RNA–Protein interactions for RNA: ENST00000513043.5

DDR1-270, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 604 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-270ENST00000513043 RREB1Q92766 1687 aa23■■□□□ 1.27
DDR1-270ENST00000513043 VIRMAQ69YN4 1812 aaKnown RBP22.99■■□□□ 1.27
DDR1-270ENST00000513043 NEUROD2Q15784 382 aa22.99■■□□□ 1.27
DDR1-270ENST00000513043 SMARCC1Q92922 1105 aaPredicted RBP22.99■■□□□ 1.27
DDR1-270ENST00000513043 ADAMTS7Q9UKP4 1686 aa22.99■■□□□ 1.27
DDR1-270ENST00000513043 TMPOP42166 694 aaKnown RBP22.98■■□□□ 1.27
DDR1-270ENST00000513043 RIPK4P57078 832 aa22.98■■□□□ 1.27
DDR1-270ENST00000513043 TEFQ10587 303 aa22.98■■□□□ 1.27
DDR1-270ENST00000513043 LRRC4BQ9NT99 713 aa22.98■■□□□ 1.27
DDR1-270ENST00000513043 NUP188Q5SRE5 1749 aa22.98■■□□□ 1.27
DDR1-270ENST00000513043 MRC1P22897 1456 aa22.98■■□□□ 1.27
DDR1-270ENST00000513043 SENP3-EIF4A1A0A087X0R7 540 aa22.97■■□□□ 1.27
DDR1-270ENST00000513043 FAM9BQ8IZU0 186 aa22.97■■□□□ 1.27
DDR1-270ENST00000513043 CCNL1Q9UK58 526 aaPredicted RBP22.97■■□□□ 1.27
DDR1-270ENST00000513043 DLG5Q8TDM6 1919 aa22.96■■□□□ 1.27
DDR1-270ENST00000513043 THUMPD2Q9BTF0 503 aaKnown RBP22.96■■□□□ 1.27
DDR1-270ENST00000513043 CEMIPQ8WUJ3 1361 aa22.96■■□□□ 1.27
DDR1-270ENST00000513043 HTATSF1O43719 755 aaKnown RBP22.95■■□□□ 1.26
DDR1-270ENST00000513043 SLC39A6Q13433 755 aa22.95■■□□□ 1.26
DDR1-270ENST00000513043 MIER1Q8N108 512 aa22.95■■□□□ 1.26
DDR1-270ENST00000513043 RBM42Q9BTD8 480 aaKnown RBP22.95■■□□□ 1.26
DDR1-270ENST00000513043 LY75O60449 1722 aa22.94■■□□□ 1.26
DDR1-270ENST00000513043 APAF1O14727 1248 aa22.94■■□□□ 1.26
DDR1-270ENST00000513043 SLC27A3Q5K4L6 730 aa22.94■■□□□ 1.26
DDR1-270ENST00000513043 PTCD1O75127 700 aaKnown RBP22.93■■□□□ 1.26
DDR1-270ENST00000513043 ANO8Q9HCE9 1232 aaPredicted RBP22.93■■□□□ 1.26
DDR1-270ENST00000513043 LOC102724428A0A0B4J2F2 783 aa22.92■■□□□ 1.26
DDR1-270ENST00000513043 PSDA5PKW4 1024 aaPredicted RBP22.92■■□□□ 1.26
DDR1-270ENST00000513043 SIK1P57059 783 aa22.92■■□□□ 1.26
DDR1-270ENST00000513043 NBPF14Q5TI25 921 aa22.92■■□□□ 1.26
DDR1-270ENST00000513043 R3HDM1Q15032 1099 aaKnown RBP22.91■■□□□ 1.26
DDR1-270ENST00000513043 CCER2I3L3R5 266 aa22.9■■□□□ 1.26
DDR1-270ENST00000513043 BTBD11A6QL63 1104 aa22.89■■□□□ 1.25
DDR1-270ENST00000513043 ATP6V1AP38606 617 aa22.89■■□□□ 1.25
DDR1-270ENST00000513043 LMOD3Q0VAK6 560 aa22.89■■□□□ 1.25
DDR1-270ENST00000513043 SLC4A9Q96Q91 983 aa22.89■■□□□ 1.25
DDR1-270ENST00000513043 SIPA1L3O60292 1781 aaPredicted RBP22.89■■□□□ 1.25
DDR1-270ENST00000513043 TTC5Q8N0Z6 440 aa22.88■■□□□ 1.25
DDR1-270ENST00000513043 STK32BQ9NY57 414 aa22.88■■□□□ 1.25
DDR1-270ENST00000513043 MIS18AQ9NYP9 233 aa22.88■■□□□ 1.25
DDR1-270ENST00000513043 TRIM35Q9UPQ4 493 aa22.88■■□□□ 1.25
DDR1-270ENST00000513043 PAPPAQ13219 1627 aa22.87■■□□□ 1.25
DDR1-270ENST00000513043 KCNQ3O43525 872 aa22.87■■□□□ 1.25
DDR1-270ENST00000513043 ITPK1Q13572 414 aa22.87■■□□□ 1.25
DDR1-270ENST00000513043 ZNF827Q17R98 1081 aa22.87■■□□□ 1.25
DDR1-270ENST00000513043 TAF7Q15545 349 aaPredicted RBP22.86■■□□□ 1.25
DDR1-270ENST00000513043 ZNF790Q6PG37 636 aa22.86■■□□□ 1.25
DDR1-270ENST00000513043 SLC15A2Q16348 729 aa22.85■■□□□ 1.25
DDR1-270ENST00000513043 LINC00116Q8NCU8 138 aa22.85■■□□□ 1.25
DDR1-270ENST00000513043 C5P01031 1676 aa22.84■■□□□ 1.25
DDR1-270ENST00000513043 KCPQ6ZWJ8 1503 aa22.84■■□□□ 1.25
DDR1-270ENST00000513043 AKT1S1Q96B36 256 aa22.83■■□□□ 1.25
DDR1-270ENST00000513043 ZNF496Q96IT1 587 aaPredicted RBP22.83■■□□□ 1.25
DDR1-270ENST00000513043 SALL2Q9Y467 1007 aaPredicted RBP22.83■■□□□ 1.25
DDR1-270ENST00000513043 TAF1LQ8IZX4 1826 aa22.82■■□□□ 1.24
DDR1-270ENST00000513043 DNAJC10Q8IXB1 793 aa22.81■■□□□ 1.24
DDR1-270ENST00000513043 TFCP2L1Q9NZI6 479 aa22.81■■□□□ 1.24
DDR1-270ENST00000513043 LAS1LQ9Y4W2 734 aaKnown RBP22.81■■□□□ 1.24
DDR1-270ENST00000513043 AK7Q96M32 723 aa22.8■■□□□ 1.24
DDR1-270ENST00000513043 C4BP0C0L5 1744 aa22.79■■□□□ 1.24
DDR1-270ENST00000513043 UBR2Q8IWV8 1755 aa22.79■■□□□ 1.24
DDR1-270ENST00000513043 FMNL2Q96PY5 1086 aa22.79■■□□□ 1.24
DDR1-270ENST00000513043 PDGFDQ9GZP0 370 aaPredicted RBP22.79■■□□□ 1.24
DDR1-270ENST00000513043 TSPYL4Q9UJ04 414 aa22.79■■□□□ 1.24
DDR1-270ENST00000513043 TJP1Q07157 1748 aa22.78■■□□□ 1.24
DDR1-270ENST00000513043 SMIM5Q71RC9 77 aa22.78■■□□□ 1.24
DDR1-270ENST00000513043 LRP5O75197 1615 aa22.78■■□□□ 1.24
DDR1-270ENST00000513043 HEG1Q9ULI3 1381 aa22.77■■□□□ 1.24
DDR1-270ENST00000513043 GNPATO15228 680 aa22.76■■□□□ 1.23
DDR1-270ENST00000513043 ZNF831Q5JPB2 1677 aa22.76■■□□□ 1.23
DDR1-270ENST00000513043 PHF14O94880 888 aa22.75■■□□□ 1.23
DDR1-270ENST00000513043 HMGB2P26583 209 aaKnown RBP22.75■■□□□ 1.23
DDR1-270ENST00000513043 AMIGO3Q86WK7 504 aa22.75■■□□□ 1.23
DDR1-270ENST00000513043 VSIG10Q8N0Z9 540 aa22.75■■□□□ 1.23
DDR1-270ENST00000513043 PNPLA7Q6ZV29 1317 aa22.75■■□□□ 1.23
DDR1-270ENST00000513043 COL5A3P25940 1745 aaPredicted RBP22.74■■□□□ 1.23
DDR1-270ENST00000513043 KDM3BQ7LBC6 1761 aa22.74■■□□□ 1.23
DDR1-270ENST00000513043 TUBGCP6Q96RT7 1819 aa22.74■■□□□ 1.23
DDR1-270ENST00000513043 PRAMEF22A3QJZ6 481 aa22.74■■□□□ 1.23
DDR1-270ENST00000513043 CRKLP46109 303 aaKnown RBP22.74■■□□□ 1.23
DDR1-270ENST00000513043 WWC1Q8IX03 1113 aa22.74■■□□□ 1.23
DDR1-270ENST00000513043 MSH5O43196 834 aa22.73■■□□□ 1.23
DDR1-270ENST00000513043 CYP19A1P11511 503 aaPredicted RBP22.73■■□□□ 1.23
DDR1-270ENST00000513043 EIF4A1P60842 406 aaKnown RBP22.73■■□□□ 1.23
DDR1-270ENST00000513043 CNTNAP4Q9C0A0 1308 aa22.73■■□□□ 1.23
DDR1-270ENST00000513043 CHL1O00533 1208 aa22.72■■□□□ 1.23
DDR1-270ENST00000513043 CCDC27Q2M243 656 aa22.72■■□□□ 1.23
DDR1-270ENST00000513043 CICQ96RK0 1608 aaPredicted RBP22.71■■□□□ 1.23
DDR1-270ENST00000513043 SNRPA1P09661 255 aaKnown RBP22.71■■□□□ 1.23
DDR1-270ENST00000513043 CALD1Q05682 793 aaKnown RBP22.71■■□□□ 1.23
DDR1-270ENST00000513043 RC3H1Q5TC82 1133 aaKnown RBP22.71■■□□□ 1.23
DDR1-270ENST00000513043 CCDC87Q9NVE4 849 aa22.71■■□□□ 1.23
DDR1-270ENST00000513043 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP22.7■■□□□ 1.22
DDR1-270ENST00000513043 ZBTB7AO95365 584 aa22.7■■□□□ 1.22
DDR1-270ENST00000513043 STARD3NLO95772 234 aa22.7■■□□□ 1.22
DDR1-270ENST00000513043 INTS5Q6P9B9 1019 aaKnown RBP22.7■■□□□ 1.22
DDR1-270ENST00000513043 COL23A1Q86Y22 540 aaPredicted RBP22.7■■□□□ 1.22
DDR1-270ENST00000513043 CFAP44Q96MT7 982 aa22.7■■□□□ 1.22
DDR1-270ENST00000513043 BABAM1Q9NWV8 329 aa22.7■■□□□ 1.22
DDR1-270ENST00000513043 RTCBQ9Y3I0 505 aaKnown RBP22.7■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms