RNA–Protein interactions for RNA: ENST00000514962.5

CALCOCO2-224, Transcript of calcium binding and coiled-coil domain 2, humanhuman

TSL 2

Gene CALCOCO2, Length 765 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-224ENST00000514962 EMILIN3Q9NT22 766 aa7.8□□□□□ -1.16
CALCOCO2-224ENST00000514962 ZBTB40Q9NUA8 1239 aa7.8□□□□□ -1.16
CALCOCO2-224ENST00000514962 MAP3K4Q9Y6R4 1608 aa7.8□□□□□ -1.16
CALCOCO2-224ENST00000514962 NSD2O96028 1365 aa7.8□□□□□ -1.16
CALCOCO2-224ENST00000514962 SETBP1Q9Y6X0 1596 aa7.8□□□□□ -1.16
CALCOCO2-224ENST00000514962 TET3O43151 1660 aa7.79□□□□□ -1.16
CALCOCO2-224ENST00000514962 ABCA6Q8N139 1617 aa7.79□□□□□ -1.16
CALCOCO2-224ENST00000514962 POTEB3A0JP26 581 aa7.79□□□□□ -1.16
CALCOCO2-224ENST00000514962 PPP4R3BQ5MIZ7 849 aa7.79□□□□□ -1.16
CALCOCO2-224ENST00000514962 MCTP1Q6DN14 999 aa7.79□□□□□ -1.16
CALCOCO2-224ENST00000514962 POTEBQ6S5H4 581 aa7.79□□□□□ -1.16
CALCOCO2-224ENST00000514962 ZNF687Q8N1G0 1237 aa7.79□□□□□ -1.16
CALCOCO2-224ENST00000514962 UPF1Q92900 1129 aaKnown RBP eCLIP7.79□□□□□ -1.16
CALCOCO2-224ENST00000514962 SYAP1Q96A49 352 aaPredicted RBP7.79□□□□□ -1.16
CALCOCO2-224ENST00000514962 TRAPPC8Q9Y2L5 1435 aa7.78□□□□□ -1.16
CALCOCO2-224ENST00000514962 IFT172Q9UG01 1749 aa7.78□□□□□ -1.16
CALCOCO2-224ENST00000514962 DPYSL4O14531 572 aa7.78□□□□□ -1.16
CALCOCO2-224ENST00000514962 SEMA3EO15041 775 aa7.78□□□□□ -1.16
CALCOCO2-224ENST00000514962 PHF14O94880 888 aa7.78□□□□□ -1.16
CALCOCO2-224ENST00000514962 TRIM27P14373 513 aa7.78□□□□□ -1.16
CALCOCO2-224ENST00000514962 PRIM1P49642 420 aaKnown RBP7.78□□□□□ -1.16
CALCOCO2-224ENST00000514962 ALDH1L2Q3SY69 923 aa7.78□□□□□ -1.16
CALCOCO2-224ENST00000514962 TBC1D9Q6ZT07 1266 aa7.78□□□□□ -1.16
CALCOCO2-224ENST00000514962 MORC1Q86VD1 984 aa7.78□□□□□ -1.16
CALCOCO2-224ENST00000514962 ITPRIPQ8IWB1 547 aa7.78□□□□□ -1.16
CALCOCO2-224ENST00000514962 FAM184AQ8NB25 1140 aa7.78□□□□□ -1.16
CALCOCO2-224ENST00000514962 CARD14Q9BXL6 1004 aa7.78□□□□□ -1.16
CALCOCO2-224ENST00000514962 TSPY26PQ9H489 355 aa7.78□□□□□ -1.16
CALCOCO2-224ENST00000514962 SMC4Q9NTJ3 1288 aa7.78□□□□□ -1.16
CALCOCO2-224ENST00000514962 ZHX1Q9UKY1 873 aaPredicted RBP7.78□□□□□ -1.16
CALCOCO2-224ENST00000514962 LHX6Q9UPM6 363 aa7.78□□□□□ -1.16
CALCOCO2-224ENST00000514962 PIK3R4Q99570 1358 aa7.78□□□□□ -1.16
CALCOCO2-224ENST00000514962 DEPDC5O75140 1603 aa7.78□□□□□ -1.16
CALCOCO2-224ENST00000514962 ZMYND10O75800 440 aa7.77□□□□□ -1.17
CALCOCO2-224ENST00000514962 CD2BP2O95400 341 aaKnown RBP7.77□□□□□ -1.17
CALCOCO2-224ENST00000514962 PTMAP06454 111 aaKnown RBP7.77□□□□□ -1.17
CALCOCO2-224ENST00000514962 TPM3P06753 285 aa7.77□□□□□ -1.17
CALCOCO2-224ENST00000514962 PDE4CQ08493 712 aa7.77□□□□□ -1.17
CALCOCO2-224ENST00000514962 FAM177A1Q8N128 213 aaPredicted RBP7.77□□□□□ -1.17
CALCOCO2-224ENST00000514962 PIBF1Q8WXW3 757 aa7.77□□□□□ -1.17
CALCOCO2-224ENST00000514962 PRDM10Q9NQV6 1147 aa7.77□□□□□ -1.17
CALCOCO2-224ENST00000514962 SPTLC3Q9NUV7 552 aa7.77□□□□□ -1.17
CALCOCO2-224ENST00000514962 NSD3Q9BZ95 1437 aa7.77□□□□□ -1.17
CALCOCO2-224ENST00000514962 NRXN1Q9ULB1 1477 aa7.76□□□□□ -1.17
CALCOCO2-224ENST00000514962 PBX2P40425 430 aa7.76□□□□□ -1.17
CALCOCO2-224ENST00000514962 SYCP1Q15431 976 aa7.76□□□□□ -1.17
CALCOCO2-224ENST00000514962 TMEM57Q8N5G2 664 aa7.76□□□□□ -1.17
CALCOCO2-224ENST00000514962 GPT2Q8TD30 523 aa7.76□□□□□ -1.17
CALCOCO2-224ENST00000514962 OXER1Q8TDS5 423 aa7.76□□□□□ -1.17
CALCOCO2-224ENST00000514962 AK7Q96M32 723 aa7.76□□□□□ -1.17
CALCOCO2-224ENST00000514962 FEZ1Q99689 392 aa7.76□□□□□ -1.17
CALCOCO2-224ENST00000514962 BCL2L13Q9BXK5 485 aa7.76□□□□□ -1.17
CALCOCO2-224ENST00000514962 GPBP1L1Q9HC44 474 aaPredicted RBP7.76□□□□□ -1.17
CALCOCO2-224ENST00000514962 DIAPH3Q9NSV4 1193 aa7.76□□□□□ -1.17
CALCOCO2-224ENST00000514962 RRP7AQ9Y3A4 280 aaKnown RBP7.76□□□□□ -1.17
CALCOCO2-224ENST00000514962 KIF3AQ9Y496 699 aa7.76□□□□□ -1.17
CALCOCO2-224ENST00000514962 ARIH1Q9Y4X5 557 aaPredicted RBP7.76□□□□□ -1.17
CALCOCO2-224ENST00000514962 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP7.76□□□□□ -1.17
CALCOCO2-224ENST00000514962 ARHGAP5Q13017 1502 aa7.76□□□□□ -1.17
CALCOCO2-224ENST00000514962 KIF24Q5T7B8 1368 aa7.75□□□□□ -1.17
CALCOCO2-224ENST00000514962 PATL2C9JE40 543 aaKnown RBP7.75□□□□□ -1.17
CALCOCO2-224ENST00000514962 PRPF40AO75400 957 aaKnown RBP7.75□□□□□ -1.17
CALCOCO2-224ENST00000514962 GABPB1Q06547 395 aaPredicted RBP7.75□□□□□ -1.17
CALCOCO2-224ENST00000514962 SSH1Q8WYL5 1049 aa7.75□□□□□ -1.17
CALCOCO2-224ENST00000514962 ARHGAP45Q92619 1136 aa7.75□□□□□ -1.17
CALCOCO2-224ENST00000514962 CCDC97Q96F63 343 aaPredicted RBP7.75□□□□□ -1.17
CALCOCO2-224ENST00000514962 KRTAP3-3Q9BYR6 98 aa7.75□□□□□ -1.17
CALCOCO2-224ENST00000514962 KRTAP3-2Q9BYR7 98 aa7.75□□□□□ -1.17
CALCOCO2-224ENST00000514962 LNPKQ9C0E8 428 aa7.75□□□□□ -1.17
CALCOCO2-224ENST00000514962 PPIP5K1Q6PFW1 1433 aa7.75□□□□□ -1.17
CALCOCO2-224ENST00000514962 VWDEQ8N2E2 1590 aa7.75□□□□□ -1.17
CALCOCO2-224ENST00000514962 A6NJR5 290 aa7.74□□□□□ -1.17
CALCOCO2-224ENST00000514962 FAM193AP78312 1265 aa7.74□□□□□ -1.17
CALCOCO2-224ENST00000514962 MAP3K9P80192 1104 aa7.74□□□□□ -1.17
CALCOCO2-224ENST00000514962 EXOSC9Q06265 439 aaKnown RBP7.74□□□□□ -1.17
CALCOCO2-224ENST00000514962 FKBP5Q13451 457 aaPredicted RBP7.74□□□□□ -1.17
CALCOCO2-224ENST00000514962 NOLC1Q14978 699 aaKnown RBP eCLIP7.74□□□□□ -1.17
CALCOCO2-224ENST00000514962 DNTTIP2Q5QJE6 756 aaKnown RBP7.74□□□□□ -1.17
CALCOCO2-224ENST00000514962 PDCL2Q8N4E4 241 aa7.74□□□□□ -1.17
CALCOCO2-224ENST00000514962 ANKRD7Q92527 254 aa7.74□□□□□ -1.17
CALCOCO2-224ENST00000514962 TMEM63CQ9P1W3 806 aa7.74□□□□□ -1.17
CALCOCO2-224ENST00000514962 NOB1Q9ULX3 412 aaKnown RBP7.74□□□□□ -1.17
CALCOCO2-224ENST00000514962 PTCH1Q13635 1447 aa7.74□□□□□ -1.17
CALCOCO2-224ENST00000514962 KIF1BO60333 1816 aa7.73□□□□□ -1.17
CALCOCO2-224ENST00000514962 QRICH2Q9H0J4 1663 aa7.73□□□□□ -1.17
CALCOCO2-224ENST00000514962 ATAD2Q6PL18 1390 aa7.73□□□□□ -1.17
CALCOCO2-224ENST00000514962 SYCE3A1L190 88 aa7.73□□□□□ -1.17
CALCOCO2-224ENST00000514962 GTF2E1P29083 439 aaPredicted RBP7.73□□□□□ -1.17
CALCOCO2-224ENST00000514962 MCM2P49736 904 aa7.73□□□□□ -1.17
CALCOCO2-224ENST00000514962 CHAF1AQ13111 956 aaPredicted RBP7.73□□□□□ -1.17
CALCOCO2-224ENST00000514962 ANKRD45Q5TZF3 282 aa7.73□□□□□ -1.17
CALCOCO2-224ENST00000514962 INTS3Q68E01 1043 aaKnown RBP7.73□□□□□ -1.17
CALCOCO2-224ENST00000514962 SMYD5Q6GMV2 418 aa7.73□□□□□ -1.17
CALCOCO2-224ENST00000514962 SPNS2Q8IVW8 549 aa7.73□□□□□ -1.17
CALCOCO2-224ENST00000514962 USP26Q9BXU7 913 aa7.73□□□□□ -1.17
CALCOCO2-224ENST00000514962 KDM4CQ9H3R0 1056 aa7.73□□□□□ -1.17
CALCOCO2-224ENST00000514962 OGFRQ9NZT2 677 aa7.73□□□□□ -1.17
CALCOCO2-224ENST00000514962 BCCIPQ9P287 314 aaKnown RBP eCLIP7.73□□□□□ -1.17
CALCOCO2-224ENST00000514962 RBM27Q9P2N5 1060 aaKnown RBP7.73□□□□□ -1.17
CALCOCO2-224ENST00000514962 SERPINA10Q9UK55 444 aa7.73□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 172.1 ms