RNA–Protein interactions for RNA: ENST00000512901.6

LINC01550-203, Transcript of long intergenic non-protein coding RNA 1550, humanhuman

TSL 1 (best)

Gene LINC01550, Length 2,192 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01550-203ENST00000512901 SIPA1L3O60292 1781 aaPredicted RBP13.53□□□□□ -0.24
LINC01550-203ENST00000512901 ERVV-2B6SEH9 535 aa13.52□□□□□ -0.24
LINC01550-203ENST00000512901 NFATC2IPQ8NCF5 419 aa13.52□□□□□ -0.24
LINC01550-203ENST00000512901 MRC1P22897 1456 aa13.52□□□□□ -0.25
LINC01550-203ENST00000512901 MARCH10Q8NA82 808 aaPredicted RBP13.51□□□□□ -0.25
LINC01550-203ENST00000512901 KDM3BQ7LBC6 1761 aa13.51□□□□□ -0.25
LINC01550-203ENST00000512901 ELL2O00472 640 aaPredicted RBP13.51□□□□□ -0.25
LINC01550-203ENST00000512901 CT47B1P0C2W7 299 aaPredicted RBP13.51□□□□□ -0.25
LINC01550-203ENST00000512901 RBM6P78332 1123 aaKnown RBP13.51□□□□□ -0.25
LINC01550-203ENST00000512901 SEPT12Q8IYM1 358 aa13.51□□□□□ -0.25
LINC01550-203ENST00000512901 SUPT16HQ9Y5B9 1047 aaKnown RBP13.51□□□□□ -0.25
LINC01550-203ENST00000512901 TOGARAM1Q9Y4F4 1720 aa13.51□□□□□ -0.25
LINC01550-203ENST00000512901 ONECUT3O60422 494 aaPredicted RBP13.5□□□□□ -0.25
LINC01550-203ENST00000512901 TMOD3Q9NYL9 352 aa13.5□□□□□ -0.25
LINC01550-203ENST00000512901 TWISTNBQ3B726 338 aaPredicted RBP13.49□□□□□ -0.25
LINC01550-203ENST00000512901 DOT1LQ8TEK3 1739 aa13.49□□□□□ -0.25
LINC01550-203ENST00000512901 TTC5Q8N0Z6 440 aa13.49□□□□□ -0.25
LINC01550-203ENST00000512901 C8orf58Q8NAV2 365 aa13.49□□□□□ -0.25
LINC01550-203ENST00000512901 SYTL4Q96C24 671 aaPredicted RBP13.49□□□□□ -0.25
LINC01550-203ENST00000512901 ITGB4P16144 1822 aa13.49□□□□□ -0.25
LINC01550-203ENST00000512901 SLC39A6Q13433 755 aa13.48□□□□□ -0.25
LINC01550-203ENST00000512901 KRT24Q2M2I5 525 aa13.48□□□□□ -0.25
LINC01550-203ENST00000512901 TSPYL6Q8N831 410 aa13.48□□□□□ -0.25
LINC01550-203ENST00000512901 KCNQ3O43525 872 aa13.48□□□□□ -0.25
LINC01550-203ENST00000512901 ZNF790Q6PG37 636 aa13.48□□□□□ -0.25
LINC01550-203ENST00000512901 ILDR1Q86SU0 546 aaPredicted RBP13.48□□□□□ -0.25
LINC01550-203ENST00000512901 RXRBP28702 533 aa13.47□□□□□ -0.25
LINC01550-203ENST00000512901 ACSBG1Q96GR2 724 aa13.47□□□□□ -0.25
LINC01550-203ENST00000512901 VAMP4O75379 141 aa13.47□□□□□ -0.25
LINC01550-203ENST00000512901 EIF4A1P60842 406 aaKnown RBP13.47□□□□□ -0.25
LINC01550-203ENST00000512901 PRIM1P49642 420 aaKnown RBP13.46□□□□□ -0.25
LINC01550-203ENST00000512901 RARSP54136 660 aaKnown RBP13.46□□□□□ -0.25
LINC01550-203ENST00000512901 ZNF428Q96B54 188 aa13.46□□□□□ -0.25
LINC01550-203ENST00000512901 PIGBQ92521 554 aa13.45□□□□□ -0.26
LINC01550-203ENST00000512901 BCL2L13Q9BXK5 485 aa13.45□□□□□ -0.26
LINC01550-203ENST00000512901 SMC4Q9NTJ3 1288 aa13.45□□□□□ -0.26
LINC01550-203ENST00000512901 RGS17Q9UGC6 210 aaPredicted RBP13.45□□□□□ -0.26
LINC01550-203ENST00000512901 BCAR3O75815 825 aa13.45□□□□□ -0.26
LINC01550-203ENST00000512901 BRWD3Q6RI45 1802 aa13.45□□□□□ -0.26
LINC01550-203ENST00000512901 BCL9O00512 1426 aa13.44□□□□□ -0.26
LINC01550-203ENST00000512901 SOS1Q07889 1333 aaPredicted RBP13.44□□□□□ -0.26
LINC01550-203ENST00000512901 NEFLP07196 543 aa13.44□□□□□ -0.26
LINC01550-203ENST00000512901 FAM182BQ5T319 152 aa13.44□□□□□ -0.26
LINC01550-203ENST00000512901 KRT27Q7Z3Y8 459 aa13.44□□□□□ -0.26
LINC01550-203ENST00000512901 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.44□□□□□ -0.26
LINC01550-203ENST00000512901 FMNL2Q96PY5 1086 aa13.44□□□□□ -0.26
LINC01550-203ENST00000512901 CANXP27824 592 aaKnown RBP13.44□□□□□ -0.26
LINC01550-203ENST00000512901 ALDH1L2Q3SY69 923 aa13.44□□□□□ -0.26
LINC01550-203ENST00000512901 POTEAQ6S8J7 498 aa13.44□□□□□ -0.26
LINC01550-203ENST00000512901 PAPPAQ13219 1627 aa13.44□□□□□ -0.26
LINC01550-203ENST00000512901 RRP1P56182 461 aaKnown RBP13.43□□□□□ -0.26
LINC01550-203ENST00000512901 SSH1Q8WYL5 1049 aa13.43□□□□□ -0.26
LINC01550-203ENST00000512901 GTF3C3Q9Y5Q9 886 aa13.43□□□□□ -0.26
LINC01550-203ENST00000512901 TCERG1O14776 1098 aaKnown RBP13.42□□□□□ -0.26
LINC01550-203ENST00000512901 HOXB7P09629 217 aa13.42□□□□□ -0.26
LINC01550-203ENST00000512901 ZNF496Q96IT1 587 aaPredicted RBP13.42□□□□□ -0.26
LINC01550-203ENST00000512901 CHMP4AQ9BY43 222 aa13.42□□□□□ -0.26
LINC01550-203ENST00000512901 HDGFL1Q5TGJ6 251 aa13.42□□□□□ -0.26
LINC01550-203ENST00000512901 FRAT1Q92837 279 aaPredicted RBP13.42□□□□□ -0.26
LINC01550-203ENST00000512901 ASAP1Q9ULH1 1129 aa13.42□□□□□ -0.26
LINC01550-203ENST00000512901 UBR2Q8IWV8 1755 aa13.42□□□□□ -0.26
LINC01550-203ENST00000512901 PTCD1O75127 700 aaKnown RBP13.41□□□□□ -0.26
LINC01550-203ENST00000512901 GIGYF1O75420 1035 aaPredicted RBP13.41□□□□□ -0.26
LINC01550-203ENST00000512901 EIF2S2P20042 333 aaKnown RBP13.41□□□□□ -0.26
LINC01550-203ENST00000512901 CCDC30Q5VVM6 783 aa13.41□□□□□ -0.26
LINC01550-203ENST00000512901 NECTIN2Q92692 538 aa13.41□□□□□ -0.26
LINC01550-203ENST00000512901 STK31Q9BXU1 1019 aa13.41□□□□□ -0.26
LINC01550-203ENST00000512901 ATG3Q9NT62 314 aa13.41□□□□□ -0.26
LINC01550-203ENST00000512901 RNF123Q5XPI4 1314 aa13.41□□□□□ -0.26
LINC01550-203ENST00000512901 KCNQ2O43526 872 aa13.41□□□□□ -0.26
LINC01550-203ENST00000512901 SNRPA1P09661 255 aaKnown RBP13.41□□□□□ -0.26
LINC01550-203ENST00000512901 RBM42Q9BTD8 480 aaKnown RBP13.41□□□□□ -0.26
LINC01550-203ENST00000512901 HEG1Q9ULI3 1381 aa13.4□□□□□ -0.26
LINC01550-203ENST00000512901 RGS12O14924 1447 aa13.4□□□□□ -0.26
LINC01550-203ENST00000512901 PLIN1O60240 522 aa13.4□□□□□ -0.26
LINC01550-203ENST00000512901 KIF16BQ96L93 1317 aa13.4□□□□□ -0.26
LINC01550-203ENST00000512901 NHSQ6T4R5 1651 aa13.4□□□□□ -0.27
LINC01550-203ENST00000512901 FAM196AQ6ZSG2 479 aa13.39□□□□□ -0.27
LINC01550-203ENST00000512901 KCPQ6ZWJ8 1503 aa13.39□□□□□ -0.27
LINC01550-203ENST00000512901 C5P01031 1676 aa13.39□□□□□ -0.27
LINC01550-203ENST00000512901 PRAMEF22A3QJZ6 481 aa13.39□□□□□ -0.27
LINC01550-203ENST00000512901 IRX6P78412 446 aaPredicted RBP13.39□□□□□ -0.27
LINC01550-203ENST00000512901 MRPL50Q8N5N7 158 aaKnown RBP13.39□□□□□ -0.27
LINC01550-203ENST00000512901 SBF2Q86WG5 1849 aa13.39□□□□□ -0.27
LINC01550-203ENST00000512901 SLC4A2P04920 1241 aa13.38□□□□□ -0.27
LINC01550-203ENST00000512901 SMARCC1Q92922 1105 aaPredicted RBP13.38□□□□□ -0.27
LINC01550-203ENST00000512901 CACNA1FO60840 1977 aa13.38□□□□□ -0.27
LINC01550-203ENST00000512901 ZKSCAN2Q63HK3 967 aa13.38□□□□□ -0.27
LINC01550-203ENST00000512901 NOB1Q9ULX3 412 aaKnown RBP13.38□□□□□ -0.27
LINC01550-203ENST00000512901 LAMB4A4D0S4 1761 aa13.37□□□□□ -0.27
LINC01550-203ENST00000512901 IPO8O15397 1037 aaKnown RBP13.37□□□□□ -0.27
LINC01550-203ENST00000512901 BTAF1O14981 1849 aa13.37□□□□□ -0.27
LINC01550-203ENST00000512901 BRPF1P55201 1214 aaPredicted RBP13.37□□□□□ -0.27
LINC01550-203ENST00000512901 VSIG10Q8N0Z9 540 aa13.37□□□□□ -0.27
LINC01550-203ENST00000512901 USP16Q9Y5T5 823 aa13.37□□□□□ -0.27
LINC01550-203ENST00000512901 PALLDQ8WX93 1383 aa13.36□□□□□ -0.27
LINC01550-203ENST00000512901 FKBP8Q14318 412 aa13.36□□□□□ -0.27
LINC01550-203ENST00000512901 CHPF2Q9P2E5 772 aa13.36□□□□□ -0.27
LINC01550-203ENST00000512901 DBF4Q9UBU7 674 aaPredicted RBP13.36□□□□□ -0.27
LINC01550-203ENST00000512901 PTF1AQ7RTS3 328 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms