SMAD1-216ENST00000515527 MAP3K19Q56UN5 1328 aa19.11■□□□□ 0.65
SMAD1-216ENST00000515527 POLRMTO00411 1230 aaKnown RBP19.11■□□□□ 0.65
SMAD1-216ENST00000515527 MAP2K2P36507 400 aa19.11■□□□□ 0.65
SMAD1-216ENST00000515527 RC3H1Q5TC82 1133 aaKnown RBP19.11■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms