RNA–Protein interactions for RNA: ENST00000513410.1

COPG1-207, Transcript of coatomer protein complex subunit gamma 1, humanhuman

TSL 2

Gene COPG1, Length 545 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPG1-207ENST00000513410 VIRMAQ69YN4 1812 aaKnown RBP17.36■□□□□ 0.37
COPG1-207ENST00000513410 CHL1O00533 1208 aa17.36■□□□□ 0.37
COPG1-207ENST00000513410 TSR2Q969E8 191 aaKnown RBP17.36■□□□□ 0.37
COPG1-207ENST00000513410 SPINK5Q9NQ38 1064 aaPredicted RBP17.36■□□□□ 0.37
COPG1-207ENST00000513410 MIS18AQ9NYP9 233 aa17.36■□□□□ 0.37
COPG1-207ENST00000513410 ZNF853P0CG23 659 aa17.35■□□□□ 0.37
COPG1-207ENST00000513410 TTC5Q8N0Z6 440 aa17.35■□□□□ 0.37
COPG1-207ENST00000513410 ACSBG1Q96GR2 724 aa17.35■□□□□ 0.37
COPG1-207ENST00000513410 MBIPQ9NS73 344 aa17.35■□□□□ 0.37
COPG1-207ENST00000513410 PRIM1P49642 420 aaKnown RBP17.34■□□□□ 0.37
COPG1-207ENST00000513410 DUSP27Q5VZP5 1158 aa17.34■□□□□ 0.37
COPG1-207ENST00000513410 FANCIQ9NVI1 1328 aa17.34■□□□□ 0.37
COPG1-207ENST00000513410 FAM196AQ6ZSG2 479 aa17.33■□□□□ 0.36
COPG1-207ENST00000513410 TRMT2AQ8IZ69 625 aaKnown RBP17.33■□□□□ 0.36
COPG1-207ENST00000513410 FAM182BQ5T319 152 aa17.32■□□□□ 0.36
COPG1-207ENST00000513410 ADAMTS7Q9UKP4 1686 aa17.32■□□□□ 0.36
COPG1-207ENST00000513410 EXOSC9Q06265 439 aaKnown RBP17.31■□□□□ 0.36
COPG1-207ENST00000513410 SLC39A6Q13433 755 aa17.3■□□□□ 0.36
COPG1-207ENST00000513410 ZNF790Q6PG37 636 aa17.3■□□□□ 0.36
COPG1-207ENST00000513410 PIGBQ92521 554 aa17.3■□□□□ 0.36
COPG1-207ENST00000513410 MRC1P22897 1456 aa17.3■□□□□ 0.36
COPG1-207ENST00000513410 BRWD3Q6RI45 1802 aa17.29■□□□□ 0.36
COPG1-207ENST00000513410 RGS12O14924 1447 aa17.29■□□□□ 0.36
COPG1-207ENST00000513410 DOT1LQ8TEK3 1739 aa17.28■□□□□ 0.36
COPG1-207ENST00000513410 ELL2O00472 640 aaPredicted RBP17.28■□□□□ 0.36
COPG1-207ENST00000513410 CHMP4AQ9BY43 222 aa17.28■□□□□ 0.36
COPG1-207ENST00000513410 ITGB4P16144 1822 aa17.28■□□□□ 0.36
COPG1-207ENST00000513410 KCNQ3O43525 872 aa17.27■□□□□ 0.36
COPG1-207ENST00000513410 CT47B1P0C2W7 299 aaPredicted RBP17.27■□□□□ 0.36
COPG1-207ENST00000513410 TWISTNBQ3B726 338 aaPredicted RBP17.27■□□□□ 0.36
COPG1-207ENST00000513410 SMARCC1Q92922 1105 aaPredicted RBP17.27■□□□□ 0.36
COPG1-207ENST00000513410 FMNL2Q96PY5 1086 aa17.27■□□□□ 0.36
COPG1-207ENST00000513410 SIPA1L3O60292 1781 aaPredicted RBP17.27■□□□□ 0.35
COPG1-207ENST00000513410 TOGARAM1Q9Y4F4 1720 aa17.27■□□□□ 0.35
COPG1-207ENST00000513410 KCNQ2O43526 872 aa17.26■□□□□ 0.35
COPG1-207ENST00000513410 EIF4A1P60842 406 aaKnown RBP17.26■□□□□ 0.35
COPG1-207ENST00000513410 RBM42Q9BTD8 480 aaKnown RBP17.26■□□□□ 0.35
COPG1-207ENST00000513410 BCL9O00512 1426 aa17.26■□□□□ 0.35
COPG1-207ENST00000513410 PTCD1O75127 700 aaKnown RBP17.25■□□□□ 0.35
COPG1-207ENST00000513410 C8orf58Q8NAV2 365 aa17.25■□□□□ 0.35
COPG1-207ENST00000513410 ATG3Q9NT62 314 aa17.25■□□□□ 0.35
COPG1-207ENST00000513410 RCAN3Q9UKA8 241 aa17.25■□□□□ 0.35
COPG1-207ENST00000513410 ASAP1Q9ULH1 1129 aa17.25■□□□□ 0.35
COPG1-207ENST00000513410 SOS1Q07889 1333 aaPredicted RBP17.24■□□□□ 0.35
COPG1-207ENST00000513410 BCL11BQ9C0K0 894 aaPredicted RBP17.24■□□□□ 0.35
COPG1-207ENST00000513410 KDM3BQ7LBC6 1761 aa17.23■□□□□ 0.35
COPG1-207ENST00000513410 SNRPA1P09661 255 aaKnown RBP17.23■□□□□ 0.35
COPG1-207ENST00000513410 KRT24Q2M2I5 525 aa17.23■□□□□ 0.35
COPG1-207ENST00000513410 TSPYL6Q8N831 410 aa17.23■□□□□ 0.35
COPG1-207ENST00000513410 ZNF428Q96B54 188 aa17.23■□□□□ 0.35
COPG1-207ENST00000513410 ZNF496Q96IT1 587 aaPredicted RBP17.23■□□□□ 0.35
COPG1-207ENST00000513410 VAMP4O75379 141 aa17.22■□□□□ 0.35
COPG1-207ENST00000513410 TRIM37O94972 964 aa17.22■□□□□ 0.35
COPG1-207ENST00000513410 HOXB7P09629 217 aa17.22■□□□□ 0.35
COPG1-207ENST00000513410 EIF2S2P20042 333 aaKnown RBP17.21■□□□□ 0.35
COPG1-207ENST00000513410 CCDC30Q5VVM6 783 aa17.21■□□□□ 0.35
COPG1-207ENST00000513410 STK31Q9BXU1 1019 aa17.21■□□□□ 0.35
COPG1-207ENST00000513410 TEX13AQ9BXU3 409 aaPredicted RBP17.21■□□□□ 0.35
COPG1-207ENST00000513410 GIGYF1O75420 1035 aaPredicted RBP17.2■□□□□ 0.34
COPG1-207ENST00000513410 HDGFL1Q5TGJ6 251 aa17.2■□□□□ 0.34
COPG1-207ENST00000513410 NHSQ6T4R5 1651 aa17.2■□□□□ 0.34
COPG1-207ENST00000513410 SBF2Q86WG5 1849 aa17.19■□□□□ 0.34
COPG1-207ENST00000513410 PALLDQ8WX93 1383 aa17.19■□□□□ 0.34
COPG1-207ENST00000513410 HEG1Q9ULI3 1381 aa17.19■□□□□ 0.34
COPG1-207ENST00000513410 VSIG10Q8N0Z9 540 aa17.19■□□□□ 0.34
COPG1-207ENST00000513410 NECTIN2Q92692 538 aa17.19■□□□□ 0.34
COPG1-207ENST00000513410 SMC4Q9NTJ3 1288 aa17.19■□□□□ 0.34
COPG1-207ENST00000513410 ALDH1L2Q3SY69 923 aa17.18■□□□□ 0.34
COPG1-207ENST00000513410 LOC102724428A0A0B4J2F2 783 aa17.17■□□□□ 0.34
COPG1-207ENST00000513410 TCERG1O14776 1098 aaKnown RBP17.17■□□□□ 0.34
COPG1-207ENST00000513410 STARD3NLO95772 234 aa17.17■□□□□ 0.34
COPG1-207ENST00000513410 CANXP27824 592 aaKnown RBP17.17■□□□□ 0.34
COPG1-207ENST00000513410 ATP6V1AP38606 617 aa17.17■□□□□ 0.34
COPG1-207ENST00000513410 RARSP54136 660 aaKnown RBP17.17■□□□□ 0.34
COPG1-207ENST00000513410 SIK1P57059 783 aa17.17■□□□□ 0.34
COPG1-207ENST00000513410 SF3B2Q13435 895 aaKnown RBP17.17■□□□□ 0.34
COPG1-207ENST00000513410 PTF1AQ7RTS3 328 aa17.17■□□□□ 0.34
COPG1-207ENST00000513410 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.17■□□□□ 0.34
COPG1-207ENST00000513410 BTAF1O14981 1849 aa17.17■□□□□ 0.34
COPG1-207ENST00000513410 APBA3O96018 575 aa17.16■□□□□ 0.34
COPG1-207ENST00000513410 SSH1Q8WYL5 1049 aa17.16■□□□□ 0.34
COPG1-207ENST00000513410 BCL2L13Q9BXK5 485 aa17.16■□□□□ 0.34
COPG1-207ENST00000513410 PAPPAQ13219 1627 aa17.16■□□□□ 0.34
COPG1-207ENST00000513410 HMGB2P26583 209 aaKnown RBP17.15■□□□□ 0.34
COPG1-207ENST00000513410 SUPT16HQ9Y5B9 1047 aaKnown RBP17.15■□□□□ 0.34
COPG1-207ENST00000513410 USP16Q9Y5T5 823 aa17.15■□□□□ 0.34
COPG1-207ENST00000513410 KCPQ6ZWJ8 1503 aa17.15■□□□□ 0.34
COPG1-207ENST00000513410 PRAMEF22A3QJZ6 481 aa17.14■□□□□ 0.33
COPG1-207ENST00000513410 BCAR3O75815 825 aa17.14■□□□□ 0.33
COPG1-207ENST00000513410 SLC4A2P04920 1241 aa17.14■□□□□ 0.33
COPG1-207ENST00000513410 DNAJC10Q8IXB1 793 aa17.14■□□□□ 0.33
COPG1-207ENST00000513410 DBF4Q9UBU7 674 aaPredicted RBP17.14■□□□□ 0.33
COPG1-207ENST00000513410 UBR2Q8IWV8 1755 aa17.14■□□□□ 0.33
COPG1-207ENST00000513410 IPO8O15397 1037 aaKnown RBP17.13■□□□□ 0.33
COPG1-207ENST00000513410 NPM2Q86SE8 214 aaKnown RBP17.13■□□□□ 0.33
COPG1-207ENST00000513410 FRAT1Q92837 279 aaPredicted RBP17.13■□□□□ 0.33
COPG1-207ENST00000513410 CCNL1Q9UK58 526 aaPredicted RBP17.13■□□□□ 0.33
COPG1-207ENST00000513410 MRPL50Q8N5N7 158 aaKnown RBP17.11■□□□□ 0.33
COPG1-207ENST00000513410 HYPKQ9NX55 129 aa17.11■□□□□ 0.33
COPG1-207ENST00000513410 CHPF2Q9P2E5 772 aa17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms