RNA–Protein interactions for RNA: ENST00000512229.6

PCDHA4-202, Transcript of protocadherin alpha 4, humanhuman

TSL 1 (best) BASIC

Gene PCDHA4, Length 4,163 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA4-202ENST00000512229 PRDM15P57071 1507 aaPredicted RBP15.74■□□□□ 0.11
PCDHA4-202ENST00000512229 SNRPA1P09661 255 aaKnown RBP15.74■□□□□ 0.11
PCDHA4-202ENST00000512229 BMP2KLQ5H9B9 411 aa15.74■□□□□ 0.11
PCDHA4-202ENST00000512229 GLIPR1L2Q4G1C9 344 aa15.74■□□□□ 0.11
PCDHA4-202ENST00000512229 TRIM35Q9UPQ4 493 aa15.74■□□□□ 0.11
PCDHA4-202ENST00000512229 CYP46A1Q9Y6A2 500 aa15.74■□□□□ 0.11
PCDHA4-202ENST00000512229 A0A087WZG4 1122 aa15.73■□□□□ 0.11
PCDHA4-202ENST00000512229 PLXNC1O60486 1568 aa15.73■□□□□ 0.11
PCDHA4-202ENST00000512229 ERVK-7P63135 1459 aa15.73■□□□□ 0.11
PCDHA4-202ENST00000512229 FKBP4Q02790 459 aaKnown RBP eCLIP15.72■□□□□ 0.11
PCDHA4-202ENST00000512229 PPP1R42Q7Z4L9 355 aa15.72■□□□□ 0.11
PCDHA4-202ENST00000512229 HECW2Q9P2P5 1572 aa15.72■□□□□ 0.11
PCDHA4-202ENST00000512229 PDCP20941 246 aa15.72■□□□□ 0.11
PCDHA4-202ENST00000512229 CWC22Q9HCG8 908 aaKnown RBP15.72■□□□□ 0.11
PCDHA4-202ENST00000512229 CHPF2Q9P2E5 772 aa15.72■□□□□ 0.11
PCDHA4-202ENST00000512229 NCBP3Q53F19 620 aaKnown RBP15.72■□□□□ 0.11
PCDHA4-202ENST00000512229 BICD2Q8TD16 824 aa15.72■□□□□ 0.11
PCDHA4-202ENST00000512229 METP08581 1390 aa15.71■□□□□ 0.11
PCDHA4-202ENST00000512229 TRAK2O60296 914 aa15.71■□□□□ 0.11
PCDHA4-202ENST00000512229 ZCRB1Q8TBF4 217 aaKnown RBP15.71■□□□□ 0.11
PCDHA4-202ENST00000512229 DDX24Q9GZR7 859 aaKnown RBP eCLIP15.71■□□□□ 0.11
PCDHA4-202ENST00000512229 SLC39A6Q13433 755 aa15.71■□□□□ 0.11
PCDHA4-202ENST00000512229 ANKRD44Q8N8A2 993 aa15.71■□□□□ 0.11
PCDHA4-202ENST00000512229 NUCB1Q02818 461 aa15.71■□□□□ 0.1
PCDHA4-202ENST00000512229 SBNO1A3KN83 1393 aa15.71■□□□□ 0.1
PCDHA4-202ENST00000512229 ANKRD13DQ6ZTN6 518 aa15.7■□□□□ 0.1
PCDHA4-202ENST00000512229 ZBTB40Q9NUA8 1239 aa15.7■□□□□ 0.1
PCDHA4-202ENST00000512229 ZBTB3Q9H5J0 574 aa15.7■□□□□ 0.1
PCDHA4-202ENST00000512229 BLMP54132 1417 aaPredicted RBP15.7■□□□□ 0.1
PCDHA4-202ENST00000512229 TEX13AQ9BXU3 409 aaPredicted RBP15.69■□□□□ 0.1
PCDHA4-202ENST00000512229 BOLA2Q9H3K6 86 aa15.69■□□□□ 0.1
PCDHA4-202ENST00000512229 GNL3LQ9NVN8 582 aaKnown RBP15.69■□□□□ 0.1
PCDHA4-202ENST00000512229 RNF123Q5XPI4 1314 aa15.69■□□□□ 0.1
PCDHA4-202ENST00000512229 BLOC1S2Q6QNY1 142 aa15.69■□□□□ 0.1
PCDHA4-202ENST00000512229 NGLY1Q96IV0 654 aa15.69■□□□□ 0.1
PCDHA4-202ENST00000512229 MAP3K5Q99683 1374 aa15.69■□□□□ 0.1
PCDHA4-202ENST00000512229 BECN2A8MW95 431 aa15.68■□□□□ 0.1
PCDHA4-202ENST00000512229 ATP5J2-PTCD1G3V325 749 aa15.68■□□□□ 0.1
PCDHA4-202ENST00000512229 CCDC8Q9H0W5 538 aaPredicted RBP15.68■□□□□ 0.1
PCDHA4-202ENST00000512229 UBE3BQ7Z3V4 1068 aa15.68■□□□□ 0.1
PCDHA4-202ENST00000512229 FBXW7Q969H0 707 aa15.68■□□□□ 0.1
PCDHA4-202ENST00000512229 KAT6BQ8WYB5 2073 aa15.68■□□□□ 0.1
PCDHA4-202ENST00000512229 ZMYM4Q5VZL5 1548 aa15.68■□□□□ 0.1
PCDHA4-202ENST00000512229 FOSBP53539 338 aa15.68■□□□□ 0.1
PCDHA4-202ENST00000512229 CIZ1Q9ULV3 898 aaPredicted RBP15.68■□□□□ 0.1
PCDHA4-202ENST00000512229 EFCAB6Q5THR3 1501 aa15.68■□□□□ 0.1
PCDHA4-202ENST00000512229 ANKRD1Q15327 319 aa15.68■□□□□ 0.1
PCDHA4-202ENST00000512229 GOLGA6L19H0YKK7 550 aa15.67■□□□□ 0.1
PCDHA4-202ENST00000512229 CHL1O00533 1208 aa15.67■□□□□ 0.1
PCDHA4-202ENST00000512229 COPS6Q7L5N1 327 aa15.67■□□□□ 0.1
PCDHA4-202ENST00000512229 NFATC2IPQ8NCF5 419 aa15.67■□□□□ 0.1
PCDHA4-202ENST00000512229 MARCH6O60337 910 aa15.67■□□□□ 0.1
PCDHA4-202ENST00000512229 SAFBQ15424 915 aaKnown RBP eCLIP15.67■□□□□ 0.1
PCDHA4-202ENST00000512229 HSP90AB3PQ58FF7 597 aa15.67■□□□□ 0.1
PCDHA4-202ENST00000512229 TBC1D9Q6ZT07 1266 aa15.67■□□□□ 0.1
PCDHA4-202ENST00000512229 IQGAP3Q86VI3 1631 aa15.67■□□□□ 0.1
PCDHA4-202ENST00000512229 ARHGAP31Q2M1Z3 1444 aa15.67■□□□□ 0.1
PCDHA4-202ENST00000512229 SART3Q15020 963 aaKnown RBP15.67■□□□□ 0.1
PCDHA4-202ENST00000512229 METTL24Q5JXM2 366 aa15.67■□□□□ 0.1
PCDHA4-202ENST00000512229 JAKMIP1Q96N16 626 aaKnown RBP15.67■□□□□ 0.1
PCDHA4-202ENST00000512229 ECHDC1Q9NTX5 307 aa15.67■□□□□ 0.1
PCDHA4-202ENST00000512229 ABCC3O15438 1527 aa15.66■□□□□ 0.1
PCDHA4-202ENST00000512229 XAGE3Q8WTP9 111 aa15.66■□□□□ 0.1
PCDHA4-202ENST00000512229 UPF3BQ9BZI7 483 aaKnown RBP15.66■□□□□ 0.1
PCDHA4-202ENST00000512229 IFIT5Q13325 482 aaKnown RBP15.66■□□□□ 0.1
PCDHA4-202ENST00000512229 ZSCAN25Q6NSZ9 544 aa15.66■□□□□ 0.1
PCDHA4-202ENST00000512229 KSR2Q6VAB6 950 aa15.66■□□□□ 0.1
PCDHA4-202ENST00000512229 AKAP2Q9Y2D5 859 aa15.66■□□□□ 0.1
PCDHA4-202ENST00000512229 KDM5AP29375 1690 aaKnown RBP15.66■□□□□ 0.1
PCDHA4-202ENST00000512229 SMC5Q8IY18 1101 aa15.66■□□□□ 0.1
PCDHA4-202ENST00000512229 TET3O43151 1660 aa15.66■□□□□ 0.1
PCDHA4-202ENST00000512229 PRPF40AO75400 957 aaKnown RBP15.65■□□□□ 0.1
PCDHA4-202ENST00000512229 MBD3O95983 291 aa15.65■□□□□ 0.1
PCDHA4-202ENST00000512229 ZNF652Q9Y2D9 606 aa15.65■□□□□ 0.1
PCDHA4-202ENST00000512229 DHX16O60231 1041 aaKnown RBP15.65■□□□□ 0.1
PCDHA4-202ENST00000512229 ALDH1L1O75891 902 aa15.65■□□□□ 0.1
PCDHA4-202ENST00000512229 TRMT112Q9UI30 125 aaKnown RBP15.65■□□□□ 0.1
PCDHA4-202ENST00000512229 KRT32Q14532 448 aa15.65■□□□□ 0.1
PCDHA4-202ENST00000512229 BICDL1Q6ZP65 573 aa15.65■□□□□ 0.1
PCDHA4-202ENST00000512229 RHPN1Q8TCX5 695 aa15.65■□□□□ 0.1
PCDHA4-202ENST00000512229 TSPOAP1O95153 1857 aa15.64■□□□□ 0.09
PCDHA4-202ENST00000512229 IGHMBP2P38935 993 aaKnown RBP15.64■□□□□ 0.09
PCDHA4-202ENST00000512229 TTC22Q5TAA0 569 aa15.64■□□□□ 0.09
PCDHA4-202ENST00000512229 ATP8B2P98198 1209 aa15.64■□□□□ 0.09
PCDHA4-202ENST00000512229 CCDC73Q6ZRK6 1079 aa15.64■□□□□ 0.09
PCDHA4-202ENST00000512229 CWC25Q9NXE8 425 aaPredicted RBP15.64■□□□□ 0.09
PCDHA4-202ENST00000512229 CLASP1Q7Z460 1538 aa15.64■□□□□ 0.09
PCDHA4-202ENST00000512229 PLEKHG1Q9ULL1 1385 aa15.64■□□□□ 0.09
PCDHA4-202ENST00000512229 TRIM34Q9BYJ4 488 aa15.64■□□□□ 0.09
PCDHA4-202ENST00000512229 TBC1D2Q9BYX2 928 aa15.64■□□□□ 0.09
PCDHA4-202ENST00000512229 CTNNA3Q9UI47 895 aa15.64■□□□□ 0.09
PCDHA4-202ENST00000512229 CDC42BPBQ9Y5S2 1711 aa15.64■□□□□ 0.09
PCDHA4-202ENST00000512229 SOS1Q07889 1333 aaPredicted RBP15.63■□□□□ 0.09
PCDHA4-202ENST00000512229 ZBTB7BO15156 539 aaPredicted RBP15.63■□□□□ 0.09
PCDHA4-202ENST00000512229 GPTP24298 496 aa15.63■□□□□ 0.09
PCDHA4-202ENST00000512229 LINS1Q8NG48 757 aa15.63■□□□□ 0.09
PCDHA4-202ENST00000512229 TBC1D32Q96NH3 1257 aa15.63■□□□□ 0.09
PCDHA4-202ENST00000512229 NACAP1Q9BZK3 213 aa15.63■□□□□ 0.09
PCDHA4-202ENST00000512229 DCTPP1Q9H773 170 aa15.63■□□□□ 0.09
PCDHA4-202ENST00000512229 PDRG1Q9NUG6 133 aa15.63■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms