RNA–Protein interactions for RNA: ENST00000514422.1

LINC00955-202, long intergenic non-protein coding RNA 955, humanhuman

TSL 4 BASIC

Gene LINC00955, Length 1,502 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00955-202ENST00000514422 IL17REQ8NFR9 667 aa11.25□□□□□ -0.61
LINC00955-202ENST00000514422 ATG3Q9NT62 314 aa11.25□□□□□ -0.61
LINC00955-202ENST00000514422 MAP3K5Q99683 1374 aa11.25□□□□□ -0.61
LINC00955-202ENST00000514422 CASZ1Q86V15 1759 aa11.25□□□□□ -0.61
LINC00955-202ENST00000514422 RNMTO43148 476 aaKnown RBP11.25□□□□□ -0.61
LINC00955-202ENST00000514422 KCNA4P22459 653 aa11.25□□□□□ -0.61
LINC00955-202ENST00000514422 SLC4A9Q96Q91 983 aa11.25□□□□□ -0.61
LINC00955-202ENST00000514422 TMOD3Q9NYL9 352 aa11.25□□□□□ -0.61
LINC00955-202ENST00000514422 ERVV-2B6SEH9 535 aa11.24□□□□□ -0.61
LINC00955-202ENST00000514422 NFATC2IPQ8NCF5 419 aa11.24□□□□□ -0.61
LINC00955-202ENST00000514422 TJP1Q07157 1748 aa11.23□□□□□ -0.61
LINC00955-202ENST00000514422 HSP90AB1P08238 724 aaKnown RBP11.23□□□□□ -0.61
LINC00955-202ENST00000514422 CABP4P57796 275 aa11.23□□□□□ -0.61
LINC00955-202ENST00000514422 DCTN1Q14203 1278 aa11.23□□□□□ -0.61
LINC00955-202ENST00000514422 CCDC146Q8IYE0 955 aa11.23□□□□□ -0.61
LINC00955-202ENST00000514422 ADAMTS8Q9UP79 889 aa11.23□□□□□ -0.61
LINC00955-202ENST00000514422 UBR2Q8IWV8 1755 aa11.22□□□□□ -0.61
LINC00955-202ENST00000514422 COL5A3P25940 1745 aaPredicted RBP11.22□□□□□ -0.61
LINC00955-202ENST00000514422 ITPK1Q13572 414 aa11.22□□□□□ -0.61
LINC00955-202ENST00000514422 AMIGO3Q86WK7 504 aa11.22□□□□□ -0.61
LINC00955-202ENST00000514422 GAS2L2Q8NHY3 880 aa11.22□□□□□ -0.61
LINC00955-202ENST00000514422 AKT1S1Q96B36 256 aa11.22□□□□□ -0.61
LINC00955-202ENST00000514422 SLC52A2Q9HAB3 445 aa11.22□□□□□ -0.61
LINC00955-202ENST00000514422 CCNL1Q9UK58 526 aaPredicted RBP11.22□□□□□ -0.61
LINC00955-202ENST00000514422 KCPQ6ZWJ8 1503 aa11.22□□□□□ -0.61
LINC00955-202ENST00000514422 SRCAPQ6ZRS2 3230 aa11.22□□□□□ -0.61
LINC00955-202ENST00000514422 CEMIPQ8WUJ3 1361 aa11.22□□□□□ -0.61
LINC00955-202ENST00000514422 C4BP0C0L5 1744 aa11.22□□□□□ -0.61
LINC00955-202ENST00000514422 GNAT3A8MTJ3 354 aa11.21□□□□□ -0.61
LINC00955-202ENST00000514422 SLC39A6Q13433 755 aa11.21□□□□□ -0.61
LINC00955-202ENST00000514422 SMIM5Q71RC9 77 aa11.21□□□□□ -0.61
LINC00955-202ENST00000514422 MCM10Q7L590 875 aa11.21□□□□□ -0.61
LINC00955-202ENST00000514422 PNISRQ8TF01 805 aaKnown RBP11.21□□□□□ -0.61
LINC00955-202ENST00000514422 QSER1Q2KHR3 1735 aa11.21□□□□□ -0.61
LINC00955-202ENST00000514422 ZNF831Q5JPB2 1677 aa11.21□□□□□ -0.62
LINC00955-202ENST00000514422 UBR3Q6ZT12 1888 aa11.21□□□□□ -0.62
LINC00955-202ENST00000514422 MYH14Q7Z406 1995 aaKnown RBP11.21□□□□□ -0.62
LINC00955-202ENST00000514422 SENP3-EIF4A1A0A087X0R7 540 aa11.2□□□□□ -0.62
LINC00955-202ENST00000514422 LOC102724428A0A0B4J2F2 783 aa11.2□□□□□ -0.62
LINC00955-202ENST00000514422 SIK1P57059 783 aa11.2□□□□□ -0.62
LINC00955-202ENST00000514422 SLC15A2Q16348 729 aa11.2□□□□□ -0.62
LINC00955-202ENST00000514422 SLC27A3Q5K4L6 730 aa11.2□□□□□ -0.62
LINC00955-202ENST00000514422 LINC00116Q8NCU8 138 aa11.2□□□□□ -0.62
LINC00955-202ENST00000514422 THUMPD2Q9BTF0 503 aaKnown RBP11.2□□□□□ -0.62
LINC00955-202ENST00000514422 MRS2Q9HD23 443 aa11.2□□□□□ -0.62
LINC00955-202ENST00000514422 CICQ96RK0 1608 aaPredicted RBP11.2□□□□□ -0.62
LINC00955-202ENST00000514422 KCNQ3O43525 872 aa11.19□□□□□ -0.62
LINC00955-202ENST00000514422 RRP7AQ9Y3A4 280 aaKnown RBP11.19□□□□□ -0.62
LINC00955-202ENST00000514422 PTCD1O75127 700 aaKnown RBP11.19□□□□□ -0.62
LINC00955-202ENST00000514422 NFE2L2Q16236 605 aa11.19□□□□□ -0.62
LINC00955-202ENST00000514422 SMARCC1Q92922 1105 aaPredicted RBP11.19□□□□□ -0.62
LINC00955-202ENST00000514422 PNPLA7Q6ZV29 1317 aa11.18□□□□□ -0.62
LINC00955-202ENST00000514422 HOXD11P31277 338 aaPredicted RBP11.18□□□□□ -0.62
LINC00955-202ENST00000514422 NBPF14Q5TI25 921 aa11.18□□□□□ -0.62
LINC00955-202ENST00000514422 RBM42Q9BTD8 480 aaKnown RBP11.18□□□□□ -0.62
LINC00955-202ENST00000514422 RNF216Q9NWF9 866 aaPredicted RBP11.18□□□□□ -0.62
LINC00955-202ENST00000514422 STK32BQ9NY57 414 aa11.18□□□□□ -0.62
LINC00955-202ENST00000514422 KDM3BQ7LBC6 1761 aa11.18□□□□□ -0.62
LINC00955-202ENST00000514422 ATP6V1AP38606 617 aa11.17□□□□□ -0.62
LINC00955-202ENST00000514422 TMPOP42166 694 aaKnown RBP11.17□□□□□ -0.62
LINC00955-202ENST00000514422 WDR43Q15061 677 aaKnown RBP eCLIP11.17□□□□□ -0.62
LINC00955-202ENST00000514422 LRP5O75197 1615 aa11.16□□□□□ -0.62
LINC00955-202ENST00000514422 MAPK8IP3Q9UPT6 1336 aa11.16□□□□□ -0.62
LINC00955-202ENST00000514422 NPM3O75607 178 aaKnown RBP11.15□□□□□ -0.62
LINC00955-202ENST00000514422 TEFQ10587 303 aa11.15□□□□□ -0.62
LINC00955-202ENST00000514422 RUNDC1Q96C34 613 aa11.15□□□□□ -0.62
LINC00955-202ENST00000514422 ZNF496Q96IT1 587 aaPredicted RBP11.15□□□□□ -0.62
LINC00955-202ENST00000514422 MIS18AQ9NYP9 233 aa11.15□□□□□ -0.62
LINC00955-202ENST00000514422 TRIM35Q9UPQ4 493 aa11.15□□□□□ -0.62
LINC00955-202ENST00000514422 C4AP0C0L4 1744 aa11.15□□□□□ -0.62
LINC00955-202ENST00000514422 COL24A1Q17RW2 1714 aa11.15□□□□□ -0.62
LINC00955-202ENST00000514422 PRAMEF22A3QJZ6 481 aa11.14□□□□□ -0.63
LINC00955-202ENST00000514422 CCER2I3L3R5 266 aa11.14□□□□□ -0.63
LINC00955-202ENST00000514422 ZBTB7AO95365 584 aa11.14□□□□□ -0.63
LINC00955-202ENST00000514422 RIPK4P57078 832 aa11.14□□□□□ -0.63
LINC00955-202ENST00000514422 NEUROD2Q15784 382 aa11.14□□□□□ -0.63
LINC00955-202ENST00000514422 COL23A1Q86Y22 540 aaPredicted RBP11.14□□□□□ -0.63
LINC00955-202ENST00000514422 DNAJC10Q8IXB1 793 aa11.14□□□□□ -0.63
LINC00955-202ENST00000514422 FAM9BQ8IZU0 186 aa11.14□□□□□ -0.63
LINC00955-202ENST00000514422 APAF1O14727 1248 aa11.14□□□□□ -0.63
LINC00955-202ENST00000514422 HTATSF1O43719 755 aaKnown RBP11.14□□□□□ -0.63
LINC00955-202ENST00000514422 ZNF790Q6PG37 636 aa11.14□□□□□ -0.63
LINC00955-202ENST00000514422 RTF1Q92541 710 aaKnown RBP11.14□□□□□ -0.63
LINC00955-202ENST00000514422 TFCP2L1Q9NZI6 479 aa11.14□□□□□ -0.63
LINC00955-202ENST00000514422 BTBD11A6QL63 1104 aa11.13□□□□□ -0.63
LINC00955-202ENST00000514422 PHF14O94880 888 aa11.12□□□□□ -0.63
LINC00955-202ENST00000514422 NEFMP07197 916 aa11.12□□□□□ -0.63
LINC00955-202ENST00000514422 PTGER2P43116 358 aa11.12□□□□□ -0.63
LINC00955-202ENST00000514422 INTS5Q6P9B9 1019 aaKnown RBP11.12□□□□□ -0.63
LINC00955-202ENST00000514422 SGIP1Q9BQI5 828 aa11.12□□□□□ -0.63
LINC00955-202ENST00000514422 PNNQ9H307 717 aaKnown RBP11.12□□□□□ -0.63
LINC00955-202ENST00000514422 ATF5Q9Y2D1 282 aaPredicted RBP11.12□□□□□ -0.63
LINC00955-202ENST00000514422 CNTNAP4Q9C0A0 1308 aa11.12□□□□□ -0.63
LINC00955-202ENST00000514422 HEG1Q9ULI3 1381 aa11.12□□□□□ -0.63
LINC00955-202ENST00000514422 GNPATO15228 680 aa11.11□□□□□ -0.63
LINC00955-202ENST00000514422 CYP19A1P11511 503 aaPredicted RBP11.11□□□□□ -0.63
LINC00955-202ENST00000514422 CRKLP46109 303 aaKnown RBP11.11□□□□□ -0.63
LINC00955-202ENST00000514422 AK7Q96M32 723 aa11.11□□□□□ -0.63
LINC00955-202ENST00000514422 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.1□□□□□ -0.63
LINC00955-202ENST00000514422 TAF7Q15545 349 aaPredicted RBP11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms