RNA–Protein interactions for RNA: ENST00000513725.1

SFXN1-210, Transcript of sideroflexin 1, humanhuman

TSL 2

Gene SFXN1, Length 597 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-210ENST00000513725 USP31Q70CQ4 1352 aa17.21■□□□□ 0.35
SFXN1-210ENST00000513725 KDM6AO15550 1401 aaPredicted RBP17.21■□□□□ 0.34
SFXN1-210ENST00000513725 KTN1Q86UP2 1357 aaKnown RBP17.2■□□□□ 0.34
SFXN1-210ENST00000513725 POTECB2RU33 542 aa17.2■□□□□ 0.34
SFXN1-210ENST00000513725 RASSF7Q02833 373 aa17.2■□□□□ 0.34
SFXN1-210ENST00000513725 DPY19L2Q6NUT2 758 aa17.2■□□□□ 0.34
SFXN1-210ENST00000513725 LINC00116Q8NCU8 138 aa17.2■□□□□ 0.34
SFXN1-210ENST00000513725 C4AP0C0L4 1744 aa17.2■□□□□ 0.34
SFXN1-210ENST00000513725 IP6K1Q92551 441 aa17.19■□□□□ 0.34
SFXN1-210ENST00000513725 MEGF6O75095 1541 aa17.18■□□□□ 0.34
SFXN1-210ENST00000513725 TMEM88BA6NKF7 163 aa17.18■□□□□ 0.34
SFXN1-210ENST00000513725 TRAPPC3LQ5T215 181 aa17.18■□□□□ 0.34
SFXN1-210ENST00000513725 PRPF38BQ5VTL8 546 aaKnown RBP17.18■□□□□ 0.34
SFXN1-210ENST00000513725 CGNL1Q0VF96 1302 aa17.18■□□□□ 0.34
SFXN1-210ENST00000513725 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.17■□□□□ 0.34
SFXN1-210ENST00000513725 EVC2Q86UK5 1308 aa17.17■□□□□ 0.34
SFXN1-210ENST00000513725 LOC102724428A0A0B4J2F2 783 aa17.16■□□□□ 0.34
SFXN1-210ENST00000513725 SIK1P57059 783 aa17.16■□□□□ 0.34
SFXN1-210ENST00000513725 BEGAINQ9BUH8 593 aa17.16■□□□□ 0.34
SFXN1-210ENST00000513725 PASKQ96RG2 1323 aa17.16■□□□□ 0.34
SFXN1-210ENST00000513725 RTCBQ9Y3I0 505 aaKnown RBP17.15■□□□□ 0.34
SFXN1-210ENST00000513725 TIAM2Q8IVF5 1701 aa17.14■□□□□ 0.33
SFXN1-210ENST00000513725 CHRNA5P30532 468 aa17.13■□□□□ 0.33
SFXN1-210ENST00000513725 DEFB115Q30KQ5 88 aa17.13■□□□□ 0.33
SFXN1-210ENST00000513725 NME9Q86XW9 330 aa17.13■□□□□ 0.33
SFXN1-210ENST00000513725 PCDH11XQ9BZA7 1347 aa17.13■□□□□ 0.33
SFXN1-210ENST00000513725 PCDH11YQ9BZA8 1340 aa17.13■□□□□ 0.33
SFXN1-210ENST00000513725 RASSF10A6NK89 507 aa17.12■□□□□ 0.33
SFXN1-210ENST00000513725 GYS1P13807 737 aa17.12■□□□□ 0.33
SFXN1-210ENST00000513725 RAPGEF4Q8WZA2 1011 aa17.12■□□□□ 0.33
SFXN1-210ENST00000513725 MCOLN1Q9GZU1 580 aa17.12■□□□□ 0.33
SFXN1-210ENST00000513725 WDR33Q9C0J8 1336 aaKnown RBP17.12■□□□□ 0.33
SFXN1-210ENST00000513725 POTEIP0CG38 1075 aa17.11■□□□□ 0.33
SFXN1-210ENST00000513725 POTEJP0CG39 1038 aa17.11■□□□□ 0.33
SFXN1-210ENST00000513725 ATP6V1AP38606 617 aa17.11■□□□□ 0.33
SFXN1-210ENST00000513725 NBPF1Q3BBV0 1214 aa17.11■□□□□ 0.33
SFXN1-210ENST00000513725 MAP2P11137 1827 aaKnown RBP17.11■□□□□ 0.33
SFXN1-210ENST00000513725 ADRA2BP18089 450 aa17.1■□□□□ 0.33
SFXN1-210ENST00000513725 RFC4P35249 363 aa17.1■□□□□ 0.33
SFXN1-210ENST00000513725 ITPK1Q13572 414 aa17.1■□□□□ 0.33
SFXN1-210ENST00000513725 PIGBQ92521 554 aa17.1■□□□□ 0.33
SFXN1-210ENST00000513725 MON2Q7Z3U7 1717 aa17.1■□□□□ 0.33
SFXN1-210ENST00000513725 ITGB4P16144 1822 aa17.1■□□□□ 0.33
SFXN1-210ENST00000513725 TATP17735 454 aaPredicted RBP17.09■□□□□ 0.33
SFXN1-210ENST00000513725 LDHDQ86WU2 507 aa17.09■□□□□ 0.33
SFXN1-210ENST00000513725 ARHGEF1Q92888 912 aaKnown RBP17.09■□□□□ 0.33
SFXN1-210ENST00000513725 CCDC88AQ3V6T2 1871 aa17.07■□□□□ 0.32
SFXN1-210ENST00000513725 RGPD2P0DJD1 1756 aa17.07■□□□□ 0.32
SFXN1-210ENST00000513725 CD163L1Q9NR16 1453 aa17.07■□□□□ 0.32
SFXN1-210ENST00000513725 HOXC9P31274 260 aa17.06■□□□□ 0.32
SFXN1-210ENST00000513725 IQCA1LA6NCM1 817 aa17.05■□□□□ 0.32
SFXN1-210ENST00000513725 ITGBL1O95965 494 aaPredicted RBP17.05■□□□□ 0.32
SFXN1-210ENST00000513725 AMPHP49418 695 aa17.05■□□□□ 0.32
SFXN1-210ENST00000513725 ERFEQ4G0M1 354 aa17.04■□□□□ 0.32
SFXN1-210ENST00000513725 NBPF6Q5VWK0 638 aa17.04■□□□□ 0.32
SFXN1-210ENST00000513725 GCC1Q96CN9 775 aa17.04■□□□□ 0.32
SFXN1-210ENST00000513725 NBPF4Q96M43 638 aa17.04■□□□□ 0.32
SFXN1-210ENST00000513725 ABT1Q9ULW3 272 aaKnown RBP17.04■□□□□ 0.32
SFXN1-210ENST00000513725 SBNO2Q9Y2G9 1366 aa17.03■□□□□ 0.32
SFXN1-210ENST00000513725 CYP27B1O15528 508 aa17.03■□□□□ 0.32
SFXN1-210ENST00000513725 DGKZQ13574 1117 aa17.03■□□□□ 0.32
SFXN1-210ENST00000513725 USHBP1Q8N6Y0 703 aa17.03■□□□□ 0.32
SFXN1-210ENST00000513725 NFKBIEO00221 500 aa17.02■□□□□ 0.32
SFXN1-210ENST00000513725 ECE1P42892 770 aa17.02■□□□□ 0.32
SFXN1-210ENST00000513725 RC3H1Q5TC82 1133 aaKnown RBP17.02■□□□□ 0.32
SFXN1-210ENST00000513725 TMOD3Q9NYL9 352 aa17.02■□□□□ 0.32
SFXN1-210ENST00000513725 TTLL6Q8N841 843 aa17.01■□□□□ 0.31
SFXN1-210ENST00000513725 TSKSQ9UJT2 592 aa17.01■□□□□ 0.31
SFXN1-210ENST00000513725 ASAP1Q9ULH1 1129 aa17.01■□□□□ 0.31
SFXN1-210ENST00000513725 MAP3K19Q56UN5 1328 aa17■□□□□ 0.31
SFXN1-210ENST00000513725 RPS6KA4O75676 772 aa17■□□□□ 0.31
SFXN1-210ENST00000513725 DDNO94850 711 aaPredicted RBP17■□□□□ 0.31
SFXN1-210ENST00000513725 DDR1Q08345 913 aa17■□□□□ 0.31
SFXN1-210ENST00000513725 ZNF219Q9P2Y4 722 aaPredicted RBP17■□□□□ 0.31
SFXN1-210ENST00000513725 THSD7BQ9C0I4 1608 aa16.99■□□□□ 0.31
SFXN1-210ENST00000513725 SMG6Q86US8 1419 aaKnown RBP16.99■□□□□ 0.31
SFXN1-210ENST00000513725 CA12O43570 354 aa16.99■□□□□ 0.31
SFXN1-210ENST00000513725 SOX10P56693 466 aa16.99■□□□□ 0.31
SFXN1-210ENST00000513725 PAXIP1Q6ZW49 1069 aaPredicted RBP16.99■□□□□ 0.31
SFXN1-210ENST00000513725 GPR101Q96P66 508 aaPredicted RBP16.99■□□□□ 0.31
SFXN1-210ENST00000513725 TAF1DQ9H5J8 278 aaPredicted RBP16.99■□□□□ 0.31
SFXN1-210ENST00000513725 CLEC11AQ9Y240 323 aa16.99■□□□□ 0.31
SFXN1-210ENST00000513725 FKBP8Q14318 412 aa16.98■□□□□ 0.31
SFXN1-210ENST00000513725 HDGFL2Q7Z4V5 671 aaPredicted RBP16.98■□□□□ 0.31
SFXN1-210ENST00000513725 CAPNS2Q96L46 248 aa16.98■□□□□ 0.31
SFXN1-210ENST00000513725 CNTNAP4Q9C0A0 1308 aa16.97■□□□□ 0.31
SFXN1-210ENST00000513725 EDC4Q6P2E9 1401 aaKnown RBP16.97■□□□□ 0.31
SFXN1-210ENST00000513725 NKX1-1Q15270 411 aaPredicted RBP16.97■□□□□ 0.31
SFXN1-210ENST00000513725 EAPPQ56P03 285 aaPredicted RBP16.97■□□□□ 0.31
SFXN1-210ENST00000513725 DICER1Q9UPY3 1922 aaKnown RBP16.97■□□□□ 0.31
SFXN1-210ENST00000513725 GRM1Q13255 1194 aa16.96■□□□□ 0.31
SFXN1-210ENST00000513725 SCN4AP35499 1836 aa16.96■□□□□ 0.3
SFXN1-210ENST00000513725 POLRMTO00411 1230 aaKnown RBP16.95■□□□□ 0.3
SFXN1-210ENST00000513725 CNTROBQ8N137 903 aa16.95■□□□□ 0.3
SFXN1-210ENST00000513725 ATG3Q9NT62 314 aa16.95■□□□□ 0.3
SFXN1-210ENST00000513725 CASP8AP2Q9UKL3 1982 aa16.95■□□□□ 0.3
SFXN1-210ENST00000513725 RTL1A6NKG5 1358 aa16.94■□□□□ 0.3
SFXN1-210ENST00000513725 MAP2K2P36507 400 aa16.94■□□□□ 0.3
SFXN1-210ENST00000513725 L3MBTL3Q96JM7 780 aaPredicted RBP16.94■□□□□ 0.3
SFXN1-210ENST00000513725 SRP68Q9UHB9 627 aaKnown RBP16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms