RNA–Protein interactions for RNA: ENST00000512681.5

SPOCK3-222, Transcript of SPARC (osteonectin), cwcv and kazal like domains proteoglycan 3, human

TSL 2 BASIC

Gene SPOCK3, Length 1,457 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SPOCK3-222	ENST00000512681	CEMIP	Q8WUJ3	1361 aa		28.79	■■■□□ 2.2
SPOCK3-222	ENST00000512681	FAM196A	Q6ZSG2	479 aa		28.78	■■■□□ 2.2
SPOCK3-222	ENST00000512681	TOGARAM1	Q9Y4F4	1720 aa		28.78	■■■□□ 2.2
SPOCK3-222	ENST00000512681	FANCI	Q9NVI1	1328 aa		28.77	■■■□□ 2.2
SPOCK3-222	ENST00000512681	MCM10	Q7L590	875 aa		28.77	■■■□□ 2.2
SPOCK3-222	ENST00000512681	VIRMA	Q69YN4	1812 aa	Known RBP	28.76	■■■□□ 2.2
SPOCK3-222	ENST00000512681	ERVV-2	B6SEH9	535 aa		28.76	■■■□□ 2.19
SPOCK3-222	ENST00000512681	DCTN1	Q14203	1278 aa		28.76	■■■□□ 2.19
SPOCK3-222	ENST00000512681	DOT1L	Q8TEK3	1739 aa		28.75	■■■□□ 2.19
SPOCK3-222	ENST00000512681	MRC1	P22897	1456 aa		28.74	■■■□□ 2.19
SPOCK3-222	ENST00000512681	PELP1	Q8IZL8	1130 aa	Known RBP	28.73	■■■□□ 2.19
SPOCK3-222	ENST00000512681	THUMPD2	Q9BTF0	503 aa	Known RBP	28.72	■■■□□ 2.19
SPOCK3-222	ENST00000512681	SBF2	Q86WG5	1849 aa		28.72	■■■□□ 2.19
SPOCK3-222	ENST00000512681	ACSBG1	Q96GR2	724 aa		28.72	■■■□□ 2.19
SPOCK3-222	ENST00000512681	PRIM1	P49642	420 aa	Known RBP	28.71	■■■□□ 2.19
SPOCK3-222	ENST00000512681	SLC52A2	Q9HAB3	445 aa		28.71	■■■□□ 2.19
SPOCK3-222	ENST00000512681	IFT57	Q9NWB7	429 aa		28.71	■■■□□ 2.19
SPOCK3-222	ENST00000512681	NHS	Q6T4R5	1651 aa		28.7	■■■□□ 2.19
SPOCK3-222	ENST00000512681	CABP4	P57796	275 aa		28.7	■■■□□ 2.18
SPOCK3-222	ENST00000512681	ITGB4	P16144	1822 aa		28.7	■■■□□ 2.18
SPOCK3-222	ENST00000512681	GNAI1	P63096	354 aa		28.69	■■■□□ 2.18
SPOCK3-222	ENST00000512681	KCNQ2	O43526	872 aa		28.68	■■■□□ 2.18
SPOCK3-222	ENST00000512681	TEF	Q10587	303 aa		28.68	■■■□□ 2.18
SPOCK3-222	ENST00000512681	SIPA1L3	O60292	1781 aa	Predicted RBP	28.68	■■■□□ 2.18
SPOCK3-222	ENST00000512681	ZNF853	P0CG23	659 aa		28.67	■■■□□ 2.18
SPOCK3-222	ENST00000512681	NFATC2IP	Q8NCF5	419 aa		28.67	■■■□□ 2.18
SPOCK3-222	ENST00000512681	TSR2	Q969E8	191 aa	Known RBP	28.67	■■■□□ 2.18
SPOCK3-222	ENST00000512681	RARS	P54136	660 aa	Known RBP	28.66	■■■□□ 2.18
SPOCK3-222	ENST00000512681	TMOD3	Q9NYL9	352 aa		28.66	■■■□□ 2.18
SPOCK3-222	ENST00000512681	PLIN1	O60240	522 aa		28.66	■■■□□ 2.18
SPOCK3-222	ENST00000512681	KAT6B	Q8WYB5	2073 aa		28.66	■■■□□ 2.18
SPOCK3-222	ENST00000512681	PIGB	Q92521	554 aa		28.66	■■■□□ 2.18
SPOCK3-222	ENST00000512681	SYTL4	Q96C24	671 aa	Predicted RBP	28.66	■■■□□ 2.18
SPOCK3-222	ENST00000512681	BCL11B	Q9C0K0	894 aa	Predicted RBP	28.65	■■■□□ 2.18
SPOCK3-222	ENST00000512681	EXOSC9	Q06265	439 aa	Known RBP	28.64	■■■□□ 2.17
SPOCK3-222	ENST00000512681	TAF7	Q15545	349 aa	Predicted RBP	28.64	■■■□□ 2.17
SPOCK3-222	ENST00000512681	PTF1A	Q7RTS3	328 aa		28.64	■■■□□ 2.17
SPOCK3-222	ENST00000512681	BCAR3	O75815	825 aa		28.63	■■■□□ 2.17
SPOCK3-222	ENST00000512681	ILDR2	Q71H61	639 aa		28.63	■■■□□ 2.17
SPOCK3-222	ENST00000512681	CFAP44	Q96MT7	982 aa		28.63	■■■□□ 2.17
SPOCK3-222	ENST00000512681	TRIM37	O94972	964 aa		28.62	■■■□□ 2.17
SPOCK3-222	ENST00000512681	EXOC6	Q8TAG9	804 aa		28.61	■■■□□ 2.17
SPOCK3-222	ENST00000512681	ZNF428	Q96B54	188 aa		28.61	■■■□□ 2.17
SPOCK3-222	ENST00000512681	BTAF1	O14981	1849 aa		28.59	■■■□□ 2.17
SPOCK3-222	ENST00000512681	BABAM1	Q9NWV8	329 aa		28.59	■■■□□ 2.17
SPOCK3-222	ENST00000512681	BTBD11	A6QL63	1104 aa		28.59	■■■□□ 2.17
SPOCK3-222	ENST00000512681	PDE3A	Q14432	1141 aa		28.59	■■■□□ 2.17
SPOCK3-222	ENST00000512681	CHL1	O00533	1208 aa		28.58	■■■□□ 2.17
SPOCK3-222	ENST00000512681	CRBN	Q96SW2	442 aa		28.58	■■■□□ 2.17
SPOCK3-222	ENST00000512681	PAPPA	Q13219	1627 aa		28.57	■■■□□ 2.16
SPOCK3-222	ENST00000512681	MBIP	Q9NS73	344 aa		28.56	■■■□□ 2.16
SPOCK3-222	ENST00000512681	ATG3	Q9NT62	314 aa		28.56	■■■□□ 2.16
SPOCK3-222	ENST00000512681	MIS18A	Q9NYP9	233 aa		28.56	■■■□□ 2.16
SPOCK3-222	ENST00000512681	ASAP1	Q9ULH1	1129 aa		28.56	■■■□□ 2.16
SPOCK3-222	ENST00000512681	TNS1	Q9HBL0	1735 aa	Known RBP	28.56	■■■□□ 2.16
SPOCK3-222	ENST00000512681	C20orf194	Q5TEA3	1177 aa		28.55	■■■□□ 2.16
SPOCK3-222	ENST00000512681	B4GALNT3	Q6L9W6	998 aa		28.55	■■■□□ 2.16
SPOCK3-222	ENST00000512681	LAS1L	Q9Y4W2	734 aa	Known RBP	28.55	■■■□□ 2.16
SPOCK3-222	ENST00000512681	KDM3B	Q7LBC6	1761 aa		28.54	■■■□□ 2.16
SPOCK3-222	ENST00000512681	SLC39A6	Q13433	755 aa		28.54	■■■□□ 2.16
SPOCK3-222	ENST00000512681	ALDH1L2	Q3SY69	923 aa		28.54	■■■□□ 2.16
SPOCK3-222	ENST00000512681	CCDC136	Q96JN2	1154 aa		28.54	■■■□□ 2.16
SPOCK3-222	ENST00000512681	EP400	Q96L91	3159 aa		28.54	■■■□□ 2.16
SPOCK3-222	ENST00000512681	ZNF790	Q6PG37	636 aa		28.53	■■■□□ 2.16
SPOCK3-222	ENST00000512681	TSPYL4	Q9UJ04	414 aa		28.53	■■■□□ 2.16
SPOCK3-222	ENST00000512681	SMARCC1	Q92922	1105 aa	Predicted RBP	28.53	■■■□□ 2.16
SPOCK3-222	ENST00000512681	KCNQ3	O43525	872 aa		28.52	■■■□□ 2.16
SPOCK3-222	ENST00000512681	CANX	P27824	592 aa	Known RBP	28.52	■■■□□ 2.16
SPOCK3-222	ENST00000512681	UBR2	Q8IWV8	1755 aa		28.5	■■■□□ 2.15
SPOCK3-222	ENST00000512681	CCDC125	Q86Z20	511 aa		28.5	■■■□□ 2.15
SPOCK3-222	ENST00000512681	KCP	Q6ZWJ8	1503 aa		28.5	■■■□□ 2.15
SPOCK3-222	ENST00000512681	PALLD	Q8WX93	1383 aa		28.49	■■■□□ 2.15
SPOCK3-222	ENST00000512681	BRPF1	P55201	1214 aa	Predicted RBP	28.49	■■■□□ 2.15
SPOCK3-222	ENST00000512681	TTC5	Q8N0Z6	440 aa		28.49	■■■□□ 2.15
SPOCK3-222	ENST00000512681	APBA3	O96018	575 aa		28.48	■■■□□ 2.15
SPOCK3-222	ENST00000512681	SMC4	Q9NTJ3	1288 aa		28.48	■■■□□ 2.15
SPOCK3-222	ENST00000512681	PLSCR1	O15162	318 aa		28.47	■■■□□ 2.15
SPOCK3-222	ENST00000512681	MS4A1	P11836	297 aa		28.47	■■■□□ 2.15
SPOCK3-222	ENST00000512681	SSH1	Q8WYL5	1049 aa		28.47	■■■□□ 2.15
SPOCK3-222	ENST00000512681	KIF16B	Q96L93	1317 aa		28.47	■■■□□ 2.15
SPOCK3-222	ENST00000512681	VAMP4	O75379	141 aa		28.46	■■■□□ 2.15
SPOCK3-222	ENST00000512681	EIF4A1	P60842	406 aa	Known RBP	28.46	■■■□□ 2.15
SPOCK3-222	ENST00000512681	ZNF496	Q96IT1	587 aa	Predicted RBP	28.46	■■■□□ 2.15
SPOCK3-222	ENST00000512681	LY75	O60449	1722 aa		28.45	■■■□□ 2.15
SPOCK3-222	ENST00000512681	ZKSCAN2	Q63HK3	967 aa		28.45	■■■□□ 2.14
SPOCK3-222	ENST00000512681	FRAT1	Q92837	279 aa	Predicted RBP	28.45	■■■□□ 2.14
SPOCK3-222	ENST00000512681	UPF1	Q92900	1129 aa	Known RBP eCLIP	28.45	■■■□□ 2.14
SPOCK3-222	ENST00000512681	HEG1	Q9ULI3	1381 aa		28.45	■■■□□ 2.14
SPOCK3-222	ENST00000512681	PTCD1	O75127	700 aa	Known RBP	28.44	■■■□□ 2.14
SPOCK3-222	ENST00000512681	SF3B2	Q13435	895 aa	Known RBP	28.44	■■■□□ 2.14
SPOCK3-222	ENST00000512681	FMNL2	Q96PY5	1086 aa		28.44	■■■□□ 2.14
SPOCK3-222	ENST00000512681	BCL2L13	Q9BXK5	485 aa		28.44	■■■□□ 2.14
SPOCK3-222	ENST00000512681	RGPD3	A6NKT7	1758 aa	Predicted RBP	28.43	■■■□□ 2.14
SPOCK3-222	ENST00000512681	RGPD4	Q7Z3J3	1758 aa		28.43	■■■□□ 2.14
SPOCK3-222	ENST00000512681	AAMP	Q13685	434 aa		28.43	■■■□□ 2.14
SPOCK3-222	ENST00000512681	TWISTNB	Q3B726	338 aa	Predicted RBP	28.43	■■■□□ 2.14
SPOCK3-222	ENST00000512681	LOC102724428	A0A0B4J2F2	783 aa		28.42	■■■□□ 2.14
SPOCK3-222	ENST00000512681	SIK1	P57059	783 aa		28.42	■■■□□ 2.14
SPOCK3-222	ENST00000512681	SLC4A9	Q96Q91	983 aa		28.42	■■■□□ 2.14
SPOCK3-222	ENST00000512681	VSIG10	Q8N0Z9	540 aa		28.41	■■■□□ 2.14

Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms