RNA–Protein interactions for RNA: ENST00000513243.5

DDR1-272, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 5

Gene DDR1, Length 549 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-272ENST00000513243 SCN11AQ9UI33 1791 aa23.73■■□□□ 1.39
DDR1-272ENST00000513243 FCHSD2O94868 740 aa23.72■■□□□ 1.39
DDR1-272ENST00000513243 GAS2L2Q8NHY3 880 aa23.72■■□□□ 1.39
DDR1-272ENST00000513243 TAF1LQ8IZX4 1826 aa23.71■■□□□ 1.39
DDR1-272ENST00000513243 ATP6V1AP38606 617 aa23.71■■□□□ 1.39
DDR1-272ENST00000513243 ITPK1Q13572 414 aa23.71■■□□□ 1.39
DDR1-272ENST00000513243 MTFR1LQ9H019 292 aa23.71■■□□□ 1.39
DDR1-272ENST00000513243 SLC52A2Q9HAB3 445 aa23.71■■□□□ 1.39
DDR1-272ENST00000513243 PTGER2P43116 358 aa23.7■■□□□ 1.38
DDR1-272ENST00000513243 LINC00116Q8NCU8 138 aa23.7■■□□□ 1.38
DDR1-272ENST00000513243 SLC4A9Q96Q91 983 aa23.7■■□□□ 1.38
DDR1-272ENST00000513243 QSER1Q2KHR3 1735 aa23.7■■□□□ 1.38
DDR1-272ENST00000513243 TUBGCP6Q96RT7 1819 aa23.69■■□□□ 1.38
DDR1-272ENST00000513243 RBM42Q9BTD8 480 aaKnown RBP23.69■■□□□ 1.38
DDR1-272ENST00000513243 MAP3K5Q99683 1374 aa23.68■■□□□ 1.38
DDR1-272ENST00000513243 ADAMTS7Q9UKP4 1686 aa23.68■■□□□ 1.38
DDR1-272ENST00000513243 GNAT3A8MTJ3 354 aa23.68■■□□□ 1.38
DDR1-272ENST00000513243 COL23A1Q86Y22 540 aaPredicted RBP23.68■■□□□ 1.38
DDR1-272ENST00000513243 C4BP0C0L5 1744 aa23.67■■□□□ 1.38
DDR1-272ENST00000513243 IL17REQ8NFR9 667 aa23.67■■□□□ 1.38
DDR1-272ENST00000513243 SLC16A10Q8TF71 515 aa23.67■■□□□ 1.38
DDR1-272ENST00000513243 PPP1R1BQ9UD71 204 aaPredicted RBP23.67■■□□□ 1.38
DDR1-272ENST00000513243 MRC1P22897 1456 aa23.67■■□□□ 1.38
DDR1-272ENST00000513243 MYBBP1AQ9BQG0 1328 aaKnown RBP23.66■■□□□ 1.38
DDR1-272ENST00000513243 PTCD1O75127 700 aaKnown RBP23.66■■□□□ 1.38
DDR1-272ENST00000513243 AMIGO3Q86WK7 504 aa23.66■■□□□ 1.38
DDR1-272ENST00000513243 AK7Q96M32 723 aa23.66■■□□□ 1.38
DDR1-272ENST00000513243 SGIP1Q9BQI5 828 aa23.66■■□□□ 1.38
DDR1-272ENST00000513243 ZNF316A6NFI3 1004 aaPredicted RBP23.64■■□□□ 1.37
DDR1-272ENST00000513243 SMIM5Q71RC9 77 aa23.64■■□□□ 1.37
DDR1-272ENST00000513243 MSH5O43196 834 aa23.63■■□□□ 1.37
DDR1-272ENST00000513243 SLC39A6Q13433 755 aa23.63■■□□□ 1.37
DDR1-272ENST00000513243 PRKRIP1Q9H875 184 aaPredicted RBP23.63■■□□□ 1.37
DDR1-272ENST00000513243 VIRMAQ69YN4 1812 aaKnown RBP23.63■■□□□ 1.37
DDR1-272ENST00000513243 FLAD1Q8NFF5 587 aa23.62■■□□□ 1.37
DDR1-272ENST00000513243 ZNF831Q5JPB2 1677 aa23.62■■□□□ 1.37
DDR1-272ENST00000513243 PLEKHF1Q96S99 279 aa23.61■■□□□ 1.37
DDR1-272ENST00000513243 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP23.6■■□□□ 1.37
DDR1-272ENST00000513243 GNPATO15228 680 aa23.6■■□□□ 1.37
DDR1-272ENST00000513243 PHF14O94880 888 aa23.6■■□□□ 1.37
DDR1-272ENST00000513243 TEFQ10587 303 aa23.6■■□□□ 1.37
DDR1-272ENST00000513243 CEMIPQ8WUJ3 1361 aa23.6■■□□□ 1.37
DDR1-272ENST00000513243 UBR3Q6ZT12 1888 aa23.59■■□□□ 1.37
DDR1-272ENST00000513243 SSFA2P28290 1259 aa23.58■■□□□ 1.37
DDR1-272ENST00000513243 RC3H1Q5TC82 1133 aaKnown RBP23.58■■□□□ 1.37
DDR1-272ENST00000513243 NEFMP07197 916 aa23.57■■□□□ 1.36
DDR1-272ENST00000513243 ARXQ96QS3 562 aa23.57■■□□□ 1.36
DDR1-272ENST00000513243 CNTNAP4Q9C0A0 1308 aa23.57■■□□□ 1.36
DDR1-272ENST00000513243 MCM10Q7L590 875 aa23.56■■□□□ 1.36
DDR1-272ENST00000513243 RTF1Q92541 710 aaKnown RBP23.56■■□□□ 1.36
DDR1-272ENST00000513243 PNNQ9H307 717 aaKnown RBP23.56■■□□□ 1.36
DDR1-272ENST00000513243 COL5A3P25940 1745 aaPredicted RBP23.56■■□□□ 1.36
DDR1-272ENST00000513243 KCPQ6ZWJ8 1503 aa23.55■■□□□ 1.36
DDR1-272ENST00000513243 HTATSF1O43719 755 aaKnown RBP23.55■■□□□ 1.36
DDR1-272ENST00000513243 POLD1P28340 1107 aa23.55■■□□□ 1.36
DDR1-272ENST00000513243 DCTN1Q14203 1278 aa23.55■■□□□ 1.36
DDR1-272ENST00000513243 MSL1Q68DK7 614 aa23.55■■□□□ 1.36
DDR1-272ENST00000513243 DNAJC10Q8IXB1 793 aa23.55■■□□□ 1.36
DDR1-272ENST00000513243 COL24A1Q17RW2 1714 aa23.55■■□□□ 1.36
DDR1-272ENST00000513243 RTCBQ9Y3I0 505 aaKnown RBP23.54■■□□□ 1.36
DDR1-272ENST00000513243 TJP1Q07157 1748 aa23.53■■□□□ 1.36
DDR1-272ENST00000513243 SIPA1L3O60292 1781 aaPredicted RBP23.53■■□□□ 1.36
DDR1-272ENST00000513243 RPS6KA4O75676 772 aa23.53■■□□□ 1.36
DDR1-272ENST00000513243 CRKLP46109 303 aaKnown RBP23.53■■□□□ 1.36
DDR1-272ENST00000513243 ZNF790Q6PG37 636 aa23.53■■□□□ 1.36
DDR1-272ENST00000513243 TTC5Q8N0Z6 440 aa23.53■■□□□ 1.36
DDR1-272ENST00000513243 FHDC1Q9C0D6 1143 aaPredicted RBP23.53■■□□□ 1.36
DDR1-272ENST00000513243 CICQ96RK0 1608 aaPredicted RBP23.52■■□□□ 1.36
DDR1-272ENST00000513243 NFE2L2Q16236 605 aa23.52■■□□□ 1.36
DDR1-272ENST00000513243 TRAPPC3LQ5T215 181 aa23.52■■□□□ 1.36
DDR1-272ENST00000513243 MAPK8IP3Q9UPT6 1336 aa23.52■■□□□ 1.36
DDR1-272ENST00000513243 MYH14Q7Z406 1995 aaKnown RBP23.51■■□□□ 1.35
DDR1-272ENST00000513243 INTS5Q6P9B9 1019 aaKnown RBP23.51■■□□□ 1.35
DDR1-272ENST00000513243 VSIG10Q8N0Z9 540 aa23.51■■□□□ 1.35
DDR1-272ENST00000513243 ZNF496Q96IT1 587 aaPredicted RBP23.51■■□□□ 1.35
DDR1-272ENST00000513243 UBR2Q8IWV8 1755 aa23.5■■□□□ 1.35
DDR1-272ENST00000513243 BTBD11A6QL63 1104 aa23.5■■□□□ 1.35
DDR1-272ENST00000513243 KCNQ3O43525 872 aa23.5■■□□□ 1.35
DDR1-272ENST00000513243 CYP19A1P11511 503 aaPredicted RBP23.5■■□□□ 1.35
DDR1-272ENST00000513243 ARHGEF1Q92888 912 aaKnown RBP23.5■■□□□ 1.35
DDR1-272ENST00000513243 SYT17Q9BSW7 474 aa23.5■■□□□ 1.35
DDR1-272ENST00000513243 ADRA2BP18089 450 aa23.49■■□□□ 1.35
DDR1-272ENST00000513243 WDR43Q15061 677 aaKnown RBP eCLIP23.48■■□□□ 1.35
DDR1-272ENST00000513243 CCDC87Q9NVE4 849 aa23.47■■□□□ 1.35
DDR1-272ENST00000513243 ADAMTS8Q9UP79 889 aa23.47■■□□□ 1.35
DDR1-272ENST00000513243 HEG1Q9ULI3 1381 aa23.47■■□□□ 1.35
DDR1-272ENST00000513243 CCDC146Q8IYE0 955 aa23.46■■□□□ 1.35
DDR1-272ENST00000513243 DLG5Q8TDM6 1919 aa23.46■■□□□ 1.35
DDR1-272ENST00000513243 FMNL2Q96PY5 1086 aa23.46■■□□□ 1.35
DDR1-272ENST00000513243 RFC4P35249 363 aa23.45■■□□□ 1.34
DDR1-272ENST00000513243 TAF7Q15545 349 aaPredicted RBP23.45■■□□□ 1.34
DDR1-272ENST00000513243 THUMPD2Q9BTF0 503 aaKnown RBP23.45■■□□□ 1.34
DDR1-272ENST00000513243 KLHL34Q8N239 644 aa23.44■■□□□ 1.34
DDR1-272ENST00000513243 STARD3NLO95772 234 aa23.43■■□□□ 1.34
DDR1-272ENST00000513243 RIPK4P57078 832 aa23.43■■□□□ 1.34
DDR1-272ENST00000513243 ZBTB1Q9Y2K1 713 aa23.43■■□□□ 1.34
DDR1-272ENST00000513243 SOS1Q07889 1333 aaPredicted RBP23.42■■□□□ 1.34
DDR1-272ENST00000513243 TMPOP42166 694 aaKnown RBP23.42■■□□□ 1.34
DDR1-272ENST00000513243 TEX13AQ9BXU3 409 aaPredicted RBP23.42■■□□□ 1.34
DDR1-272ENST00000513243 MIS18AQ9NYP9 233 aa23.42■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms