RNA–Protein interactions for RNA: ENST00000515056.5

APBB3-221, Transcript of amyloid beta precursor protein binding family B member 3, humanhuman

TSL 2

Gene APBB3, Length 2,064 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APBB3-221ENST00000515056 FRAT1Q92837 279 aaPredicted RBP18.57■□□□□ 0.56
APBB3-221ENST00000515056 EXOC5O00471 708 aa18.56■□□□□ 0.56
APBB3-221ENST00000515056 DISP2A7MBM2 1401 aa18.56■□□□□ 0.56
APBB3-221ENST00000515056 RXRBP28702 533 aa18.56■□□□□ 0.56
APBB3-221ENST00000515056 SPG7Q9UQ90 795 aa18.56■□□□□ 0.56
APBB3-221ENST00000515056 GLI3P10071 1580 aa18.55■□□□□ 0.56
APBB3-221ENST00000515056 RGS3P49796 1198 aa18.54■□□□□ 0.56
APBB3-221ENST00000515056 TRIM35Q9UPQ4 493 aa18.54■□□□□ 0.56
APBB3-221ENST00000515056 OVOS2A0A0G2JMS6 1433 aa18.54■□□□□ 0.56
APBB3-221ENST00000515056 A0A0G2JS52 829 aa18.54■□□□□ 0.56
APBB3-221ENST00000515056 DDB1Q16531 1140 aa18.54■□□□□ 0.56
APBB3-221ENST00000515056 NFKBIBQ15653 356 aa18.53■□□□□ 0.56
APBB3-221ENST00000515056 NFE2L2Q16236 605 aa18.53■□□□□ 0.56
APBB3-221ENST00000515056 GAS2L2Q8NHY3 880 aa18.53■□□□□ 0.56
APBB3-221ENST00000515056 GLIPR1L2Q4G1C9 344 aa18.53■□□□□ 0.56
APBB3-221ENST00000515056 ZKSCAN2Q63HK3 967 aa18.53■□□□□ 0.56
APBB3-221ENST00000515056 SEPT12Q8IYM1 358 aa18.53■□□□□ 0.56
APBB3-221ENST00000515056 DDX54Q8TDD1 881 aaKnown RBP18.53■□□□□ 0.56
APBB3-221ENST00000515056 VIRMAQ69YN4 1812 aaKnown RBP18.52■□□□□ 0.56
APBB3-221ENST00000515056 PLEKHG2Q9H7P9 1386 aa18.52■□□□□ 0.56
APBB3-221ENST00000515056 CYP27B1O15528 508 aa18.52■□□□□ 0.56
APBB3-221ENST00000515056 RIPK4P57078 832 aa18.52■□□□□ 0.56
APBB3-221ENST00000515056 ZNF530Q6P9A1 599 aaPredicted RBP18.52■□□□□ 0.56
APBB3-221ENST00000515056 RLBP1P12271 317 aa18.51■□□□□ 0.55
APBB3-221ENST00000515056 MVPQ14764 893 aaKnown RBP18.5■□□□□ 0.55
APBB3-221ENST00000515056 IFNL2Q8IZJ0 200 aa18.5■□□□□ 0.55
APBB3-221ENST00000515056 RWDD1Q9H446 243 aaPredicted RBP18.5■□□□□ 0.55
APBB3-221ENST00000515056 PARP4Q9UKK3 1724 aaKnown RBP18.5■□□□□ 0.55
APBB3-221ENST00000515056 PHKG2P15735 406 aa18.5■□□□□ 0.55
APBB3-221ENST00000515056 AKAP4Q5JQC9 854 aa18.5■□□□□ 0.55
APBB3-221ENST00000515056 C1orf141Q5JVX7 400 aa18.5■□□□□ 0.55
APBB3-221ENST00000515056 PCDH11XQ9BZA7 1347 aa18.49■□□□□ 0.55
APBB3-221ENST00000515056 PCDH11YQ9BZA8 1340 aa18.49■□□□□ 0.55
APBB3-221ENST00000515056 PCDHB15Q9Y5E8 787 aa18.49■□□□□ 0.55
APBB3-221ENST00000515056 GNAT3A8MTJ3 354 aa18.48■□□□□ 0.55
APBB3-221ENST00000515056 DZIP1LQ8IYY4 767 aaKnown RBP18.48■□□□□ 0.55
APBB3-221ENST00000515056 EXOSC9Q06265 439 aaKnown RBP18.48■□□□□ 0.55
APBB3-221ENST00000515056 WNK3Q9BYP7 1800 aa18.47■□□□□ 0.55
APBB3-221ENST00000515056 MARCH10Q8NA82 808 aaPredicted RBP18.47■□□□□ 0.55
APBB3-221ENST00000515056 MPRIPQ6WCQ1 1025 aa18.46■□□□□ 0.55
APBB3-221ENST00000515056 BCL2L13Q9BXK5 485 aa18.46■□□□□ 0.55
APBB3-221ENST00000515056 PKD1L3Q7Z443 1732 aa18.46■□□□□ 0.55
APBB3-221ENST00000515056 RTF1Q92541 710 aaKnown RBP18.46■□□□□ 0.55
APBB3-221ENST00000515056 TSR2Q969E8 191 aaKnown RBP18.46■□□□□ 0.55
APBB3-221ENST00000515056 ZNF428Q96B54 188 aa18.46■□□□□ 0.55
APBB3-221ENST00000515056 TNNQ9UQP3 1299 aa18.46■□□□□ 0.55
APBB3-221ENST00000515056 THSD7AQ9UPZ6 1657 aa18.46■□□□□ 0.55
APBB3-221ENST00000515056 TNS2Q63HR2 1409 aa18.46■□□□□ 0.55
APBB3-221ENST00000515056 HTATSF1O43719 755 aaKnown RBP18.45■□□□□ 0.54
APBB3-221ENST00000515056 DCTN1Q14203 1278 aa18.45■□□□□ 0.54
APBB3-221ENST00000515056 NKX1-1Q15270 411 aaPredicted RBP18.45■□□□□ 0.54
APBB3-221ENST00000515056 IL17REQ8NFR9 667 aa18.45■□□□□ 0.54
APBB3-221ENST00000515056 LGR6Q9HBX8 967 aa18.45■□□□□ 0.54
APBB3-221ENST00000515056 MCM10Q7L590 875 aa18.45■□□□□ 0.54
APBB3-221ENST00000515056 FTSJ3Q8IY81 847 aaKnown RBP18.45■□□□□ 0.54
APBB3-221ENST00000515056 SMC4Q9NTJ3 1288 aa18.45■□□□□ 0.54
APBB3-221ENST00000515056 DAXXQ9UER7 740 aaPredicted RBP18.45■□□□□ 0.54
APBB3-221ENST00000515056 MAP3K5Q99683 1374 aa18.44■□□□□ 0.54
APBB3-221ENST00000515056 DLG5Q8TDM6 1919 aa18.44■□□□□ 0.54
APBB3-221ENST00000515056 HSP90AB1P08238 724 aaKnown RBP18.44■□□□□ 0.54
APBB3-221ENST00000515056 ALDH1L2Q3SY69 923 aa18.44■□□□□ 0.54
APBB3-221ENST00000515056 BRPF1P55201 1214 aaPredicted RBP18.43■□□□□ 0.54
APBB3-221ENST00000515056 SSH1Q8WYL5 1049 aa18.43■□□□□ 0.54
APBB3-221ENST00000515056 DCAF5Q96JK2 942 aa18.43■□□□□ 0.54
APBB3-221ENST00000515056 DDX19BQ9UMR2 479 aa18.43■□□□□ 0.54
APBB3-221ENST00000515056 LRRC37A3O60309 1634 aa18.43■□□□□ 0.54
APBB3-221ENST00000515056 KAT6BQ8WYB5 2073 aa18.43■□□□□ 0.54
APBB3-221ENST00000515056 LMOD3Q0VAK6 560 aa18.43■□□□□ 0.54
APBB3-221ENST00000515056 FAM182BQ5T319 152 aa18.43■□□□□ 0.54
APBB3-221ENST00000515056 ATF7IPQ6VMQ6 1270 aa18.43■□□□□ 0.54
APBB3-221ENST00000515056 KRT27Q7Z3Y8 459 aa18.43■□□□□ 0.54
APBB3-221ENST00000515056 SHANK3Q9BYB0 1731 aa18.43■□□□□ 0.54
APBB3-221ENST00000515056 IPO8O15397 1037 aaKnown RBP18.42■□□□□ 0.54
APBB3-221ENST00000515056 RNMTO43148 476 aaKnown RBP18.42■□□□□ 0.54
APBB3-221ENST00000515056 CALD1Q05682 793 aaKnown RBP18.42■□□□□ 0.54
APBB3-221ENST00000515056 THUMPD2Q9BTF0 503 aaKnown RBP18.42■□□□□ 0.54
APBB3-221ENST00000515056 KIF16BQ96L93 1317 aa18.42■□□□□ 0.54
APBB3-221ENST00000515056 HDAC1Q13547 482 aaPredicted RBP18.42■□□□□ 0.54
APBB3-221ENST00000515056 PDZRN3Q9UPQ7 1066 aa18.42■□□□□ 0.54
APBB3-221ENST00000515056 TRIM27P14373 513 aa18.41■□□□□ 0.54
APBB3-221ENST00000515056 RGS12O14924 1447 aa18.4■□□□□ 0.54
APBB3-221ENST00000515056 EP400Q96L91 3159 aa18.39■□□□□ 0.53
APBB3-221ENST00000515056 BRWD3Q6RI45 1802 aa18.39■□□□□ 0.53
APBB3-221ENST00000515056 KDM6AO15550 1401 aaPredicted RBP18.38■□□□□ 0.53
APBB3-221ENST00000515056 CEMIPQ8WUJ3 1361 aa18.38■□□□□ 0.53
APBB3-221ENST00000515056 ERVV-2B6SEH9 535 aa18.38■□□□□ 0.53
APBB3-221ENST00000515056 NFATC2IPQ8NCF5 419 aa18.38■□□□□ 0.53
APBB3-221ENST00000515056 NOB1Q9ULX3 412 aaKnown RBP18.38■□□□□ 0.53
APBB3-221ENST00000515056 TEFQ10587 303 aa18.37■□□□□ 0.53
APBB3-221ENST00000515056 PRIM1P49642 420 aaKnown RBP18.36■□□□□ 0.53
APBB3-221ENST00000515056 CABP4P57796 275 aa18.36■□□□□ 0.53
APBB3-221ENST00000515056 ACSBG1Q96GR2 724 aa18.36■□□□□ 0.53
APBB3-221ENST00000515056 SLC52A2Q9HAB3 445 aa18.35■□□□□ 0.53
APBB3-221ENST00000515056 TAF7Q15545 349 aaPredicted RBP18.35■□□□□ 0.53
APBB3-221ENST00000515056 FAM196AQ6ZSG2 479 aa18.35■□□□□ 0.53
APBB3-221ENST00000515056 ARHGAP45Q92619 1136 aa18.35■□□□□ 0.53
APBB3-221ENST00000515056 IFT57Q9NWB7 429 aa18.35■□□□□ 0.53
APBB3-221ENST00000515056 GNAI1P63096 354 aa18.34■□□□□ 0.53
APBB3-221ENST00000515056 SYTL4Q96C24 671 aaPredicted RBP18.34■□□□□ 0.53
APBB3-221ENST00000515056 CHMP4BQ9H444 224 aaKnown RBP18.34■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms