RNA–Protein interactions for RNA: ENST00000514267.1

CALCOCO2-223, Transcript of calcium binding and coiled-coil domain 2, humanhuman

TSL 2

Gene CALCOCO2, Length 336 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-223ENST00000514267 NSFL1CQ9UNZ2 370 aaKnown RBP6.48□□□□□ -1.37
CALCOCO2-223ENST00000514267 PHF24Q9UPV7 400 aa6.48□□□□□ -1.37
CALCOCO2-223ENST00000514267 HRH3Q9Y5N1 445 aa6.48□□□□□ -1.37
CALCOCO2-223ENST00000514267 USP17L5A8MUK1 530 aa6.47□□□□□ -1.37
CALCOCO2-223ENST00000514267 GDF10P55107 478 aa6.47□□□□□ -1.37
CALCOCO2-223ENST00000514267 PPARGC1BQ86YN6 1023 aaKnown RBP6.47□□□□□ -1.37
CALCOCO2-223ENST00000514267 ETNK1Q9HBU6 452 aa6.47□□□□□ -1.37
CALCOCO2-223ENST00000514267 RAB6BQ9NRW1 208 aa6.47□□□□□ -1.37
CALCOCO2-223ENST00000514267 RBM19Q9Y4C8 960 aaKnown RBP6.47□□□□□ -1.37
CALCOCO2-223ENST00000514267 ATP9BO43861 1147 aa6.46□□□□□ -1.38
CALCOCO2-223ENST00000514267 PSME1Q06323 249 aa6.46□□□□□ -1.38
CALCOCO2-223ENST00000514267 POU4F2Q12837 409 aa6.46□□□□□ -1.38
CALCOCO2-223ENST00000514267 RIPOR1Q6ZS17 1223 aa6.46□□□□□ -1.38
CALCOCO2-223ENST00000514267 SLC4A9Q96Q91 983 aa6.46□□□□□ -1.38
CALCOCO2-223ENST00000514267 NIFKQ9BYG3 293 aaKnown RBP6.46□□□□□ -1.38
CALCOCO2-223ENST00000514267 FHDC1Q9C0D6 1143 aaPredicted RBP6.46□□□□□ -1.38
CALCOCO2-223ENST00000514267 RHOQP17081 205 aa6.45□□□□□ -1.38
CALCOCO2-223ENST00000514267 SMTNP53814 917 aa6.45□□□□□ -1.38
CALCOCO2-223ENST00000514267 GTF2IP78347 998 aa6.45□□□□□ -1.38
CALCOCO2-223ENST00000514267 NCOA4Q13772 614 aa6.45□□□□□ -1.38
CALCOCO2-223ENST00000514267 NBPF1Q3BBV0 1214 aa6.45□□□□□ -1.38
CALCOCO2-223ENST00000514267 EFHC2Q5JST6 749 aa6.45□□□□□ -1.38
CALCOCO2-223ENST00000514267 LCE2CQ5TA81 110 aa6.45□□□□□ -1.38
CALCOCO2-223ENST00000514267 HDGFL1Q5TGJ6 251 aa6.45□□□□□ -1.38
CALCOCO2-223ENST00000514267 TBC1D9Q6ZT07 1266 aa6.45□□□□□ -1.38
CALCOCO2-223ENST00000514267 VWA5B2Q8N398 1253 aa6.45□□□□□ -1.38
CALCOCO2-223ENST00000514267 FNBP4Q8N3X1 1017 aaPredicted RBP6.45□□□□□ -1.38
CALCOCO2-223ENST00000514267 GPC6Q9Y625 555 aaPredicted RBP6.45□□□□□ -1.38
CALCOCO2-223ENST00000514267 CDK2AP1O14519 115 aa6.44□□□□□ -1.38
CALCOCO2-223ENST00000514267 SCNN1DP51172 638 aa6.44□□□□□ -1.38
CALCOCO2-223ENST00000514267 FIGNL1Q6PIW4 674 aa6.44□□□□□ -1.38
CALCOCO2-223ENST00000514267 GAS2L1Q99501 681 aaPredicted RBP6.44□□□□□ -1.38
CALCOCO2-223ENST00000514267 COL25A1Q9BXS0 654 aaPredicted RBP6.44□□□□□ -1.38
CALCOCO2-223ENST00000514267 NUCKS1Q9H1E3 243 aaKnown RBP6.44□□□□□ -1.38
CALCOCO2-223ENST00000514267 USP17L3A6NCW0 530 aa6.43□□□□□ -1.38
CALCOCO2-223ENST00000514267 USP17L4A6NCW7 530 aa6.43□□□□□ -1.38
CALCOCO2-223ENST00000514267 RNF225M0QZC1 329 aaPredicted RBP6.43□□□□□ -1.38
CALCOCO2-223ENST00000514267 M0R2N6 131 aa6.43□□□□□ -1.38
CALCOCO2-223ENST00000514267 SLURP2P0DP57 97 aa6.43□□□□□ -1.38
CALCOCO2-223ENST00000514267 TATP17735 454 aaPredicted RBP6.43□□□□□ -1.38
CALCOCO2-223ENST00000514267 SRSF11Q05519 484 aaKnown RBP6.43□□□□□ -1.38
CALCOCO2-223ENST00000514267 MTFR1Q15390 333 aa6.43□□□□□ -1.38
CALCOCO2-223ENST00000514267 USP17L2Q6R6M4 530 aa6.43□□□□□ -1.38
CALCOCO2-223ENST00000514267 USP17L1Q7RTZ2 530 aa6.43□□□□□ -1.38
CALCOCO2-223ENST00000514267 LARGE2Q8N3Y3 721 aa6.43□□□□□ -1.38
CALCOCO2-223ENST00000514267 GLMNQ92990 594 aa6.43□□□□□ -1.38
CALCOCO2-223ENST00000514267 ZNF837Q96EG3 531 aaPredicted RBP6.43□□□□□ -1.38
CALCOCO2-223ENST00000514267 CFHR5Q9BXR6 569 aa6.43□□□□□ -1.38
CALCOCO2-223ENST00000514267 ENAMQ9NRM1 1142 aa6.43□□□□□ -1.38
CALCOCO2-223ENST00000514267 MBIPQ9NS73 344 aa6.43□□□□□ -1.38
CALCOCO2-223ENST00000514267 LRRC4BQ9NT99 713 aa6.43□□□□□ -1.38
CALCOCO2-223ENST00000514267 CHMP3Q9Y3E7 222 aa6.43□□□□□ -1.38
CALCOCO2-223ENST00000514267 PALM3A6NDB9 673 aaPredicted RBP6.42□□□□□ -1.38
CALCOCO2-223ENST00000514267 A6NJY4 79 aa6.42□□□□□ -1.38
CALCOCO2-223ENST00000514267 PIK3CDO00329 1044 aa6.42□□□□□ -1.38
CALCOCO2-223ENST00000514267 MAP3K10Q02779 954 aa6.42□□□□□ -1.38
CALCOCO2-223ENST00000514267 TSGA10IPQ3SY00 556 aa6.42□□□□□ -1.38
CALCOCO2-223ENST00000514267 C4orf17Q53FE4 359 aa6.42□□□□□ -1.38
CALCOCO2-223ENST00000514267 CALR3Q96L12 384 aaKnown RBP6.42□□□□□ -1.38
CALCOCO2-223ENST00000514267 ZDHHC3Q9NYG2 299 aa6.42□□□□□ -1.38
CALCOCO2-223ENST00000514267 PCDHGA11Q9Y5H2 935 aa6.42□□□□□ -1.38
CALCOCO2-223ENST00000514267 POM121CA8CG34 1229 aa6.41□□□□□ -1.38
CALCOCO2-223ENST00000514267 MAP2K3P46734 347 aa6.41□□□□□ -1.38
CALCOCO2-223ENST00000514267 NLRP8Q86W28 1048 aa6.41□□□□□ -1.38
CALCOCO2-223ENST00000514267 CNTNAP3BQ96NU0 1288 aa6.41□□□□□ -1.38
CALCOCO2-223ENST00000514267 CNTNAP3Q9BZ76 1288 aa6.41□□□□□ -1.38
CALCOCO2-223ENST00000514267 CRISPLD1Q9H336 500 aa6.41□□□□□ -1.38
CALCOCO2-223ENST00000514267 CLUAP1Q96AJ1 413 aa6.4□□□□□ -1.38
CALCOCO2-223ENST00000514267 DNAAF2Q9NVR5 837 aaKnown RBP6.4□□□□□ -1.38
CALCOCO2-223ENST00000514267 ATXN7L1Q9ULK2 861 aaPredicted RBP6.4□□□□□ -1.38
CALCOCO2-223ENST00000514267 TMEM229AB2RXF0 380 aa6.39□□□□□ -1.39
CALCOCO2-223ENST00000514267 MSX1P28360 303 aa6.39□□□□□ -1.39
CALCOCO2-223ENST00000514267 PLA2G4AP47712 749 aa6.39□□□□□ -1.39
CALCOCO2-223ENST00000514267 SIX5Q8N196 739 aa6.39□□□□□ -1.39
CALCOCO2-223ENST00000514267 GPR161Q8N6U8 529 aaKnown RBP6.39□□□□□ -1.39
CALCOCO2-223ENST00000514267 UCN2Q96RP3 112 aa6.39□□□□□ -1.39
CALCOCO2-223ENST00000514267 MX2P20592 715 aa6.38□□□□□ -1.39
CALCOCO2-223ENST00000514267 DBN1Q16643 649 aa6.38□□□□□ -1.39
CALCOCO2-223ENST00000514267 HIF1AQ16665 826 aa6.38□□□□□ -1.39
CALCOCO2-223ENST00000514267 LARP1Q6PKG0 1096 aaKnown RBP6.38□□□□□ -1.39
CALCOCO2-223ENST00000514267 SVOPQ8N4V2 548 aa6.38□□□□□ -1.39
CALCOCO2-223ENST00000514267 GAS2L2Q8NHY3 880 aa6.38□□□□□ -1.39
CALCOCO2-223ENST00000514267 ADAMTS19Q8TE59 1207 aa6.38□□□□□ -1.39
CALCOCO2-223ENST00000514267 GTPBP3Q969Y2 492 aaKnown RBP6.38□□□□□ -1.39
CALCOCO2-223ENST00000514267 ZNF358Q9NW07 568 aa6.38□□□□□ -1.39
CALCOCO2-223ENST00000514267 SCHIP1Q9P0W5 487 aaPredicted RBP6.38□□□□□ -1.39
CALCOCO2-223ENST00000514267 MKRN1Q9UHC7 482 aaKnown RBP6.38□□□□□ -1.39
CALCOCO2-223ENST00000514267 ADAMTS2O95450 1211 aa6.37□□□□□ -1.39
CALCOCO2-223ENST00000514267 PHKA2P46019 1235 aa6.37□□□□□ -1.39
CALCOCO2-223ENST00000514267 KRT76Q01546 638 aa6.37□□□□□ -1.39
CALCOCO2-223ENST00000514267 TEAD4Q15561 434 aa6.37□□□□□ -1.39
CALCOCO2-223ENST00000514267 CCDC102BQ68D86 513 aa6.37□□□□□ -1.39
CALCOCO2-223ENST00000514267 OGFOD1Q8N543 542 aa6.37□□□□□ -1.39
CALCOCO2-223ENST00000514267 TPCN2Q8NHX9 752 aa6.37□□□□□ -1.39
CALCOCO2-223ENST00000514267 PPP1R12CQ9BZL4 782 aa6.37□□□□□ -1.39
CALCOCO2-223ENST00000514267 GPAMQ9HCL2 828 aa6.37□□□□□ -1.39
CALCOCO2-223ENST00000514267 CUEDC1Q9NWM3 386 aaPredicted RBP6.37□□□□□ -1.39
CALCOCO2-223ENST00000514267 CABP1Q9NZU7 370 aa6.37□□□□□ -1.39
CALCOCO2-223ENST00000514267 SERTAD1Q9UHV2 236 aa6.37□□□□□ -1.39
CALCOCO2-223ENST00000514267 IQSEC3Q9UPP2 1182 aaPredicted RBP6.37□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms