RNA–Protein interactions for RNA: ENST00000513135.5

TNFRSF25-219, Transcript of TNF receptor superfamily member 25, humanhuman

TSL 5

Gene TNFRSF25, Length 3,483 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF25-219ENST00000513135 USP31Q70CQ4 1352 aa16.34■□□□□ 0.21
TNFRSF25-219ENST00000513135 MAP3K5Q99683 1374 aa16.34■□□□□ 0.21
TNFRSF25-219ENST00000513135 CDK12Q9NYV4 1490 aaPredicted RBP16.34■□□□□ 0.21
TNFRSF25-219ENST00000513135 A0A0U1RQG5 324 aaPredicted RBP16.33■□□□□ 0.21
TNFRSF25-219ENST00000513135 CHD2O14647 1828 aaKnown RBP16.33■□□□□ 0.21
TNFRSF25-219ENST00000513135 CCDC27Q2M243 656 aa16.33■□□□□ 0.2
TNFRSF25-219ENST00000513135 AKAP4Q5JQC9 854 aa16.33■□□□□ 0.2
TNFRSF25-219ENST00000513135 RNF123Q5XPI4 1314 aa16.33■□□□□ 0.2
TNFRSF25-219ENST00000513135 TNS3Q68CZ2 1445 aa16.33■□□□□ 0.2
TNFRSF25-219ENST00000513135 PROSER3Q2NL68 480 aa16.33■□□□□ 0.2
TNFRSF25-219ENST00000513135 ZNF496Q96IT1 587 aaPredicted RBP16.33■□□□□ 0.2
TNFRSF25-219ENST00000513135 AMOTQ4VCS5 1084 aa16.32■□□□□ 0.2
TNFRSF25-219ENST00000513135 ANKRD45Q5TZF3 282 aa16.32■□□□□ 0.2
TNFRSF25-219ENST00000513135 ZBTB3Q9H5J0 574 aa16.32■□□□□ 0.2
TNFRSF25-219ENST00000513135 ARHGEF10O15013 1369 aa16.32■□□□□ 0.2
TNFRSF25-219ENST00000513135 RIC3Q7Z5B4 369 aa16.32■□□□□ 0.2
TNFRSF25-219ENST00000513135 OS9Q13438 667 aaPredicted RBP16.32■□□□□ 0.2
TNFRSF25-219ENST00000513135 USP16Q9Y5T5 823 aa16.32■□□□□ 0.2
TNFRSF25-219ENST00000513135 SSH2Q76I76 1423 aa16.32■□□□□ 0.2
TNFRSF25-219ENST00000513135 PI4KAP2A4QPH2 592 aa16.31■□□□□ 0.2
TNFRSF25-219ENST00000513135 CHL1O00533 1208 aa16.31■□□□□ 0.2
TNFRSF25-219ENST00000513135 PRIM1P49642 420 aaKnown RBP16.31■□□□□ 0.2
TNFRSF25-219ENST00000513135 PI4KAP1Q8N8J0 262 aa16.31■□□□□ 0.2
TNFRSF25-219ENST00000513135 TMOD3Q9NYL9 352 aa16.31■□□□□ 0.2
TNFRSF25-219ENST00000513135 MVPQ14764 893 aaKnown RBP16.31■□□□□ 0.2
TNFRSF25-219ENST00000513135 CCDC30Q5VVM6 783 aa16.31■□□□□ 0.2
TNFRSF25-219ENST00000513135 DDB1Q16531 1140 aa16.31■□□□□ 0.2
TNFRSF25-219ENST00000513135 KIF16BQ96L93 1317 aa16.3■□□□□ 0.2
TNFRSF25-219ENST00000513135 MEIS3Q99687 375 aa16.3■□□□□ 0.2
TNFRSF25-219ENST00000513135 XRN1Q8IZH2 1706 aaKnown RBP16.3■□□□□ 0.2
TNFRSF25-219ENST00000513135 NPHP1O15259 732 aa16.3■□□□□ 0.2
TNFRSF25-219ENST00000513135 FLIIQ13045 1269 aa16.3■□□□□ 0.2
TNFRSF25-219ENST00000513135 ASAP1Q9ULH1 1129 aa16.3■□□□□ 0.2
TNFRSF25-219ENST00000513135 SOS2Q07890 1332 aaPredicted RBP16.3■□□□□ 0.2
TNFRSF25-219ENST00000513135 A1BGP04217 495 aa16.29■□□□□ 0.2
TNFRSF25-219ENST00000513135 PHKG2P15735 406 aa16.29■□□□□ 0.2
TNFRSF25-219ENST00000513135 C9orf78Q9NZ63 289 aaPredicted RBP16.29■□□□□ 0.2
TNFRSF25-219ENST00000513135 CWF19L2Q2TBE0 894 aaKnown RBP16.29■□□□□ 0.2
TNFRSF25-219ENST00000513135 TRMT2AQ8IZ69 625 aaKnown RBP16.29■□□□□ 0.2
TNFRSF25-219ENST00000513135 MRPL50Q8N5N7 158 aaKnown RBP16.29■□□□□ 0.2
TNFRSF25-219ENST00000513135 CERKQ8TCT0 537 aa16.29■□□□□ 0.2
TNFRSF25-219ENST00000513135 FAM43AQ8N2R8 423 aa16.28■□□□□ 0.2
TNFRSF25-219ENST00000513135 USP21Q9UK80 565 aa16.28■□□□□ 0.2
TNFRSF25-219ENST00000513135 COL3A1P02461 1466 aaPredicted RBP16.28■□□□□ 0.2
TNFRSF25-219ENST00000513135 SMARCA5O60264 1052 aaPredicted RBP16.28■□□□□ 0.2
TNFRSF25-219ENST00000513135 BICDL1Q6ZP65 573 aa16.28■□□□□ 0.2
TNFRSF25-219ENST00000513135 KIF20BQ96Q89 1820 aa16.27■□□□□ 0.2
TNFRSF25-219ENST00000513135 WDR17Q8IZU2 1322 aa16.27■□□□□ 0.2
TNFRSF25-219ENST00000513135 SIL1Q9H173 461 aa16.27■□□□□ 0.2
TNFRSF25-219ENST00000513135 DDX19BQ9UMR2 479 aa16.27■□□□□ 0.2
TNFRSF25-219ENST00000513135 GPTP24298 496 aa16.27■□□□□ 0.19
TNFRSF25-219ENST00000513135 TSHZ3Q63HK5 1081 aa16.27■□□□□ 0.19
TNFRSF25-219ENST00000513135 ZNF790Q6PG37 636 aa16.27■□□□□ 0.19
TNFRSF25-219ENST00000513135 KCNQ2O43526 872 aa16.27■□□□□ 0.19
TNFRSF25-219ENST00000513135 EXOC6BQ9Y2D4 811 aa16.27■□□□□ 0.19
TNFRSF25-219ENST00000513135 USP19O94966 1318 aa16.25■□□□□ 0.19
TNFRSF25-219ENST00000513135 PIK3C2AO00443 1686 aa16.25■□□□□ 0.19
TNFRSF25-219ENST00000513135 COPS6Q7L5N1 327 aa16.25■□□□□ 0.19
TNFRSF25-219ENST00000513135 PIAS4Q8N2W9 510 aaPredicted RBP16.25■□□□□ 0.19
TNFRSF25-219ENST00000513135 API5Q9BZZ5 524 aaKnown RBP16.25■□□□□ 0.19
TNFRSF25-219ENST00000513135 STRCP1A6NGW2 1772 aa16.25■□□□□ 0.19
TNFRSF25-219ENST00000513135 RWDD1Q9H446 243 aaPredicted RBP16.24■□□□□ 0.19
TNFRSF25-219ENST00000513135 PDE3AQ14432 1141 aa16.24■□□□□ 0.19
TNFRSF25-219ENST00000513135 MAP3K2Q9Y2U5 619 aa16.24■□□□□ 0.19
TNFRSF25-219ENST00000513135 EIF4A1P60842 406 aaKnown RBP16.24■□□□□ 0.19
TNFRSF25-219ENST00000513135 CCDC24Q8N4L8 307 aa16.24■□□□□ 0.19
TNFRSF25-219ENST00000513135 TRIM44Q96DX7 344 aaPredicted RBP16.24■□□□□ 0.19
TNFRSF25-219ENST00000513135 TBC1D2BQ9UPU7 963 aa16.24■□□□□ 0.19
TNFRSF25-219ENST00000513135 XAGE3Q8WTP9 111 aa16.23■□□□□ 0.19
TNFRSF25-219ENST00000513135 SLC52A2Q9HAB3 445 aa16.23■□□□□ 0.19
TNFRSF25-219ENST00000513135 IL1RAPL2Q9NP60 686 aa16.23■□□□□ 0.19
TNFRSF25-219ENST00000513135 ZNF142P52746 1687 aaPredicted RBP16.23■□□□□ 0.19
TNFRSF25-219ENST00000513135 MYD88Q99836 296 aa16.23■□□□□ 0.19
TNFRSF25-219ENST00000513135 PDZRN3Q9UPQ7 1066 aa16.22■□□□□ 0.19
TNFRSF25-219ENST00000513135 KNDC1Q76NI1 1749 aa16.22■□□□□ 0.19
TNFRSF25-219ENST00000513135 FMN2Q9NZ56 1722 aa16.22■□□□□ 0.19
TNFRSF25-219ENST00000513135 PHF14O94880 888 aa16.22■□□□□ 0.19
TNFRSF25-219ENST00000513135 MS4A1P11836 297 aa16.22■□□□□ 0.19
TNFRSF25-219ENST00000513135 RRAGDQ9NQL2 400 aaPredicted RBP16.22■□□□□ 0.19
TNFRSF25-219ENST00000513135 PTF1AQ7RTS3 328 aa16.21■□□□□ 0.19
TNFRSF25-219ENST00000513135 DNAJC10Q8IXB1 793 aa16.21■□□□□ 0.19
TNFRSF25-219ENST00000513135 DCAF5Q96JK2 942 aa16.21■□□□□ 0.19
TNFRSF25-219ENST00000513135 WWC3Q9ULE0 1092 aa16.21■□□□□ 0.19
TNFRSF25-219ENST00000513135 PXDNQ92626 1479 aa16.21■□□□□ 0.19
TNFRSF25-219ENST00000513135 ZNF853P0CG23 659 aa16.21■□□□□ 0.19
TNFRSF25-219ENST00000513135 IL16Q14005 1332 aa16.21■□□□□ 0.19
TNFRSF25-219ENST00000513135 LRRFIP2Q9Y608 721 aaKnown RBP16.21■□□□□ 0.18
TNFRSF25-219ENST00000513135 STRCQ7RTU9 1775 aa16.21■□□□□ 0.18
TNFRSF25-219ENST00000513135 SHPRHQ149N8 1683 aa16.2■□□□□ 0.18
TNFRSF25-219ENST00000513135 PEAK1Q9H792 1746 aa16.2■□□□□ 0.18
TNFRSF25-219ENST00000513135 UBTFL1P0CB47 393 aaPredicted RBP16.2■□□□□ 0.18
TNFRSF25-219ENST00000513135 MAP4K4O95819 1239 aaPredicted RBP16.2■□□□□ 0.18
TNFRSF25-219ENST00000513135 BECN1Q14457 450 aa16.2■□□□□ 0.18
TNFRSF25-219ENST00000513135 KLHDC4Q8TBB5 520 aa16.2■□□□□ 0.18
TNFRSF25-219ENST00000513135 FMNL2Q96PY5 1086 aa16.2■□□□□ 0.18
TNFRSF25-219ENST00000513135 L1TD1Q5T7N2 865 aaKnown RBP16.19■□□□□ 0.18
TNFRSF25-219ENST00000513135 C16orf71Q8IYS4 520 aaPredicted RBP16.19■□□□□ 0.18
TNFRSF25-219ENST00000513135 MEGF6O75095 1541 aa16.19■□□□□ 0.18
TNFRSF25-219ENST00000513135 GIGYF1O75420 1035 aaPredicted RBP16.18■□□□□ 0.18
TNFRSF25-219ENST00000513135 CARD10Q9BWT7 1032 aa16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms