RNA–Protein interactions for RNA: ENST00000514467.5

SNCAIP-219, Transcript of synuclein alpha interacting protein, humanhuman

TSL 3

Gene SNCAIP, Length 723 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAIP-219ENST00000514467 PTF1AQ7RTS3 328 aa17.59■□□□□ 0.41
SNCAIP-219ENST00000514467 SLC52A2Q9HAB3 445 aa17.59■□□□□ 0.41
SNCAIP-219ENST00000514467 TMOD3Q9NYL9 352 aa17.59■□□□□ 0.41
SNCAIP-219ENST00000514467 TEFQ10587 303 aa17.58■□□□□ 0.4
SNCAIP-219ENST00000514467 SRCAPQ6ZRS2 3230 aa17.58■□□□□ 0.4
SNCAIP-219ENST00000514467 RGPD3A6NKT7 1758 aaPredicted RBP17.58■□□□□ 0.4
SNCAIP-219ENST00000514467 RGPD4Q7Z3J3 1758 aa17.58■□□□□ 0.4
SNCAIP-219ENST00000514467 HNRNPUQ00839 825 aaKnown RBP eCLIP17.57■□□□□ 0.4
SNCAIP-219ENST00000514467 WWC1Q8IX03 1113 aa17.57■□□□□ 0.4
SNCAIP-219ENST00000514467 NGEFQ8N5V2 710 aa17.57■□□□□ 0.4
SNCAIP-219ENST00000514467 NFATC2IPQ8NCF5 419 aa17.57■□□□□ 0.4
SNCAIP-219ENST00000514467 PIGBQ92521 554 aa17.56■□□□□ 0.4
SNCAIP-219ENST00000514467 BCL11BQ9C0K0 894 aaPredicted RBP17.56■□□□□ 0.4
SNCAIP-219ENST00000514467 ZNF521Q96K83 1311 aa17.53■□□□□ 0.4
SNCAIP-219ENST00000514467 TAF7Q15545 349 aaPredicted RBP17.53■□□□□ 0.4
SNCAIP-219ENST00000514467 TAF1LQ8IZX4 1826 aa17.53■□□□□ 0.4
SNCAIP-219ENST00000514467 KCPQ6ZWJ8 1503 aa17.52■□□□□ 0.4
SNCAIP-219ENST00000514467 C5P01031 1676 aa17.52■□□□□ 0.4
SNCAIP-219ENST00000514467 BTBD11A6QL63 1104 aa17.52■□□□□ 0.4
SNCAIP-219ENST00000514467 CALD1Q05682 793 aaKnown RBP17.52■□□□□ 0.4
SNCAIP-219ENST00000514467 ASAP1Q9ULH1 1129 aa17.52■□□□□ 0.4
SNCAIP-219ENST00000514467 ZNF831Q5JPB2 1677 aa17.52■□□□□ 0.39
SNCAIP-219ENST00000514467 RREB1Q92766 1687 aa17.52■□□□□ 0.39
SNCAIP-219ENST00000514467 TJP1Q07157 1748 aa17.51■□□□□ 0.39
SNCAIP-219ENST00000514467 SLC39A6Q13433 755 aa17.51■□□□□ 0.39
SNCAIP-219ENST00000514467 WDR63Q8IWG1 891 aa17.51■□□□□ 0.39
SNCAIP-219ENST00000514467 ATG3Q9NT62 314 aa17.51■□□□□ 0.39
SNCAIP-219ENST00000514467 MIS18AQ9NYP9 233 aa17.51■□□□□ 0.39
SNCAIP-219ENST00000514467 LAS1LQ9Y4W2 734 aaKnown RBP17.51■□□□□ 0.39
SNCAIP-219ENST00000514467 LAMB4A4D0S4 1761 aa17.51■□□□□ 0.39
SNCAIP-219ENST00000514467 CICQ96RK0 1608 aaPredicted RBP17.5■□□□□ 0.39
SNCAIP-219ENST00000514467 APBA3O96018 575 aa17.5■□□□□ 0.39
SNCAIP-219ENST00000514467 PALLDQ8WX93 1383 aa17.5■□□□□ 0.39
SNCAIP-219ENST00000514467 COL5A3P25940 1745 aaPredicted RBP17.5■□□□□ 0.39
SNCAIP-219ENST00000514467 SF3B2Q13435 895 aaKnown RBP17.49■□□□□ 0.39
SNCAIP-219ENST00000514467 CFAP44Q96MT7 982 aa17.49■□□□□ 0.39
SNCAIP-219ENST00000514467 YTHDC1Q96MU7 727 aaKnown RBP17.49■□□□□ 0.39
SNCAIP-219ENST00000514467 IFT57Q9NWB7 429 aa17.49■□□□□ 0.39
SNCAIP-219ENST00000514467 TSPYL4Q9UJ04 414 aa17.49■□□□□ 0.39
SNCAIP-219ENST00000514467 IL16Q14005 1332 aa17.48■□□□□ 0.39
SNCAIP-219ENST00000514467 ZBED9Q6R2W3 1325 aa17.48■□□□□ 0.39
SNCAIP-219ENST00000514467 NUP188Q5SRE5 1749 aa17.48■□□□□ 0.39
SNCAIP-219ENST00000514467 KCNQ3O43525 872 aa17.48■□□□□ 0.39
SNCAIP-219ENST00000514467 ZNF853P0CG23 659 aa17.48■□□□□ 0.39
SNCAIP-219ENST00000514467 GNAI1P63096 354 aa17.48■□□□□ 0.39
SNCAIP-219ENST00000514467 ZNF790Q6PG37 636 aa17.48■□□□□ 0.39
SNCAIP-219ENST00000514467 TTC5Q8N0Z6 440 aa17.48■□□□□ 0.39
SNCAIP-219ENST00000514467 UPF1Q92900 1129 aaKnown RBP eCLIP17.48■□□□□ 0.39
SNCAIP-219ENST00000514467 CHL1O00533 1208 aa17.47■□□□□ 0.39
SNCAIP-219ENST00000514467 SMARCC1Q92922 1105 aaPredicted RBP17.47■□□□□ 0.39
SNCAIP-219ENST00000514467 SPINK5Q9NQ38 1064 aaPredicted RBP17.47■□□□□ 0.39
SNCAIP-219ENST00000514467 MBIPQ9NS73 344 aa17.47■□□□□ 0.39
SNCAIP-219ENST00000514467 BABAM1Q9NWV8 329 aa17.47■□□□□ 0.39
SNCAIP-219ENST00000514467 GOLGA2Q08379 1002 aa17.46■□□□□ 0.39
SNCAIP-219ENST00000514467 CCDC125Q86Z20 511 aa17.46■□□□□ 0.39
SNCAIP-219ENST00000514467 PLSCR1O15162 318 aa17.45■□□□□ 0.38
SNCAIP-219ENST00000514467 PTCD1O75127 700 aaKnown RBP17.45■□□□□ 0.38
SNCAIP-219ENST00000514467 BAG6P46379 1132 aa17.45■□□□□ 0.38
SNCAIP-219ENST00000514467 TSR2Q969E8 191 aaKnown RBP17.45■□□□□ 0.38
SNCAIP-219ENST00000514467 DEFB132Q7Z7B7 95 aa17.44■□□□□ 0.38
SNCAIP-219ENST00000514467 CDCA7LQ96GN5 454 aa17.44■□□□□ 0.38
SNCAIP-219ENST00000514467 RBM42Q9BTD8 480 aaKnown RBP17.44■□□□□ 0.38
SNCAIP-219ENST00000514467 FANCIQ9NVI1 1328 aa17.44■□□□□ 0.38
SNCAIP-219ENST00000514467 HEG1Q9ULI3 1381 aa17.43■□□□□ 0.38
SNCAIP-219ENST00000514467 LOC102724428A0A0B4J2F2 783 aa17.43■□□□□ 0.38
SNCAIP-219ENST00000514467 SIK1P57059 783 aa17.43■□□□□ 0.38
SNCAIP-219ENST00000514467 EIF4A1P60842 406 aaKnown RBP17.43■□□□□ 0.38
SNCAIP-219ENST00000514467 EN1Q05925 392 aaPredicted RBP17.43■□□□□ 0.38
SNCAIP-219ENST00000514467 ZNF496Q96IT1 587 aaPredicted RBP17.43■□□□□ 0.38
SNCAIP-219ENST00000514467 FMNL2Q96PY5 1086 aa17.43■□□□□ 0.38
SNCAIP-219ENST00000514467 C4BP0C0L5 1744 aa17.42■□□□□ 0.38
SNCAIP-219ENST00000514467 E9PSI1 815 aa17.42■□□□□ 0.38
SNCAIP-219ENST00000514467 SLC4A9Q96Q91 983 aa17.42■□□□□ 0.38
SNCAIP-219ENST00000514467 MYH14Q7Z406 1995 aaKnown RBP17.42■□□□□ 0.38
SNCAIP-219ENST00000514467 TUBGCP6Q96RT7 1819 aa17.42■□□□□ 0.38
SNCAIP-219ENST00000514467 KCNQ4P56696 695 aa17.41■□□□□ 0.38
SNCAIP-219ENST00000514467 SLFN5Q08AF3 891 aa17.41■□□□□ 0.38
SNCAIP-219ENST00000514467 EZH2Q15910 746 aaKnown RBP17.41■□□□□ 0.38
SNCAIP-219ENST00000514467 TXNRD1Q16881 649 aa17.41■□□□□ 0.38
SNCAIP-219ENST00000514467 CAMKK2Q96RR4 588 aa17.41■□□□□ 0.38
SNCAIP-219ENST00000514467 MYH16Q9H6N6 1097 aa17.41■□□□□ 0.38
SNCAIP-219ENST00000514467 CCNL1Q9UK58 526 aaPredicted RBP17.41■□□□□ 0.38
SNCAIP-219ENST00000514467 ATP6V1AP38606 617 aa17.4■□□□□ 0.38
SNCAIP-219ENST00000514467 KRT24Q2M2I5 525 aa17.4■□□□□ 0.38
SNCAIP-219ENST00000514467 PROM2Q8N271 834 aa17.4■□□□□ 0.38
SNCAIP-219ENST00000514467 PRAMEF22A3QJZ6 481 aa17.39■□□□□ 0.37
SNCAIP-219ENST00000514467 LRRC4BQ9NT99 713 aa17.39■□□□□ 0.37
SNCAIP-219ENST00000514467 UBR3Q6ZT12 1888 aa17.39■□□□□ 0.37
SNCAIP-219ENST00000514467 ITPK1Q13572 414 aa17.38■□□□□ 0.37
SNCAIP-219ENST00000514467 SLC27A3Q5K4L6 730 aa17.38■□□□□ 0.37
SNCAIP-219ENST00000514467 TRMT2AQ8IZ69 625 aaKnown RBP17.38■□□□□ 0.37
SNCAIP-219ENST00000514467 VSIG10Q8N0Z9 540 aa17.38■□□□□ 0.37
SNCAIP-219ENST00000514467 GIGYF1O75420 1035 aaPredicted RBP17.37■□□□□ 0.37
SNCAIP-219ENST00000514467 SNRPA1P09661 255 aaKnown RBP17.37■□□□□ 0.37
SNCAIP-219ENST00000514467 DUSP27Q5VZP5 1158 aa17.37■□□□□ 0.37
SNCAIP-219ENST00000514467 DNAJC10Q8IXB1 793 aa17.37■□□□□ 0.37
SNCAIP-219ENST00000514467 CACNA1FO60840 1977 aa17.37■□□□□ 0.37
SNCAIP-219ENST00000514467 QSER1Q2KHR3 1735 aa17.36■□□□□ 0.37
SNCAIP-219ENST00000514467 EXOSC9Q06265 439 aaKnown RBP17.36■□□□□ 0.37
SNCAIP-219ENST00000514467 C8orf58Q8NAV2 365 aa17.36■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms