RNA–Protein interactions for RNA: ENST00000512334.5

DDX41-214, Transcript of DEAD-box helicase 41, humanhuman

TSL 2

Gene DDX41, Length 686 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-214ENST00000512334 RBM42Q9BTD8 480 aaKnown RBP21.19■□□□□ 0.98
DDX41-214ENST00000512334 VIRMAQ69YN4 1812 aaKnown RBP21.19■□□□□ 0.98
DDX41-214ENST00000512334 MAP3K5Q99683 1374 aa21.19■□□□□ 0.98
DDX41-214ENST00000512334 GNAT3A8MTJ3 354 aa21.18■□□□□ 0.98
DDX41-214ENST00000512334 NEFMP07197 916 aa21.18■□□□□ 0.98
DDX41-214ENST00000512334 PRKRIP1Q9H875 184 aaPredicted RBP21.18■□□□□ 0.98
DDX41-214ENST00000512334 SLC52A2Q9HAB3 445 aa21.18■□□□□ 0.98
DDX41-214ENST00000512334 SRCAPQ6ZRS2 3230 aa21.17■□□□□ 0.98
DDX41-214ENST00000512334 ZBTB7AO95365 584 aa21.17■□□□□ 0.98
DDX41-214ENST00000512334 ATP6V1AP38606 617 aa21.17■□□□□ 0.98
DDX41-214ENST00000512334 SPON1Q9HCB6 807 aa21.17■□□□□ 0.98
DDX41-214ENST00000512334 TAF1LQ8IZX4 1826 aa21.17■□□□□ 0.98
DDX41-214ENST00000512334 AK7Q96M32 723 aa21.15■□□□□ 0.98
DDX41-214ENST00000512334 TUBGCP6Q96RT7 1819 aa21.15■□□□□ 0.98
DDX41-214ENST00000512334 MRC1P22897 1456 aa21.14■□□□□ 0.98
DDX41-214ENST00000512334 PNPLA7Q6ZV29 1317 aa21.14■□□□□ 0.97
DDX41-214ENST00000512334 PTCD1O75127 700 aaKnown RBP21.14■□□□□ 0.97
DDX41-214ENST00000512334 ATF5Q9Y2D1 282 aaPredicted RBP21.14■□□□□ 0.97
DDX41-214ENST00000512334 C4BP0C0L5 1744 aa21.14■□□□□ 0.97
DDX41-214ENST00000512334 ADAMTS7Q9UKP4 1686 aa21.14■□□□□ 0.97
DDX41-214ENST00000512334 QSER1Q2KHR3 1735 aa21.13■□□□□ 0.97
DDX41-214ENST00000512334 MSH5O43196 834 aa21.13■□□□□ 0.97
DDX41-214ENST00000512334 TEFQ10587 303 aa21.13■□□□□ 0.97
DDX41-214ENST00000512334 ITPK1Q13572 414 aa21.13■□□□□ 0.97
DDX41-214ENST00000512334 LINC00116Q8NCU8 138 aa21.13■□□□□ 0.97
DDX41-214ENST00000512334 PNNQ9H307 717 aaKnown RBP21.13■□□□□ 0.97
DDX41-214ENST00000512334 IL17REQ8NFR9 667 aa21.12■□□□□ 0.97
DDX41-214ENST00000512334 RTF1Q92541 710 aaKnown RBP21.12■□□□□ 0.97
DDX41-214ENST00000512334 MTFR1LQ9H019 292 aa21.12■□□□□ 0.97
DDX41-214ENST00000512334 PPP1R1BQ9UD71 204 aaPredicted RBP21.12■□□□□ 0.97
DDX41-214ENST00000512334 MAPK8IP3Q9UPT6 1336 aa21.11■□□□□ 0.97
DDX41-214ENST00000512334 SLC39A6Q13433 755 aa21.11■□□□□ 0.97
DDX41-214ENST00000512334 WDR43Q15061 677 aaKnown RBP eCLIP21.1■□□□□ 0.97
DDX41-214ENST00000512334 SLC4A9Q96Q91 983 aa21.1■□□□□ 0.97
DDX41-214ENST00000512334 PHF14O94880 888 aa21.09■□□□□ 0.97
DDX41-214ENST00000512334 PLEKHF1Q96S99 279 aa21.09■□□□□ 0.97
DDX41-214ENST00000512334 MCM10Q7L590 875 aa21.08■□□□□ 0.97
DDX41-214ENST00000512334 COL23A1Q86Y22 540 aaPredicted RBP21.08■□□□□ 0.97
DDX41-214ENST00000512334 ZNF831Q5JPB2 1677 aa21.08■□□□□ 0.96
DDX41-214ENST00000512334 GNPATO15228 680 aa21.07■□□□□ 0.96
DDX41-214ENST00000512334 TTC5Q8N0Z6 440 aa21.07■□□□□ 0.96
DDX41-214ENST00000512334 FLAD1Q8NFF5 587 aa21.07■□□□□ 0.96
DDX41-214ENST00000512334 SLC16A10Q8TF71 515 aa21.07■□□□□ 0.96
DDX41-214ENST00000512334 CEMIPQ8WUJ3 1361 aa21.07■□□□□ 0.96
DDX41-214ENST00000512334 DCTN1Q14203 1278 aa21.06■□□□□ 0.96
DDX41-214ENST00000512334 UBR3Q6ZT12 1888 aa21.05■□□□□ 0.96
DDX41-214ENST00000512334 ANP32CO43423 234 aa21.05■□□□□ 0.96
DDX41-214ENST00000512334 HTATSF1O43719 755 aaKnown RBP21.05■□□□□ 0.96
DDX41-214ENST00000512334 PTGER2P43116 358 aa21.05■□□□□ 0.96
DDX41-214ENST00000512334 SMIM5Q71RC9 77 aa21.05■□□□□ 0.96
DDX41-214ENST00000512334 COL5A3P25940 1745 aaPredicted RBP21.04■□□□□ 0.96
DDX41-214ENST00000512334 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP21.04■□□□□ 0.96
DDX41-214ENST00000512334 SSFA2P28290 1259 aa21.04■□□□□ 0.96
DDX41-214ENST00000512334 NFE2L2Q16236 605 aa21.04■□□□□ 0.96
DDX41-214ENST00000512334 AMIGO3Q86WK7 504 aa21.04■□□□□ 0.96
DDX41-214ENST00000512334 SIPA1L3O60292 1781 aaPredicted RBP21.04■□□□□ 0.96
DDX41-214ENST00000512334 BTBD11A6QL63 1104 aa21.03■□□□□ 0.96
DDX41-214ENST00000512334 CCDC146Q8IYE0 955 aa21.03■□□□□ 0.96
DDX41-214ENST00000512334 RTCBQ9Y3I0 505 aaKnown RBP21.03■□□□□ 0.96
DDX41-214ENST00000512334 DLG5Q8TDM6 1919 aa21.03■□□□□ 0.96
DDX41-214ENST00000512334 KCPQ6ZWJ8 1503 aa21.03■□□□□ 0.96
DDX41-214ENST00000512334 CNTNAP4Q9C0A0 1308 aa21.03■□□□□ 0.96
DDX41-214ENST00000512334 TJP1Q07157 1748 aa21.02■□□□□ 0.96
DDX41-214ENST00000512334 POLD1P28340 1107 aa21.02■□□□□ 0.96
DDX41-214ENST00000512334 RC3H1Q5TC82 1133 aaKnown RBP21.02■□□□□ 0.96
DDX41-214ENST00000512334 ZNF790Q6PG37 636 aa21.02■□□□□ 0.96
DDX41-214ENST00000512334 DNAJC10Q8IXB1 793 aa21.02■□□□□ 0.96
DDX41-214ENST00000512334 CRKLP46109 303 aaKnown RBP21.01■□□□□ 0.95
DDX41-214ENST00000512334 MSL1Q68DK7 614 aa21.01■□□□□ 0.95
DDX41-214ENST00000512334 ADAMTS8Q9UP79 889 aa21.01■□□□□ 0.95
DDX41-214ENST00000512334 UBR2Q8IWV8 1755 aa21■□□□□ 0.95
DDX41-214ENST00000512334 SGIP1Q9BQI5 828 aa21■□□□□ 0.95
DDX41-214ENST00000512334 CICQ96RK0 1608 aaPredicted RBP21■□□□□ 0.95
DDX41-214ENST00000512334 TRAPPC3LQ5T215 181 aa20.99■□□□□ 0.95
DDX41-214ENST00000512334 ZNF496Q96IT1 587 aaPredicted RBP20.99■□□□□ 0.95
DDX41-214ENST00000512334 ARXQ96QS3 562 aa20.99■□□□□ 0.95
DDX41-214ENST00000512334 MYH14Q7Z406 1995 aaKnown RBP20.98■□□□□ 0.95
DDX41-214ENST00000512334 KCNQ3O43525 872 aa20.98■□□□□ 0.95
DDX41-214ENST00000512334 RPS6KA4O75676 772 aa20.98■□□□□ 0.95
DDX41-214ENST00000512334 RIPK4P57078 832 aa20.98■□□□□ 0.95
DDX41-214ENST00000512334 VSIG10Q8N0Z9 540 aa20.98■□□□□ 0.95
DDX41-214ENST00000512334 RUNDC1Q96C34 613 aa20.98■□□□□ 0.95
DDX41-214ENST00000512334 TAF7Q15545 349 aaPredicted RBP20.97■□□□□ 0.95
DDX41-214ENST00000512334 FMNL2Q96PY5 1086 aa20.97■□□□□ 0.95
DDX41-214ENST00000512334 THUMPD2Q9BTF0 503 aaKnown RBP20.97■□□□□ 0.95
DDX41-214ENST00000512334 RRP7AQ9Y3A4 280 aaKnown RBP20.97■□□□□ 0.95
DDX41-214ENST00000512334 HEG1Q9ULI3 1381 aa20.97■□□□□ 0.95
DDX41-214ENST00000512334 ADRA2BP18089 450 aa20.96■□□□□ 0.95
DDX41-214ENST00000512334 TMPOP42166 694 aaKnown RBP20.96■□□□□ 0.95
DDX41-214ENST00000512334 NEUROD2Q15784 382 aa20.96■□□□□ 0.95
DDX41-214ENST00000512334 CCDC87Q9NVE4 849 aa20.96■□□□□ 0.95
DDX41-214ENST00000512334 CYP19A1P11511 503 aaPredicted RBP20.95■□□□□ 0.94
DDX41-214ENST00000512334 RFC4P35249 363 aa20.95■□□□□ 0.94
DDX41-214ENST00000512334 CCDC184Q52MB2 194 aa20.95■□□□□ 0.94
DDX41-214ENST00000512334 KLHL34Q8N239 644 aa20.95■□□□□ 0.94
DDX41-214ENST00000512334 ARHGEF1Q92888 912 aaKnown RBP20.95■□□□□ 0.94
DDX41-214ENST00000512334 COL24A1Q17RW2 1714 aa20.95■□□□□ 0.94
DDX41-214ENST00000512334 STARD3NLO95772 234 aa20.94■□□□□ 0.94
DDX41-214ENST00000512334 LMOD3Q0VAK6 560 aa20.94■□□□□ 0.94
DDX41-214ENST00000512334 INTS5Q6P9B9 1019 aaKnown RBP20.94■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms