RNA–Protein interactions for RNA: ENST00000513957.1

NEDD4-210, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 2

Gene NEDD4, Length 591 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-210ENST00000513957 TAF1LQ8IZX4 1826 aa10.97□□□□□ -0.65
NEDD4-210ENST00000513957 MYBBP1AQ9BQG0 1328 aaKnown RBP10.96□□□□□ -0.65
NEDD4-210ENST00000513957 PHKG2P15735 406 aa10.96□□□□□ -0.65
NEDD4-210ENST00000513957 C5P01031 1676 aa10.95□□□□□ -0.66
NEDD4-210ENST00000513957 CICQ96RK0 1608 aaPredicted RBP10.95□□□□□ -0.66
NEDD4-210ENST00000513957 MRC1P22897 1456 aa10.95□□□□□ -0.66
NEDD4-210ENST00000513957 EZH2Q15910 746 aaKnown RBP10.95□□□□□ -0.66
NEDD4-210ENST00000513957 C1orf141Q5JVX7 400 aa10.95□□□□□ -0.66
NEDD4-210ENST00000513957 SLC27A3Q5K4L6 730 aa10.95□□□□□ -0.66
NEDD4-210ENST00000513957 AEBP1Q8IUX7 1158 aa10.95□□□□□ -0.66
NEDD4-210ENST00000513957 ACSBG1Q96GR2 724 aa10.95□□□□□ -0.66
NEDD4-210ENST00000513957 DCAF5Q96JK2 942 aa10.95□□□□□ -0.66
NEDD4-210ENST00000513957 U2SURPO15042 1029 aaKnown RBP10.94□□□□□ -0.66
NEDD4-210ENST00000513957 KCNQ2O43526 872 aa10.94□□□□□ -0.66
NEDD4-210ENST00000513957 CNGB1Q14028 1251 aaPredicted RBP10.94□□□□□ -0.66
NEDD4-210ENST00000513957 NBPF14Q5TI25 921 aa10.94□□□□□ -0.66
NEDD4-210ENST00000513957 KLHL34Q8N239 644 aa10.94□□□□□ -0.66
NEDD4-210ENST00000513957 SIPA1L3O60292 1781 aaPredicted RBP10.94□□□□□ -0.66
NEDD4-210ENST00000513957 LRP5O75197 1615 aa10.94□□□□□ -0.66
NEDD4-210ENST00000513957 ERVV-2B6SEH9 535 aa10.93□□□□□ -0.66
NEDD4-210ENST00000513957 FCHSD2O94868 740 aa10.93□□□□□ -0.66
NEDD4-210ENST00000513957 PRIM1P49642 420 aaKnown RBP10.93□□□□□ -0.66
NEDD4-210ENST00000513957 AKAP4Q5JQC9 854 aa10.93□□□□□ -0.66
NEDD4-210ENST00000513957 ZNF530Q6P9A1 599 aaPredicted RBP10.93□□□□□ -0.66
NEDD4-210ENST00000513957 GAS2L2Q8NHY3 880 aa10.93□□□□□ -0.66
NEDD4-210ENST00000513957 SMARCC1Q92922 1105 aaPredicted RBP10.93□□□□□ -0.66
NEDD4-210ENST00000513957 SYTL4Q96C24 671 aaPredicted RBP10.93□□□□□ -0.66
NEDD4-210ENST00000513957 PNNQ9H307 717 aaKnown RBP10.93□□□□□ -0.66
NEDD4-210ENST00000513957 PRKRIP1Q9H875 184 aaPredicted RBP10.93□□□□□ -0.66
NEDD4-210ENST00000513957 DLG5Q8TDM6 1919 aa10.93□□□□□ -0.66
NEDD4-210ENST00000513957 KDM6AO15550 1401 aaPredicted RBP10.92□□□□□ -0.66
NEDD4-210ENST00000513957 HMOX1P09601 288 aa10.92□□□□□ -0.66
NEDD4-210ENST00000513957 TXNRD1Q16881 649 aa10.92□□□□□ -0.66
NEDD4-210ENST00000513957 U3KPZ7 1027 aaPredicted RBP10.92□□□□□ -0.66
NEDD4-210ENST00000513957 CASZ1Q86V15 1759 aa10.92□□□□□ -0.66
NEDD4-210ENST00000513957 UBR2Q8IWV8 1755 aa10.91□□□□□ -0.66
NEDD4-210ENST00000513957 NEFMP07197 916 aa10.91□□□□□ -0.66
NEDD4-210ENST00000513957 U2AF1L5P0DN76 240 aaPredicted RBP10.91□□□□□ -0.66
NEDD4-210ENST00000513957 U2AF1Q01081 240 aaKnown RBP eCLIP10.91□□□□□ -0.66
NEDD4-210ENST00000513957 PTF1AQ7RTS3 328 aa10.91□□□□□ -0.66
NEDD4-210ENST00000513957 RSPH6AQ9H0K4 717 aa10.91□□□□□ -0.66
NEDD4-210ENST00000513957 TMOD3Q9NYL9 352 aa10.91□□□□□ -0.66
NEDD4-210ENST00000513957 COL5A3P25940 1745 aaPredicted RBP10.91□□□□□ -0.66
NEDD4-210ENST00000513957 TUBGCP6Q96RT7 1819 aa10.91□□□□□ -0.66
NEDD4-210ENST00000513957 PALLDQ8WX93 1383 aa10.9□□□□□ -0.66
NEDD4-210ENST00000513957 MAP3K5Q99683 1374 aa10.9□□□□□ -0.66
NEDD4-210ENST00000513957 PRKAR2BP31323 418 aa10.89□□□□□ -0.67
NEDD4-210ENST00000513957 MKRN4PQ13434 485 aaPredicted RBP10.89□□□□□ -0.67
NEDD4-210ENST00000513957 MPRIPQ6WCQ1 1025 aa10.89□□□□□ -0.67
NEDD4-210ENST00000513957 C4BP0C0L5 1744 aa10.89□□□□□ -0.67
NEDD4-210ENST00000513957 MTHFSDQ2M296 383 aaKnown RBP10.88□□□□□ -0.67
NEDD4-210ENST00000513957 UBR3Q6ZT12 1888 aa10.88□□□□□ -0.67
NEDD4-210ENST00000513957 PIGBQ92521 554 aa10.88□□□□□ -0.67
NEDD4-210ENST00000513957 COL24A1Q17RW2 1714 aa10.87□□□□□ -0.67
NEDD4-210ENST00000513957 GNAT3A8MTJ3 354 aa10.87□□□□□ -0.67
NEDD4-210ENST00000513957 HTATSF1O43719 755 aaKnown RBP10.87□□□□□ -0.67
NEDD4-210ENST00000513957 CABP4P57796 275 aa10.87□□□□□ -0.67
NEDD4-210ENST00000513957 STK32BQ9NY57 414 aa10.87□□□□□ -0.67
NEDD4-210ENST00000513957 CCNL1Q9UK58 526 aaPredicted RBP10.87□□□□□ -0.67
NEDD4-210ENST00000513957 CEMIPQ8WUJ3 1361 aa10.87□□□□□ -0.67
NEDD4-210ENST00000513957 RGL2O15211 777 aa10.86□□□□□ -0.67
NEDD4-210ENST00000513957 RNMTO43148 476 aaKnown RBP10.86□□□□□ -0.67
NEDD4-210ENST00000513957 ANP32CO43423 234 aa10.86□□□□□ -0.67
NEDD4-210ENST00000513957 SLC52A2Q9HAB3 445 aa10.86□□□□□ -0.67
NEDD4-210ENST00000513957 TJP1Q07157 1748 aa10.86□□□□□ -0.67
NEDD4-210ENST00000513957 MAPK8IP3Q9UPT6 1336 aa10.85□□□□□ -0.67
NEDD4-210ENST00000513957 CAPN15O75808 1086 aa10.85□□□□□ -0.67
NEDD4-210ENST00000513957 R3HDM1Q15032 1099 aaKnown RBP10.85□□□□□ -0.67
NEDD4-210ENST00000513957 WDR43Q15061 677 aaKnown RBP eCLIP10.85□□□□□ -0.67
NEDD4-210ENST00000513957 SLC15A2Q16348 729 aa10.85□□□□□ -0.67
NEDD4-210ENST00000513957 PLEKHF1Q96S99 279 aa10.85□□□□□ -0.67
NEDD4-210ENST00000513957 ANO8Q9HCE9 1232 aaPredicted RBP10.85□□□□□ -0.67
NEDD4-210ENST00000513957 LRRC4BQ9NT99 713 aa10.85□□□□□ -0.67
NEDD4-210ENST00000513957 LOC102724428A0A0B4J2F2 783 aa10.84□□□□□ -0.67
NEDD4-210ENST00000513957 SIK1P57059 783 aa10.84□□□□□ -0.67
NEDD4-210ENST00000513957 RTF1Q92541 710 aaKnown RBP10.84□□□□□ -0.67
NEDD4-210ENST00000513957 AKT1S1Q96B36 256 aa10.84□□□□□ -0.67
NEDD4-210ENST00000513957 PHACTR3Q96KR7 559 aa10.84□□□□□ -0.67
NEDD4-210ENST00000513957 ATG3Q9NT62 314 aa10.84□□□□□ -0.67
NEDD4-210ENST00000513957 KDM3BQ7LBC6 1761 aa10.84□□□□□ -0.67
NEDD4-210ENST00000513957 KCPQ6ZWJ8 1503 aa10.84□□□□□ -0.67
NEDD4-210ENST00000513957 TEFQ10587 303 aa10.83□□□□□ -0.68
NEDD4-210ENST00000513957 NFATC2IPQ8NCF5 419 aa10.83□□□□□ -0.68
NEDD4-210ENST00000513957 FLAD1Q8NFF5 587 aa10.83□□□□□ -0.68
NEDD4-210ENST00000513957 SPINK5Q9NQ38 1064 aaPredicted RBP10.83□□□□□ -0.68
NEDD4-210ENST00000513957 ASAP1Q9ULH1 1129 aa10.83□□□□□ -0.68
NEDD4-210ENST00000513957 LAMB4A4D0S4 1761 aa10.82□□□□□ -0.68
NEDD4-210ENST00000513957 LMOD3Q0VAK6 560 aa10.82□□□□□ -0.68
NEDD4-210ENST00000513957 SLC16A10Q8TF71 515 aa10.82□□□□□ -0.68
NEDD4-210ENST00000513957 LGR6Q9HBX8 967 aa10.82□□□□□ -0.68
NEDD4-210ENST00000513957 MYH14Q7Z406 1995 aaKnown RBP10.81□□□□□ -0.68
NEDD4-210ENST00000513957 PSDA5PKW4 1024 aaPredicted RBP10.81□□□□□ -0.68
NEDD4-210ENST00000513957 NFE2L2Q16236 605 aa10.81□□□□□ -0.68
NEDD4-210ENST00000513957 CNTNAP4Q9C0A0 1308 aa10.81□□□□□ -0.68
NEDD4-210ENST00000513957 C4AP0C0L4 1744 aa10.81□□□□□ -0.68
NEDD4-210ENST00000513957 SSFA2P28290 1259 aa10.8□□□□□ -0.68
NEDD4-210ENST00000513957 ATP6V1AP38606 617 aa10.8□□□□□ -0.68
NEDD4-210ENST00000513957 ZNF827Q17R98 1081 aa10.8□□□□□ -0.68
NEDD4-210ENST00000513957 RC3H1Q5TC82 1133 aaKnown RBP10.8□□□□□ -0.68
NEDD4-210ENST00000513957 TTC5Q8N0Z6 440 aa10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms